RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 LGALS13Q9UHV8 139 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 CYTH4Q9UIA0 394 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 A0A1W2PPM1 405 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 FAM189A1O60320 539 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 TCEA3O75764 348 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 CXCL8P10145 99 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 TAC1P20366 129 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 GCAP28676 217 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 EFNA5P52803 228 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 IL9RQ01113 521 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 PIGHQ14442 188 aaPredicted RBP18.34■□□□□ 0.53
COL9A1-201ENST00000320755 NEDD9Q14511 834 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 TAF5Q15542 800 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 APOBEC3FQ8IUX4 373 aaKnown RBP18.34■□□□□ 0.53
COL9A1-201ENST00000320755 HSPH1Q92598 858 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 KLHL14Q9P2G3 628 aa18.34■□□□□ 0.53
COL9A1-201ENST00000320755 CA4P22748 312 aa18.33■□□□□ 0.53
COL9A1-201ENST00000320755 SSTR1P30872 391 aa18.33■□□□□ 0.53
COL9A1-201ENST00000320755 BAG6P46379 1132 aa18.33■□□□□ 0.53
COL9A1-201ENST00000320755 CLCN3P51790 818 aa18.33■□□□□ 0.53
COL9A1-201ENST00000320755 ANKRD22Q5VYY1 191 aa18.33■□□□□ 0.53
COL9A1-201ENST00000320755 CGB2Q6NT52 195 aa18.33■□□□□ 0.53
COL9A1-201ENST00000320755 KIAA0319LQ8IZA0 1049 aa18.33■□□□□ 0.53
COL9A1-201ENST00000320755 COPS5Q92905 334 aa18.33■□□□□ 0.53
COL9A1-201ENST00000320755 KLHL29Q96CT2 875 aa18.33■□□□□ 0.53
COL9A1-201ENST00000320755 MAGEB18Q96M61 343 aa18.33■□□□□ 0.53
COL9A1-201ENST00000320755 WDR91A4D1P6 747 aa18.33■□□□□ 0.52
COL9A1-201ENST00000320755 IGF2BP3O00425 579 aaKnown RBP eCLIP18.33■□□□□ 0.52
COL9A1-201ENST00000320755 ITGBL1O95965 494 aaPredicted RBP18.33■□□□□ 0.52
COL9A1-201ENST00000320755 OAS1P00973 400 aaKnown RBP18.33■□□□□ 0.52
COL9A1-201ENST00000320755 TNNC2P02585 160 aa18.33■□□□□ 0.52
COL9A1-201ENST00000320755 RPA3P35244 121 aaPredicted RBP18.33■□□□□ 0.52
COL9A1-201ENST00000320755 NCALDP61601 193 aa18.33■□□□□ 0.52
COL9A1-201ENST00000320755 VGLL4Q14135 290 aa18.33■□□□□ 0.52
COL9A1-201ENST00000320755 EFTUD2Q15029 972 aaKnown RBP eCLIP18.33■□□□□ 0.52
COL9A1-201ENST00000320755 PPP1R21Q6ZMI0 780 aa18.33■□□□□ 0.52
COL9A1-201ENST00000320755 TRABD2AQ86V40 505 aa18.33■□□□□ 0.52
COL9A1-201ENST00000320755 UBR7Q8N806 425 aa18.33■□□□□ 0.52
COL9A1-201ENST00000320755 CPSF3Q9UKF6 684 aaKnown RBP18.33■□□□□ 0.52
COL9A1-201ENST00000320755 TCRBV5S1A1TA0A578 114 aa18.32■□□□□ 0.52
COL9A1-201ENST00000320755 HOXC6P09630 235 aa18.32■□□□□ 0.52
COL9A1-201ENST00000320755 KLF6Q99612 283 aaPredicted RBP18.32■□□□□ 0.52
COL9A1-201ENST00000320755 CALN1Q9BXU9 219 aa18.32■□□□□ 0.52
COL9A1-201ENST00000320755 NOD2Q9HC29 1040 aa18.32■□□□□ 0.52
COL9A1-201ENST00000320755 PARP14Q460N5 1801 aa18.32■□□□□ 0.52
COL9A1-201ENST00000320755 GOLGA8RI6L899 631 aa18.32■□□□□ 0.52
COL9A1-201ENST00000320755 ATP6V1G2O95670 118 aa18.32■□□□□ 0.52
COL9A1-201ENST00000320755 LSM8O95777 96 aaKnown RBP18.32■□□□□ 0.52
COL9A1-201ENST00000320755 ASPAP45381 313 aa18.32■□□□□ 0.52
COL9A1-201ENST00000320755 CTCFP49711 727 aaPredicted RBP18.32■□□□□ 0.52
COL9A1-201ENST00000320755 OASLQ15646 514 aaKnown RBP18.32■□□□□ 0.52
COL9A1-201ENST00000320755 ATF7IP2Q5U623 682 aa18.32■□□□□ 0.52
COL9A1-201ENST00000320755 IER5Q5VY09 327 aa18.32■□□□□ 0.52
COL9A1-201ENST00000320755 LBX2Q6XYB7 198 aa18.32■□□□□ 0.52
COL9A1-201ENST00000320755 CENPUQ71F23 418 aa18.32■□□□□ 0.52
COL9A1-201ENST00000320755 ARFGAP1Q8N6T3 406 aa18.32■□□□□ 0.52
COL9A1-201ENST00000320755 RSAD2Q8WXG1 361 aa18.32■□□□□ 0.52
COL9A1-201ENST00000320755 SMC6Q96SB8 1091 aa18.32■□□□□ 0.52
COL9A1-201ENST00000320755 METTL5Q9NRN9 209 aaKnown RBP18.32■□□□□ 0.52
COL9A1-201ENST00000320755 MGRN1O60291 552 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 GSTA1P08263 222 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 MCL1Q07820 350 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 RNASEH2BQ5TBB1 312 aaKnown RBP18.31■□□□□ 0.52
COL9A1-201ENST00000320755 METTL7BQ6UX53 244 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 CCHCR1Q8TD31 782 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 ANKRD36BP1Q96IX9 119 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 CPXM1Q96SM3 734 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 SPATC1LQ9H0A9 340 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 XYLT2Q9H1B5 865 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 C12orf65Q9H3J6 166 aaKnown RBP18.31■□□□□ 0.52
COL9A1-201ENST00000320755 HMGXB4Q9UGU5 601 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 DOCK1Q14185 1865 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 FZD9O00144 591 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 LRCH4O75427 683 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 EIF4BP23588 611 aaKnown RBP18.31■□□□□ 0.52
COL9A1-201ENST00000320755 MGAT5Q09328 741 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 TFDP1Q14186 410 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 HIF1AQ16665 826 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 MSS51Q4VC12 460 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 KCTD6Q8NC69 237 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 PRCCQ92733 491 aaPredicted RBP18.31■□□□□ 0.52
COL9A1-201ENST00000320755 MINDY3Q9H8M7 445 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 USP2O75604 605 aaPredicted RBP18.31■□□□□ 0.52
COL9A1-201ENST00000320755 AP3M2P53677 418 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 COPS2P61201 443 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 MORF4L2Q15014 288 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 BBS9Q3SYG4 887 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 PPP1R2P3Q6NXS1 205 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 CCDC91Q7Z6B0 441 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 RFX6Q8HWS3 928 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 FAM71DQ8N9W8 422 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 PYROXD1Q8WU10 500 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 L3MBTL1Q9Y468 752 aa18.31■□□□□ 0.52
COL9A1-201ENST00000320755 A8MUI8 341 aa18.3■□□□□ 0.52
COL9A1-201ENST00000320755 IRX3P78415 501 aaPredicted RBP18.3■□□□□ 0.52
COL9A1-201ENST00000320755 ZNF667Q5HYK9 610 aa18.3■□□□□ 0.52
COL9A1-201ENST00000320755 PPP1R15BQ5SWA1 713 aa18.3■□□□□ 0.52
COL9A1-201ENST00000320755 FNBP1LQ5T0N5 605 aa18.3■□□□□ 0.52
COL9A1-201ENST00000320755 LRRC38Q5VT99 294 aa18.3■□□□□ 0.52
COL9A1-201ENST00000320755 UBA3Q8TBC4 463 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms