RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 BACE2Q9Y5Z0 518 aa14.46□□□□□ -0.09
PRPF18-201ENST00000320054 ATG2AQ2TAZ0 1938 aa14.46□□□□□ -0.09
PRPF18-201ENST00000320054 MTCL1Q9Y4B5 1905 aaKnown RBP14.46□□□□□ -0.09
PRPF18-201ENST00000320054 SOWAHDA6NJG2 315 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 EIF3CLB5ME19 914 aaKnown RBP14.45□□□□□ -0.1
PRPF18-201ENST00000320054 O00370 1275 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 DDX3XO00571 662 aaKnown RBP eCLIP14.45□□□□□ -0.11e-6■■□□□ 13.6
PRPF18-201ENST00000320054 HCRTO43612 131 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 AKR1B10O60218 316 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 CAPN15O75808 1086 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 CALCAP01258 141 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 MMEP08473 750 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 ACAT1P24752 427 aaKnown RBP14.45□□□□□ -0.1
PRPF18-201ENST00000320054 KIF11P52732 1056 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 TSPY1Q01534 308 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 UBE3AQ05086 875 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 MAPRE1Q15691 268 aaKnown RBP14.45□□□□□ -0.1
PRPF18-201ENST00000320054 SLC18A3Q16572 532 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 CTXN3Q4LDR2 81 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 KIAA0319Q5VV43 1072 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 RAD9BQ6WBX8 426 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 GLYCTKQ8IVS8 523 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 OR10T2Q8NGX3 314 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 LNX1Q8TBB1 728 aaPredicted RBP14.45□□□□□ -0.1
PRPF18-201ENST00000320054 MYCBPAPQ8TBZ2 947 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 TRIM44Q96DX7 344 aaPredicted RBP14.45□□□□□ -0.1
PRPF18-201ENST00000320054 CYFIP2Q96F07 1278 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 TGS1Q96RS0 853 aaKnown RBP14.45□□□□□ -0.1
PRPF18-201ENST00000320054 EIF3CQ99613 913 aaKnown RBP14.45□□□□□ -0.1
PRPF18-201ENST00000320054 HNRNPABQ99729 332 aaKnown RBP14.45□□□□□ -0.1
PRPF18-201ENST00000320054 ZSWIM1Q9BR11 485 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 C17orf80Q9BSJ5 609 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 ZCWPW1Q9H0M4 648 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 CRTAC1Q9NQ79 661 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 MTRRQ9UBK8 725 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 NENFQ9UMX5 172 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.45□□□□□ -0.1
PRPF18-201ENST00000320054 SSX2IPQ9Y2D8 614 aa14.45□□□□□ -0.1
PRPF18-201ENST00000320054 YBX2Q9Y2T7 364 aaKnown RBP14.45□□□□□ -0.1
PRPF18-201ENST00000320054 EPN1Q9Y6I3 576 aaPredicted RBP14.45□□□□□ -0.1
PRPF18-201ENST00000320054 A0A087X0T9 212 aa14.44□□□□□ -0.1
PRPF18-201ENST00000320054 ATP2C2O75185 946 aa14.44□□□□□ -0.1
PRPF18-201ENST00000320054 ARHGEF15O94989 841 aa14.44□□□□□ -0.1
PRPF18-201ENST00000320054 NDUFA10O95299 355 aa14.44□□□□□ -0.1
PRPF18-201ENST00000320054 LSM8O95777 96 aaKnown RBP14.44□□□□□ -0.1
PRPF18-201ENST00000320054 URODP06132 367 aa14.44□□□□□ -0.1
PRPF18-201ENST00000320054 FAM228BP0C875 321 aa14.44□□□□□ -0.1
PRPF18-201ENST00000320054 GZMAP12544 262 aa14.44□□□□□ -0.1
PRPF18-201ENST00000320054 CDH5P33151 784 aaPredicted RBP14.44□□□□□ -0.1
PRPF18-201ENST00000320054 PSMC1P62191 440 aaKnown RBP14.44□□□□□ -0.1
PRPF18-201ENST00000320054 CREMQ03060 361 aa14.44□□□□□ -0.1
PRPF18-201ENST00000320054 TAP1Q03518 808 aa14.44□□□□□ -0.1
PRPF18-201ENST00000320054 PSMD5Q16401 504 aa14.44□□□□□ -0.1
PRPF18-201ENST00000320054 PPP1R26Q5T8A7 1209 aaPredicted RBP14.44□□□□□ -0.1
PRPF18-201ENST00000320054 TAF3Q5VWG9 929 aa14.44□□□□□ -0.1
PRPF18-201ENST00000320054 KIAA1841Q6NSI8 718 aa14.44□□□□□ -0.1
PRPF18-201ENST00000320054 PPP1R2P3Q6NXS1 205 aa14.44□□□□□ -0.1
PRPF18-201ENST00000320054 DCP1BQ8IZD4 617 aaKnown RBP14.44□□□□□ -0.1
PRPF18-201ENST00000320054 VPS52Q8N1B4 723 aa14.44□□□□□ -0.1
PRPF18-201ENST00000320054 C12orf29Q8N999 325 aa14.44□□□□□ -0.1
PRPF18-201ENST00000320054 RIN2Q8WYP3 895 aaPredicted RBP14.44□□□□□ -0.1
PRPF18-201ENST00000320054 B3GALT6Q96L58 329 aa14.44□□□□□ -0.1
PRPF18-201ENST00000320054 ZNF830Q96NB3 372 aaPredicted RBP14.44□□□□□ -0.1
PRPF18-201ENST00000320054 C11orf84Q9BUA3 381 aaPredicted RBP14.44□□□□□ -0.1
PRPF18-201ENST00000320054 PBX4Q9BYU1 374 aa14.44□□□□□ -0.1
PRPF18-201ENST00000320054 ZNF518BQ9C0D4 1074 aa14.44□□□□□ -0.1
PRPF18-201ENST00000320054 ZBP1Q9H171 429 aa14.44□□□□□ -0.1
PRPF18-201ENST00000320054 LHX5Q9H2C1 402 aa14.44□□□□□ -0.1
PRPF18-201ENST00000320054 ADAMTS1Q9UHI8 967 aa14.44□□□□□ -0.1
PRPF18-201ENST00000320054 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.44□□□□□ -0.1
PRPF18-201ENST00000320054 CHD9Q3L8U1 2897 aa14.44□□□□□ -0.1
PRPF18-201ENST00000320054 GREB1Q4ZG55 1949 aa14.43□□□□□ -0.1
PRPF18-201ENST00000320054 A0A1W2PPC1 479 aa14.43□□□□□ -0.1
PRPF18-201ENST00000320054 MYBPHLA2RUH7 354 aa14.43□□□□□ -0.1
PRPF18-201ENST00000320054 CYP1A1P04798 512 aaPredicted RBP14.43□□□□□ -0.1
PRPF18-201ENST00000320054 CTSAP10619 480 aa14.43□□□□□ -0.1
PRPF18-201ENST00000320054 PBX2P40425 430 aa14.43□□□□□ -0.1
PRPF18-201ENST00000320054 SMAD3P84022 425 aaKnown RBP14.43□□□□□ -0.1
PRPF18-201ENST00000320054 SMARCB1Q12824 385 aa14.43□□□□□ -0.1
PRPF18-201ENST00000320054 MTF1Q14872 753 aa14.43□□□□□ -0.1
PRPF18-201ENST00000320054 NFE2Q16621 373 aaPredicted RBP14.43□□□□□ -0.1
PRPF18-201ENST00000320054 CLEC16AQ2KHT3 1053 aa14.43□□□□□ -0.1
PRPF18-201ENST00000320054 MDH1BQ5I0G3 518 aa14.43□□□□□ -0.1
PRPF18-201ENST00000320054 C10orf76Q5T2E6 689 aa14.43□□□□□ -0.1
PRPF18-201ENST00000320054 SLC8B1Q6J4K2 584 aa14.43□□□□□ -0.1
PRPF18-201ENST00000320054 FUKQ8N0W3 1084 aa14.43□□□□□ -0.1
PRPF18-201ENST00000320054 ANKRD52Q8NB46 1076 aa14.43□□□□□ -0.1
PRPF18-201ENST00000320054 SPPL3Q8TCT6 385 aa14.43□□□□□ -0.1
PRPF18-201ENST00000320054 PCDHB18PQ96TA0 734 aa14.43□□□□□ -0.1
PRPF18-201ENST00000320054 LPIN3Q9BQK8 851 aa14.43□□□□□ -0.1
PRPF18-201ENST00000320054 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.43□□□□□ -0.1
PRPF18-201ENST00000320054 B3GNT5Q9BYG0 378 aa14.43□□□□□ -0.1
PRPF18-201ENST00000320054 PDCL3Q9H2J4 239 aa14.43□□□□□ -0.1
PRPF18-201ENST00000320054 RXFP1Q9HBX9 757 aa14.43□□□□□ -0.1
PRPF18-201ENST00000320054 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.43□□□□□ -0.1
PRPF18-201ENST00000320054 MRPL17Q9NRX2 175 aaKnown RBP14.43□□□□□ -0.1
PRPF18-201ENST00000320054 FAM49BQ9NUQ9 324 aa14.43□□□□□ -0.1
PRPF18-201ENST00000320054 FNIP2Q9P278 1114 aa14.43□□□□□ -0.1
PRPF18-201ENST00000320054 HESX1Q9UBX0 185 aa14.43□□□□□ -0.1
PRPF18-201ENST00000320054 NAGPAQ9UK23 515 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms