RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 GJA3Q9Y6H8 435 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 NFIBO00712 420 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 ATP9AO75110 1047 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 TRPA1O75762 1119 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 APBA3O96018 575 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 BGNP21810 368 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 SERPINB3P29508 390 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 PTDSS1P48651 473 aaKnown RBP13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 SOX10P56693 466 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 GTF2BQ00403 316 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 SPIRE1Q08AE8 756 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 TTLL12Q14166 644 aaPredicted RBP13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 KPNB1Q14974 876 aaKnown RBP13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 RASA2Q15283 850 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 SHROOM1Q2M3G4 852 aaPredicted RBP13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 VCPIP1Q96JH7 1222 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 AGO4Q9HCK5 861 aaKnown RBP13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 WDR35Q9P2L0 1181 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 CREB3O43889 395 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 ARL4AP40617 200 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 PRKG1Q13976 671 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 EMC2Q15006 297 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 CHI3L2Q15782 390 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 CYP1B1Q16678 543 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 SPRED3Q2MJR0 410 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 NBPF20Q3BBV1 942 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 FSCBQ5H9T9 825 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 NDUFAF2Q8N183 169 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 C12orf50Q8NA57 414 aaPredicted RBP13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 FAM151AQ8WW52 585 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 PRMT6Q96LA8 375 aaPredicted RBP13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 APOL6Q9BWW8 343 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 MRPL4Q9BYD3 311 aaKnown RBP13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 VPS11Q9H270 941 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 LRMDAQ9H2I8 198 aa13.35□□□□□ -0.27
DNMT3A-202ENST00000321117 WDR46O15213 610 aaKnown RBP13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 EDF1O60869 148 aaKnown RBP13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 NOL3O60936 208 aaKnown RBP13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 SLC34A1Q06495 639 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 TTC39BQ5VTQ0 682 aaPredicted RBP13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 NLRP7Q8WX94 980 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 IDI2Q9BXS1 227 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 TTLL3Q9Y4R7 772 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 TRPM3Q9HCF6 1732 aaPredicted RBP13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 SYNJ2BP-COX16A0A087WUM0 186 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 CASQ2O14958 399 aaPredicted RBP13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 WFS1O76024 890 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 ZCCHC18P0CG32 403 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 ETS1P14921 441 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 DBN1Q16643 649 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 SGSM1Q2NKQ1 1148 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 ZNF568Q3ZCX4 644 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 VSTM1Q6UX27 236 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 RAPH1Q70E73 1250 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 MAP4K3Q8IVH8 894 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 FAM149B1Q96BN6 582 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 NIF3L1Q9GZT8 377 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 COX16Q9P0S2 106 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 IVNS1ABPQ9Y6Y0 642 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 CICQ96RK0 1608 aaPredicted RBP13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 GEN1Q17RS7 908 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 WDR72Q3MJ13 1102 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 CPNE8Q86YQ8 564 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 DNAAF3Q8N9W5 541 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 ICA1LQ8NDH6 482 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 FAM13CQ8NE31 585 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 SEMA4DQ92854 862 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 ARHGEF3Q9NR81 526 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 NUP98P52948 1817 aa13.34□□□□□ -0.27
DNMT3A-202ENST00000321117 FCHO1O14526 889 aa13.33□□□□□ -0.27
DNMT3A-202ENST00000321117 PYGBP11216 843 aa13.33□□□□□ -0.27
DNMT3A-202ENST00000321117 SLC12A2P55011 1212 aa13.33□□□□□ -0.27
DNMT3A-202ENST00000321117 IGBP1P78318 339 aa13.33□□□□□ -0.27
DNMT3A-202ENST00000321117 IRGCQ6NXR0 463 aa13.33□□□□□ -0.27
DNMT3A-202ENST00000321117 LRRC74BQ6ZQY2 392 aa13.33□□□□□ -0.27
DNMT3A-202ENST00000321117 ANO5Q75V66 913 aa13.33□□□□□ -0.27
DNMT3A-202ENST00000321117 EEPD1Q7L9B9 569 aa13.33□□□□□ -0.27
DNMT3A-202ENST00000321117 C7orf31Q8N865 590 aa13.33□□□□□ -0.27
DNMT3A-202ENST00000321117 GSDMBQ8TAX9 411 aa13.33□□□□□ -0.27
DNMT3A-202ENST00000321117 NUF2Q9BZD4 464 aa13.33□□□□□ -0.27
DNMT3A-202ENST00000321117 RSAD1Q9HA92 442 aa13.33□□□□□ -0.27
DNMT3A-202ENST00000321117 PAK5Q9P286 719 aa13.33□□□□□ -0.27
DNMT3A-202ENST00000321117 THEGQ9P2T0 379 aa13.33□□□□□ -0.27
DNMT3A-202ENST00000321117 MTA2O94776 668 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 MX2P20592 715 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 ATP4AP20648 1035 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 ATP6V1C1P21283 382 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 HOXA10P31260 410 aaPredicted RBP13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 SDC4P31431 198 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 CACNA2D1P54289 1103 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 CCDC15Q0P6D6 951 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 SPP2Q13103 211 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 ATP13A4Q4VNC1 1196 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 SEZ6Q53EL9 994 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 SCUBE1Q8IWY4 988 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 RDM1Q8NG50 284 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 ZNF606Q8WXB4 792 aa13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 SCG3Q8WXD2 468 aaKnown RBP13.33□□□□□ -0.28
DNMT3A-202ENST00000321117 SPOCK2Q92563 424 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms