RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 GSTA5Q7RTV2 222 aa16.39■□□□□ 0.21
SHROOM1-201ENST00000319854 ZNF606Q8WXB4 792 aa16.39■□□□□ 0.21
SHROOM1-201ENST00000319854 KIAA1586Q9HCI6 787 aa16.39■□□□□ 0.21
SHROOM1-201ENST00000319854 RNF19AQ9NV58 838 aa16.39■□□□□ 0.21
SHROOM1-201ENST00000319854 MTRF1LQ9UGC7 380 aaKnown RBP16.39■□□□□ 0.21
SHROOM1-201ENST00000319854 ATP8B3O60423 1300 aa16.39■□□□□ 0.21
SHROOM1-201ENST00000319854 TP73O15350 636 aa16.39■□□□□ 0.21
SHROOM1-201ENST00000319854 STAM2O75886 525 aa16.39■□□□□ 0.21
SHROOM1-201ENST00000319854 TMEM174Q8WUU8 243 aa16.39■□□□□ 0.21
SHROOM1-201ENST00000319854 UCMAQ8WVF2 138 aa16.39■□□□□ 0.21
SHROOM1-201ENST00000319854 ADAM33Q9BZ11 813 aa16.39■□□□□ 0.21
SHROOM1-201ENST00000319854 PASKQ96RG2 1323 aa16.39■□□□□ 0.21
SHROOM1-201ENST00000319854 LRRD1A4D1F6 860 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 WFS1O76024 890 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 CHKAP35790 457 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 MAMLD1Q13495 774 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 MAPK6Q16659 721 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 ZNF568Q3ZCX4 644 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 EAPPQ56P03 285 aaPredicted RBP16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 LIN9Q5TKA1 542 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 EEF1DP3Q658K8 133 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 TMEM154Q6P9G4 183 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 DCUN1D2Q6PH85 259 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 LONP2Q86WA8 852 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 RIOX2Q8IUF8 465 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 ABRAQ8N0Z2 381 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 STK32AQ8WU08 396 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 MRRFQ96E11 262 aaKnown RBP16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 MCEEQ96PE7 176 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 PLCD4Q9BRC7 762 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 KLHL14Q9P2G3 628 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 CNTNAP2Q9UHC6 1331 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 TBK1Q9UHD2 729 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 POLIQ9UNA4 740 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 RGPD3A6NKT7 1758 aaPredicted RBP16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 RGPD4Q7Z3J3 1758 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 RTN3O95197 1032 aaPredicted RBP16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 CETPP11597 493 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 ATP6V1C1P21283 382 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 RFC5P40937 340 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 NOMO3P69849 1222 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 KCTD2Q14681 263 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 METTL7BQ6UX53 244 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 ENOSF1Q7L5Y1 443 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 ART4Q93070 314 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 CGRRF1Q99675 332 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 LBHD1Q9BQE6 289 aaPredicted RBP16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 STMN4Q9H169 189 aaPredicted RBP16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 TJP2Q9UDY2 1190 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 ASB3Q9Y575 518 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 ENTPD5O75356 428 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 ATG7O95352 703 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 TMEM191BP0C7N4 346 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 TXNP10599 105 aaKnown RBP16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 BRAFP15056 766 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 GBP1P32455 592 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 PTDSS1P48651 473 aaKnown RBP16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 DYNLT1P63172 113 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 MON1BQ7L1V2 547 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 NUDCD1Q96RS6 583 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 C10orf88Q9H8K7 445 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 MINDY3Q9H8M7 445 aa16.38■□□□□ 0.21
SHROOM1-201ENST00000319854 F8VP50 259 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 MTA2O94776 668 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 POTEJP0CG39 1038 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 CXCL8P10145 99 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 BPIFB4P59827 614 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 PPP2R5EQ16537 467 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 SMTNL2Q2TAL5 461 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 RNF43Q68DV7 783 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 TXNRD3NBQ6F5E7 133 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 SPOCK2Q92563 424 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 ERP27Q96DN0 273 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 PLVAPQ9BX97 442 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 MRPL4Q9BYD3 311 aaKnown RBP16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 IRAK4Q9NWZ3 460 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 PCYOX1Q9UHG3 505 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 CHKBQ9Y259 395 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 ZNFX1Q9P2E3 1918 aaKnown RBP16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 PODXLO00592 558 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 MSCO60682 206 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 TAC1P20366 129 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 EPHB2P29323 1055 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 PLCB3Q01970 1234 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 ROR2Q01974 943 aaKnown RBP16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 GPAT2Q6NUI2 795 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 MFN1Q8IWA4 741 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 CISHQ9NSE2 258 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 DLGAP2Q9P1A6 1054 aa16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 SAE1Q9UBE0 346 aaPredicted RBP16.37■□□□□ 0.21
SHROOM1-201ENST00000319854 LDHAP00338 332 aaKnown RBP16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 T-ENOLP0DO92 83 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 ICAM3P32942 547 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 CENPCQ03188 943 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 SLC5A9Q2M3M2 681 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 EFCAB12Q6NXP0 572 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 NIFKQ9BYG3 293 aaKnown RBP16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 RNPEPQ9H4A4 650 aa16.36■□□□□ 0.21
SHROOM1-201ENST00000319854 MCM3APO60318 1980 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms