RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 RAB3IPQ96QF0 476 aaPredicted RBP20.94■□□□□ 0.94
SOX2-201ENST00000325404 SMC6Q96SB8 1091 aa20.94■□□□□ 0.94
SOX2-201ENST00000325404 PPME1Q9Y570 386 aa20.94■□□□□ 0.94
SOX2-201ENST00000325404 USH1CQ9Y6N9 552 aa20.94■□□□□ 0.94
SOX2-201ENST00000325404 PTPRFP10586 1907 aa20.94■□□□□ 0.94
SOX2-201ENST00000325404 SRCAPQ6ZRS2 3230 aa20.94■□□□□ 0.94
SOX2-201ENST00000325404 SMAPO00193 183 aa20.94■□□□□ 0.94
SOX2-201ENST00000325404 GJC1P36383 396 aa20.94■□□□□ 0.94
SOX2-201ENST00000325404 SURF1Q15526 300 aa20.94■□□□□ 0.94
SOX2-201ENST00000325404 PARP6Q2NL67 630 aa20.94■□□□□ 0.94
SOX2-201ENST00000325404 ATP13A4Q4VNC1 1196 aa20.94■□□□□ 0.94
SOX2-201ENST00000325404 GLIS1Q8NBF1 620 aa20.94■□□□□ 0.94
SOX2-201ENST00000325404 GGT7Q9UJ14 662 aa20.94■□□□□ 0.94
SOX2-201ENST00000325404 A0A0G2JLL6 359 aaPredicted RBP20.93■□□□□ 0.94
SOX2-201ENST00000325404 PI4K2BG5E9Z4 385 aa20.93■□□□□ 0.94
SOX2-201ENST00000325404 ATF7P17544 494 aaPredicted RBP20.93■□□□□ 0.94
SOX2-201ENST00000325404 MSH2P43246 934 aa20.93■□□□□ 0.94
SOX2-201ENST00000325404 MOGSQ13724 837 aa20.93■□□□□ 0.94
SOX2-201ENST00000325404 SETDB1Q15047 1291 aa20.93■□□□□ 0.94
SOX2-201ENST00000325404 ZBTB41Q5SVQ8 909 aa20.93■□□□□ 0.94
SOX2-201ENST00000325404 PRRT2Q7Z6L0 340 aaPredicted RBP20.93■□□□□ 0.94
SOX2-201ENST00000325404 PSMC3IPQ9P2W1 217 aaPredicted RBP20.93■□□□□ 0.94
SOX2-201ENST00000325404 PNMA3Q9UL41 463 aa20.93■□□□□ 0.94
SOX2-201ENST00000325404 GLTPD2A6NH11 291 aa20.93■□□□□ 0.94
SOX2-201ENST00000325404 SPDYE5A6NIY4 337 aa20.93■□□□□ 0.94
SOX2-201ENST00000325404 CXCL11O14625 94 aa20.93■□□□□ 0.94
SOX2-201ENST00000325404 ADCY3O60266 1144 aa20.93■□□□□ 0.94
SOX2-201ENST00000325404 KRT16P08779 473 aa20.93■□□□□ 0.94
SOX2-201ENST00000325404 TSHRP16473 764 aa20.93■□□□□ 0.94
SOX2-201ENST00000325404 GPR162Q16538 588 aa20.93■□□□□ 0.94
SOX2-201ENST00000325404 EFHC2Q5JST6 749 aa20.93■□□□□ 0.94
SOX2-201ENST00000325404 KAZNQ674X7 775 aa20.93■□□□□ 0.94
SOX2-201ENST00000325404 DCUN1D2Q6PH85 259 aa20.93■□□□□ 0.94
SOX2-201ENST00000325404 MOB2Q70IA6 237 aa20.93■□□□□ 0.94
SOX2-201ENST00000325404 TTC13Q8NBP0 860 aa20.93■□□□□ 0.94
SOX2-201ENST00000325404 PRCCQ92733 491 aaPredicted RBP20.93■□□□□ 0.94
SOX2-201ENST00000325404 NOP53Q9NZM5 478 aaKnown RBP20.93■□□□□ 0.94
SOX2-201ENST00000325404 STRIP2Q9ULQ0 834 aa20.93■□□□□ 0.94
SOX2-201ENST00000325404 FARP1Q9Y4F1 1045 aaPredicted RBP20.93■□□□□ 0.94
SOX2-201ENST00000325404 MYH9P35579 1960 aaKnown RBP20.92■□□□□ 0.94
SOX2-201ENST00000325404 EFNA5P52803 228 aa20.92■□□□□ 0.94
SOX2-201ENST00000325404 TARBP2Q15633 366 aaKnown RBP20.92■□□□□ 0.94
SOX2-201ENST00000325404 WDR72Q3MJ13 1102 aa20.92■□□□□ 0.94
SOX2-201ENST00000325404 SEPT14Q6ZU15 432 aa20.92■□□□□ 0.94
SOX2-201ENST00000325404 PRUNE1Q86TP1 453 aa20.92■□□□□ 0.94
SOX2-201ENST00000325404 GPATCH11Q8N954 259 aa20.92■□□□□ 0.94
SOX2-201ENST00000325404 ANKLE1Q8NAG6 615 aa20.92■□□□□ 0.94
SOX2-201ENST00000325404 DNERQ8NFT8 737 aa20.92■□□□□ 0.94
SOX2-201ENST00000325404 AGAP11Q8TF27 550 aa20.92■□□□□ 0.94
SOX2-201ENST00000325404 MCEEQ96PE7 176 aa20.92■□□□□ 0.94
SOX2-201ENST00000325404 NIF3L1Q9GZT8 377 aa20.92■□□□□ 0.94
SOX2-201ENST00000325404 PHTF1Q9UMS5 762 aa20.92■□□□□ 0.94
SOX2-201ENST00000325404 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.92■□□□□ 0.94
SOX2-201ENST00000325404 F8VP50 259 aa20.92■□□□□ 0.94
SOX2-201ENST00000325404 TYROBPO43914 113 aa20.92■□□□□ 0.94
SOX2-201ENST00000325404 EDF1O60869 148 aaKnown RBP20.92■□□□□ 0.94
SOX2-201ENST00000325404 DCTN3O75935 186 aa20.92■□□□□ 0.94
SOX2-201ENST00000325404 TCF4P15884 667 aa20.92■□□□□ 0.94
SOX2-201ENST00000325404 ALDH3A1P30838 453 aa20.92■□□□□ 0.94
SOX2-201ENST00000325404 LACTBP83111 547 aaPredicted RBP20.92■□□□□ 0.94
SOX2-201ENST00000325404 SP4Q02446 784 aa20.92■□□□□ 0.94
SOX2-201ENST00000325404 STXBP2Q15833 593 aa20.92■□□□□ 0.94
SOX2-201ENST00000325404 SGSM1Q2NKQ1 1148 aa20.92■□□□□ 0.94
SOX2-201ENST00000325404 TMEM237Q96Q45 408 aa20.92■□□□□ 0.94
SOX2-201ENST00000325404 ANKFY1Q9P2R3 1169 aa20.92■□□□□ 0.94
SOX2-201ENST00000325404 SP2Q02086 613 aa20.91■□□□□ 0.94
SOX2-201ENST00000325404 TAZQ16635 292 aa20.91■□□□□ 0.94
SOX2-201ENST00000325404 FNIP1Q8TF40 1166 aa20.91■□□□□ 0.94
SOX2-201ENST00000325404 LRMDAQ9H2I8 198 aa20.91■□□□□ 0.94
SOX2-201ENST00000325404 NRBP2Q9NSY0 501 aa20.91■□□□□ 0.94
SOX2-201ENST00000325404 C15orf41Q9Y2V0 281 aa20.91■□□□□ 0.94
SOX2-201ENST00000325404 FAM189A1O60320 539 aa20.91■□□□□ 0.94
SOX2-201ENST00000325404 ZSCAN5DPP0CG00 497 aa20.91■□□□□ 0.94
SOX2-201ENST00000325404 KRT15P19012 456 aa20.91■□□□□ 0.94
SOX2-201ENST00000325404 PHBP35232 272 aa20.91■□□□□ 0.94
SOX2-201ENST00000325404 SLC8A3P57103 927 aa20.91■□□□□ 0.94
SOX2-201ENST00000325404 OGDHQ02218 1023 aa20.91■□□□□ 0.94
SOX2-201ENST00000325404 PKN2Q16513 984 aaKnown RBP20.91■□□□□ 0.94
SOX2-201ENST00000325404 ZFYVE27Q5T4F4 411 aa20.91■□□□□ 0.94
SOX2-201ENST00000325404 ZNF398Q8TD17 642 aa20.91■□□□□ 0.94
SOX2-201ENST00000325404 N4BP2L2Q92802 583 aaPredicted RBP20.91■□□□□ 0.94
SOX2-201ENST00000325404 INPP5DQ92835 1189 aa20.91■□□□□ 0.94
SOX2-201ENST00000325404 TBC1D31Q96DN5 1066 aa20.91■□□□□ 0.94
SOX2-201ENST00000325404 VPS37BQ9H9H4 285 aa20.91■□□□□ 0.94
SOX2-201ENST00000325404 KLHL11Q9NVR0 708 aa20.91■□□□□ 0.94
SOX2-201ENST00000325404 BTBD7Q9P203 1132 aa20.91■□□□□ 0.94
SOX2-201ENST00000325404 CEP83Q9Y592 693 aa20.91■□□□□ 0.94
SOX2-201ENST00000325404 IQCA1LA6NCM1 817 aa20.9■□□□□ 0.94
SOX2-201ENST00000325404 C3orf70A6NLC5 250 aaPredicted RBP20.9■□□□□ 0.94
SOX2-201ENST00000325404 ZWINTO95229 277 aa20.9■□□□□ 0.94
SOX2-201ENST00000325404 GEMIN4P57678 1058 aaKnown RBP20.9■□□□□ 0.94
SOX2-201ENST00000325404 ERICH1Q86X53 443 aa20.9■□□□□ 0.94
SOX2-201ENST00000325404 RIOX2Q8IUF8 465 aa20.9■□□□□ 0.94
SOX2-201ENST00000325404 PPIL6Q8IXY8 311 aa20.9■□□□□ 0.94
SOX2-201ENST00000325404 AGGF1Q8N302 714 aaeCLIP20.9■□□□□ 0.94
SOX2-201ENST00000325404 RSRC1Q96IZ7 334 aaKnown RBP20.9■□□□□ 0.94
SOX2-201ENST00000325404 ANKRD27Q96NW4 1050 aa20.9■□□□□ 0.94
SOX2-201ENST00000325404 ZMYND8Q9ULU4 1186 aaPredicted RBP20.9■□□□□ 0.94
SOX2-201ENST00000325404 KCNH4Q9UQ05 1017 aa20.9■□□□□ 0.94
SOX2-201ENST00000325404 POC1B-GALNT4F8VUJ3 575 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms