RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 MAK16Q9BXY0 300 aaKnown RBP9.17□□□□□ -0.94
CLK1-201ENST00000321356 FRMD8P1Q9BZ68 369 aaPredicted RBP9.17□□□□□ -0.94
CLK1-201ENST00000321356 BATF3Q9NR55 127 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 SLC5A4Q9NY91 659 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 CYP39A1Q9NYL5 469 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 ANKFY1Q9P2R3 1169 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 RABGEF1Q9UJ41 708 aa9.17□□□□□ -0.94
CLK1-201ENST00000321356 ZMYND8Q9ULU4 1186 aaPredicted RBP9.17□□□□□ -0.94
CLK1-201ENST00000321356 SSC5DA1L4H1 1573 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 IGKV6D-21A0A0A0MT36 114 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 A0A1W2PPM1 405 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 LRRD1A4D1F6 860 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 LRRIQ4A6NIV6 560 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 E7ESA3 106 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 HGSO14964 777 aaPredicted RBP9.16□□□□□ -0.94
CLK1-201ENST00000321356 ATP2A1O14983 1001 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 DIAPH2O60879 1101 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 ZWINTO95229 277 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 CST3P01034 146 aaPredicted RBP9.16□□□□□ -0.94
CLK1-201ENST00000321356 ATP2A2P16615 1042 aaKnown RBP9.16□□□□□ -0.94
CLK1-201ENST00000321356 EIF4BP23588 611 aaKnown RBP9.16□□□□□ -0.94
CLK1-201ENST00000321356 ALDH3A1P30838 453 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 GEMIN4P57678 1058 aaKnown RBP9.16□□□□□ -0.94
CLK1-201ENST00000321356 SP2Q02086 613 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 TNFAIP1Q13829 316 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 GNPTABQ3T906 1256 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 SLC45A4Q5BKX6 768 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 DCUN1D2Q6PH85 259 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 ZPBP2Q6X784 338 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 PCGF5Q86SE9 256 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 VSIG1Q86XK7 387 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 WDR49Q8IV35 697 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 ZNF276Q8N554 614 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 WDTC1Q8N5D0 677 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 ZNF75CPQ92670 426 aaPredicted RBP9.16□□□□□ -0.94
CLK1-201ENST00000321356 ACSF2Q96CM8 615 aaPredicted RBP9.16□□□□□ -0.94
CLK1-201ENST00000321356 SLC7A6OSQ96CW6 309 aaPredicted RBP9.16□□□□□ -0.94
CLK1-201ENST00000321356 THOC1Q96FV9 657 aaKnown RBP9.16□□□□□ -0.94
CLK1-201ENST00000321356 ANKRD27Q96NW4 1050 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 WDR83Q9BRX9 315 aaKnown RBP9.16□□□□□ -0.94
CLK1-201ENST00000321356 TMEM121Q9BTD3 319 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 NIFKQ9BYG3 293 aaKnown RBP9.16□□□□□ -0.94
CLK1-201ENST00000321356 IMPG2Q9BZV3 1241 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 MAF1Q9H063 256 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 PCDHGC3Q9UN70 934 aa9.16□□□□□ -0.94
CLK1-201ENST00000321356 SCAF8Q9UPN6 1271 aaKnown RBP9.16□□□□□ -0.94
CLK1-201ENST00000321356 SGK1O00141 431 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 C2CD2LO14523 706 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 GNAZP19086 355 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 BRD2P25440 801 aaKnown RBP9.15□□□□□ -0.94
CLK1-201ENST00000321356 TARSP26639 723 aaKnown RBP9.15□□□□□ -0.94
CLK1-201ENST00000321356 ICAM3P32942 547 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 CTCFP49711 727 aaPredicted RBP9.15□□□□□ -0.94
CLK1-201ENST00000321356 BACE1P56817 501 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 ZNF280AP59817 542 aaPredicted RBP9.15□□□□□ -0.94
CLK1-201ENST00000321356 SLC25A11Q02978 314 aaKnown RBP9.15□□□□□ -0.94
CLK1-201ENST00000321356 CAPSQ13938 189 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 TARBP2Q15633 366 aaKnown RBP9.15□□□□□ -0.94
CLK1-201ENST00000321356 MSS51Q4VC12 460 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 HP1BP3Q5SSJ5 553 aaPredicted RBP9.15□□□□□ -0.94
CLK1-201ENST00000321356 HHATQ5VTY9 493 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 GPAT2Q6NUI2 795 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 ADGRD1Q6QNK2 874 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 BBS12Q6ZW61 710 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 OTOAQ7RTW8 1153 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 PPIL6Q8IXY8 311 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 NIM1KQ8IY84 436 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 NAT8LQ8N9F0 302 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 ATP11CQ8NB49 1132 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 SLC7A3Q8WY07 619 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 CPT1BQ92523 772 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 HAUS1Q96CS2 278 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 C12orf42Q96LP6 360 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 NIF3L1Q9GZT8 377 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 ACSS3Q9H6R3 686 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 TLE6Q9H808 572 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 ZNF302Q9NR11 478 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 CISHQ9NSE2 258 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 SUFUQ9UMX1 484 aa9.15□□□□□ -0.94
CLK1-201ENST00000321356 RPL26L1Q9UNX3 145 aaKnown RBP9.15□□□□□ -0.94
CLK1-201ENST00000321356 TTLL13PA6NNM8 815 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 ADCY3O60266 1144 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 PEX11AO75192 247 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 BANF1O75531 89 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 TSHRP16473 764 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 KRT4P19013 534 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 KCNA3P22001 575 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 PHBP35232 272 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 RFC5P40937 340 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 ARL4CP56559 192 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 OTUD4Q01804 1114 aaKnown RBP9.15□□□□□ -0.95
CLK1-201ENST00000321356 GAD2Q05329 585 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 TFDP1Q14186 410 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 TMEM132BQ14DG7 1078 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 SEZ6Q53EL9 994 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 ANKRD20A2Q5SQ80 823 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 ZFYVE27Q5T4F4 411 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 ANKRD20A1Q5TYW2 823 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 ANKRD20A3Q5VUR7 823 aa9.15□□□□□ -0.95
CLK1-201ENST00000321356 ANKRD22Q5VYY1 191 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms