RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 MFSD14CQ5VZR4 134 aa11.55□□□□□ -0.56
TOP3A-201ENST00000321105 BRSK2Q8IWQ3 736 aa11.55□□□□□ -0.56
TOP3A-201ENST00000321105 HIPK4Q8NE63 616 aa11.55□□□□□ -0.56
TOP3A-201ENST00000321105 RAET1EQ8TD07 263 aa11.55□□□□□ -0.56
TOP3A-201ENST00000321105 EDEM1Q92611 657 aa11.55□□□□□ -0.56
TOP3A-201ENST00000321105 CDC42EP4Q9H3Q1 356 aaKnown RBP11.55□□□□□ -0.56
TOP3A-201ENST00000321105 EIF3HO15372 352 aaKnown RBP eCLIP11.54□□□□□ -0.567e-7■□□□□ 9.9
TOP3A-201ENST00000321105 GRIK1P39086 918 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 ATN1P54259 1190 aaPredicted RBP11.54□□□□□ -0.56
TOP3A-201ENST00000321105 TMPRSS15P98073 1019 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 ACVR2BQ13705 512 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 NAA25Q14CX7 972 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 BMT2Q1RMZ1 405 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 FBXW10Q5XX13 1052 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 TRIM68Q6AZZ1 485 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 CDT1Q9H211 546 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.54□□□□□ -0.56
TOP3A-201ENST00000321105 CTNNAL1Q9UBT7 734 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 COL18A1P39060 1754 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 URB1O60287 2271 aaKnown RBP11.54□□□□□ -0.56
TOP3A-201ENST00000321105 EDIL3O43854 480 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 GCNT1Q02742 428 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 RNF135Q8IUD6 432 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 TTC13Q8NBP0 860 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 FAM172AQ8WUF8 416 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 STMN2Q93045 179 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 PGBD4Q96DM1 585 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 TNIP3Q96KP6 325 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 TEPSINQ96N21 525 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 PABPC3Q9H361 631 aaKnown RBP11.54□□□□□ -0.56
TOP3A-201ENST00000321105 UBP1Q9NZI7 540 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 IRS2Q9Y4H2 1338 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 E5RJQ4 531 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 ARIH2O95376 493 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 SHBGP04278 402 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 CPB1P15086 417 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 OR1G1P47890 313 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 CTCFP49711 727 aaPredicted RBP11.54□□□□□ -0.56
TOP3A-201ENST00000321105 TMEM63BQ5T3F8 832 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 TLK2Q86UE8 772 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 WDR49Q8IV35 697 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.54□□□□□ -0.56
TOP3A-201ENST00000321105 CHMP6Q96FZ7 201 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 TMEM176AQ96HP8 235 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 CNOT10Q9H9A5 744 aaKnown RBP11.54□□□□□ -0.56
TOP3A-201ENST00000321105 STAP1Q9ULZ2 295 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 ATRNL1Q5VV63 1379 aa11.54□□□□□ -0.56
TOP3A-201ENST00000321105 APOL1O14791 398 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 GRIN3BO60391 1043 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 ITIH2P19823 946 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 PTENP60484 403 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 ACTN3Q08043 901 aaPredicted RBP11.53□□□□□ -0.56
TOP3A-201ENST00000321105 NFIL3Q16649 462 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 LRRC31Q6UY01 552 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 CCDC117Q8IWD4 279 aaPredicted RBP11.53□□□□□ -0.56
TOP3A-201ENST00000321105 TMEM192Q8IY95 271 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 PRELID2Q8N945 189 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 MORC4Q8TE76 937 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 VPS33BQ9H267 617 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 TRABDQ9H4I3 376 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 SSX2IPQ9Y2D8 614 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 MYO5AQ9Y4I1 1855 aaKnown RBP11.53□□□□□ -0.56
TOP3A-201ENST00000321105 M0QYT0 321 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 COPEO14579 308 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 BANF1O75531 89 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 RECQL4O94761 1208 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 BAG2O95816 211 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 CFHP08603 1231 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 GPD1P21695 349 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 SNRPFP62306 86 aaKnown RBP11.53□□□□□ -0.56
TOP3A-201ENST00000321105 DNAJC3Q13217 504 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 MYBPC2Q14324 1141 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 MDH1BQ5I0G3 518 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 PLEKHO2Q8TD55 490 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 ABI2Q9NYB9 513 aaPredicted RBP11.53□□□□□ -0.56
TOP3A-201ENST00000321105 CACNG4Q9UBN1 327 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 CRCPO75575 148 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 IL18RAPO95256 599 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 CCDC130P13994 396 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 MAP3K7CLP57077 242 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 TAS2R40P59535 323 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 EFHC2Q5JST6 749 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 C11orf63Q6NUN7 778 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 TMEM130Q8N3G9 435 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 PPP4R1Q8TF05 950 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 ZNF473Q8WTR7 871 aaKnown RBP11.53□□□□□ -0.56
TOP3A-201ENST00000321105 ZNF560Q96MR9 790 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 GAD1Q99259 594 aa11.53□□□□□ -0.56
TOP3A-201ENST00000321105 CEP290O15078 2479 aa11.52□□□□□ -0.56
TOP3A-201ENST00000321105 A0A087WUV0 522 aaPredicted RBP11.52□□□□□ -0.56
TOP3A-201ENST00000321105 SCAMP3O14828 347 aaKnown RBP11.52□□□□□ -0.56
TOP3A-201ENST00000321105 ARF4P18085 180 aaPredicted RBP11.52□□□□□ -0.56
TOP3A-201ENST00000321105 OVGP1Q12889 678 aa11.52□□□□□ -0.56
TOP3A-201ENST00000321105 ARL13BQ3SXY8 428 aa11.52□□□□□ -0.56
TOP3A-201ENST00000321105 PPP1R2P3Q6NXS1 205 aa11.52□□□□□ -0.56
TOP3A-201ENST00000321105 MYLK4Q86YV6 388 aaPredicted RBP11.52□□□□□ -0.56
TOP3A-201ENST00000321105 SAMD3Q8N6K7 520 aa11.52□□□□□ -0.56
TOP3A-201ENST00000321105 CCHCR1Q8TD31 782 aa11.52□□□□□ -0.56
TOP3A-201ENST00000321105 ABHD16BQ9H3Z7 469 aa11.52□□□□□ -0.56
TOP3A-201ENST00000321105 SIX2Q9NPC8 291 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms