RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 B3GNT9Q6UX72 402 aa18.78■□□□□ 0.6
PRKCB-202ENST00000321728 ENOSF1Q7L5Y1 443 aa18.78■□□□□ 0.6
PRKCB-202ENST00000321728 RHPN2Q8IUC4 686 aa18.78■□□□□ 0.6
PRKCB-202ENST00000321728 FAM111AQ96PZ2 611 aa18.78■□□□□ 0.6
PRKCB-202ENST00000321728 NMUR2Q9GZQ4 415 aa18.78■□□□□ 0.6
PRKCB-202ENST00000321728 ASCC2Q9H1I8 757 aaPredicted RBP18.78■□□□□ 0.6
PRKCB-202ENST00000321728 DMAP1Q9NPF5 467 aaPredicted RBP18.78■□□□□ 0.6
PRKCB-202ENST00000321728 RBBP6Q7Z6E9 1792 aaKnown RBP18.78■□□□□ 0.6
PRKCB-202ENST00000321728 FAM237BA0A1B0GVD1 139 aa18.78■□□□□ 0.6
PRKCB-202ENST00000321728 DSG1Q02413 1049 aa18.78■□□□□ 0.6
PRKCB-202ENST00000321728 KLHL38Q2WGJ6 581 aa18.78■□□□□ 0.6
PRKCB-202ENST00000321728 USP37Q86T82 979 aa18.78■□□□□ 0.6
PRKCB-202ENST00000321728 ALYREFQ86V81 257 aaKnown RBP18.78■□□□□ 0.6
PRKCB-202ENST00000321728 ZNF677Q86XU0 584 aa18.78■□□□□ 0.6
PRKCB-202ENST00000321728 PALM2Q8IXS6 379 aa18.78■□□□□ 0.6
PRKCB-202ENST00000321728 ALKBH8Q96BT7 664 aaKnown RBP18.78■□□□□ 0.6
PRKCB-202ENST00000321728 TUBGCP5Q96RT8 1024 aa18.78■□□□□ 0.6
PRKCB-202ENST00000321728 CYTH2Q99418 400 aa18.78■□□□□ 0.6
PRKCB-202ENST00000321728 TTC1Q99614 292 aa18.78■□□□□ 0.6
PRKCB-202ENST00000321728 TBX20Q9UMR3 447 aa18.78■□□□□ 0.6
PRKCB-202ENST00000321728 DENND3A2RUS2 1198 aa18.77■□□□□ 0.6
PRKCB-202ENST00000321728 CYP1A1P04798 512 aaPredicted RBP18.77■□□□□ 0.6
PRKCB-202ENST00000321728 ENO1P06733 434 aaKnown RBP18.77■□□□□ 0.6
PRKCB-202ENST00000321728 ANPEPP15144 967 aa18.77■□□□□ 0.6
PRKCB-202ENST00000321728 VCPP55072 806 aaKnown RBP18.77■□□□□ 0.6
PRKCB-202ENST00000321728 CNPY1Q3B7I2 92 aa18.77■□□□□ 0.6
PRKCB-202ENST00000321728 MSS51Q4VC12 460 aa18.77■□□□□ 0.6
PRKCB-202ENST00000321728 MDH1BQ5I0G3 518 aa18.77■□□□□ 0.6
PRKCB-202ENST00000321728 C6orf163Q5TEZ5 329 aa18.77■□□□□ 0.6
PRKCB-202ENST00000321728 SESTD1Q86VW0 696 aa18.77■□□□□ 0.6
PRKCB-202ENST00000321728 CIB2O75838 187 aa18.77■□□□□ 0.6
PRKCB-202ENST00000321728 MCL1Q07820 350 aa18.77■□□□□ 0.6
PRKCB-202ENST00000321728 VPS72Q15906 364 aa18.77■□□□□ 0.6
PRKCB-202ENST00000321728 LRRC23Q53EV4 343 aaPredicted RBP18.77■□□□□ 0.6
PRKCB-202ENST00000321728 FNBP1LQ5T0N5 605 aa18.77■□□□□ 0.6
PRKCB-202ENST00000321728 DRICH1Q6PGQ1 229 aaPredicted RBP18.77■□□□□ 0.6
PRKCB-202ENST00000321728 ARHGAP18Q8N392 663 aa18.77■□□□□ 0.6
PRKCB-202ENST00000321728 FNBP1Q96RU3 617 aa18.77■□□□□ 0.6
PRKCB-202ENST00000321728 RIT2Q99578 217 aa18.77■□□□□ 0.6
PRKCB-202ENST00000321728 TMX4Q9H1E5 349 aaPredicted RBP18.77■□□□□ 0.6
PRKCB-202ENST00000321728 ACSS3Q9H6R3 686 aa18.77■□□□□ 0.6
PRKCB-202ENST00000321728 TDRD3Q9H7E2 651 aaKnown RBP18.77■□□□□ 0.6
PRKCB-202ENST00000321728 RANBP1P43487 201 aa18.77■□□□□ 0.59
PRKCB-202ENST00000321728 BPIFB4P59827 614 aa18.77■□□□□ 0.59
PRKCB-202ENST00000321728 PRKD1Q15139 912 aaPredicted RBP18.77■□□□□ 0.59
PRKCB-202ENST00000321728 ANKRD22Q5VYY1 191 aa18.77■□□□□ 0.59
PRKCB-202ENST00000321728 ARMC3Q5W041 872 aa18.77■□□□□ 0.59
PRKCB-202ENST00000321728 LMBRD2Q68DH5 695 aaPredicted RBP18.77■□□□□ 0.59
PRKCB-202ENST00000321728 TATDN1Q6P1N9 297 aa18.77■□□□□ 0.59
PRKCB-202ENST00000321728 FBXO36Q8NEA4 188 aa18.77■□□□□ 0.59
PRKCB-202ENST00000321728 FBXO27Q8NI29 283 aa18.77■□□□□ 0.59
PRKCB-202ENST00000321728 MZB1Q8WU39 189 aa18.77■□□□□ 0.59
PRKCB-202ENST00000321728 CLPTM1LQ96KA5 538 aa18.77■□□□□ 0.59
PRKCB-202ENST00000321728 SENP7Q9BQF6 1050 aa18.77■□□□□ 0.59
PRKCB-202ENST00000321728 NDE1Q9NXR1 346 aa18.77■□□□□ 0.59
PRKCB-202ENST00000321728 DDX43Q9NXZ2 648 aaKnown RBP18.77■□□□□ 0.59
PRKCB-202ENST00000321728 DRG1Q9Y295 367 aaKnown RBP18.77■□□□□ 0.59
PRKCB-202ENST00000321728 SCINQ9Y6U3 715 aa18.77■□□□□ 0.59
PRKCB-202ENST00000321728 IVNS1ABPQ9Y6Y0 642 aa18.77■□□□□ 0.59
PRKCB-202ENST00000321728 PLSCR1O15162 318 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 TGDSO95455 350 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 YWHABP31946 246 aaKnown RBP18.76■□□□□ 0.59
PRKCB-202ENST00000321728 RPL7AP62424 266 aaKnown RBP18.76■□□□□ 0.59
PRKCB-202ENST00000321728 CYP24A1Q07973 514 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 ZC3H12AQ5D1E8 599 aaKnown RBP18.76■□□□□ 0.59
PRKCB-202ENST00000321728 RIPOR1Q6ZS17 1223 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.76■□□□□ 0.59
PRKCB-202ENST00000321728 FEZF2Q8TBJ5 459 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 TMC2Q8TDI7 906 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 DCAKDQ8WVC6 231 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 C10orf88Q9H8K7 445 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 PCDH9Q9HC56 1237 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 GINM1Q9NU53 330 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 USP21Q9UK80 565 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 ZNF831Q5JPB2 1677 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 IRF6O14896 467 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 PYGLP06737 847 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 RAP1GDS1P52306 607 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 NCKAP1LP55160 1127 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 KDSRQ06136 332 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 OASLQ15646 514 aaKnown RBP18.76■□□□□ 0.59
PRKCB-202ENST00000321728 AOC3Q16853 763 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 BBS9Q3SYG4 887 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 SPOCD1Q6ZMY3 1216 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 TMPRSS6Q8IU80 811 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 SCUBE1Q8IWY4 988 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 ECSITQ9BQ95 431 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 MXRA8Q9BRK3 442 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 SPATA16Q9BXB7 569 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 VCX3BQ9H321 246 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 ST6GALNAC4Q9H4F1 302 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 VCX3AQ9NNX9 186 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 ARHGEF4Q9NR80 690 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 IP6K2Q9UHH9 426 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 IKBKGQ9Y6K9 419 aa18.76■□□□□ 0.59
PRKCB-202ENST00000321728 F8W8V4 182 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 POLRMTO00411 1230 aaKnown RBP18.75■□□□□ 0.59
PRKCB-202ENST00000321728 ITGB5P18084 799 aa18.75■□□□□ 0.59
PRKCB-202ENST00000321728 QARSP47897 775 aaKnown RBP18.75■□□□□ 0.59
PRKCB-202ENST00000321728 RTP1P59025 263 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms