RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 OTUD5Q96G74 571 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 FAM124BQ9H5Z6 455 aaPredicted RBP8.31□□□□□ -1.08
CNOT4-201ENST00000315544 TOMM22Q9NS69 142 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 NEUROG3Q9Y4Z2 214 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 CHD9Q3L8U1 2897 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 ADCY6O43306 1168 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 ATP1A2P50993 1020 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 RPS6P62753 249 aaKnown RBP8.31□□□□□ -1.08
CNOT4-201ENST00000315544 DHX9Q08211 1270 aaKnown RBP8.31□□□□□ -1.08
CNOT4-201ENST00000315544 NIPAL4Q0D2K0 466 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 PICALMQ13492 652 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 TSHZ1Q6ZSZ6 1077 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 CLEC14AQ86T13 490 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 PARK7Q99497 189 aaKnown RBP8.31□□□□□ -1.08
CNOT4-201ENST00000315544 TSG101Q99816 390 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 AS3MTQ9HBK9 375 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 SLC52A3Q9NQ40 469 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 FLRT1Q9NZU1 646 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 RPL26L1Q9UNX3 145 aaKnown RBP8.31□□□□□ -1.08
CNOT4-201ENST00000315544 NAALADL1Q9UQQ1 740 aa8.31□□□□□ -1.08
CNOT4-201ENST00000315544 ZNF865P0CJ78 1059 aaPredicted RBP8.3□□□□□ -1.08
CNOT4-201ENST00000315544 TPBGLP0DKB5 382 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 SLC1A1P43005 524 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 QARSP47897 775 aaKnown RBP8.3□□□□□ -1.08
CNOT4-201ENST00000315544 ALDH5A1P51649 535 aaPredicted RBP8.3□□□□□ -1.08
CNOT4-201ENST00000315544 POU5F1BQ06416 359 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 CLUL1Q15846 466 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 XXYLT1Q8NBI6 393 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 ZBTB9Q96C00 473 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 CCDC106Q9BWC9 280 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 ELP3Q9H9T3 547 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 MOCS1Q9NZB8 636 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 NOVA2Q9UNW9 492 aaKnown RBP8.3□□□□□ -1.08
CNOT4-201ENST00000315544 SOWAHBA6NEL2 793 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 DNALI1O14645 258 aaPredicted RBP8.3□□□□□ -1.08
CNOT4-201ENST00000315544 ARIH2O95376 493 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 TGDSO95455 350 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 PSMA3P25788 255 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 OCRLQ01968 901 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 CEP85LQ5SZL2 805 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 CYHR1Q6ZMK1 362 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 AGAP11Q8TF27 550 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 ARNTL2Q8WYA1 636 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 PRMT1Q99873 361 aaKnown RBP8.3□□□□□ -1.08
CNOT4-201ENST00000315544 MAFGO15525 162 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 LRCH4O75427 683 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 ERLIN2O94905 339 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 GJA8P48165 433 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 TNNC1P63316 161 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 GPR153Q6NV75 609 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 TIFABQ6ZNK6 161 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 HMGCLL1Q8TB92 370 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 ZNF564Q8TBZ8 553 aaPredicted RBP8.3□□□□□ -1.08
CNOT4-201ENST00000315544 ZNF398Q8TD17 642 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 PIWIL1Q96J94 861 aaKnown RBP8.3□□□□□ -1.08
CNOT4-201ENST00000315544 KIFC3Q9BVG8 833 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 NUP85Q9BW27 656 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 RBM38Q9H0Z9 239 aaKnown RBP8.3□□□□□ -1.08
CNOT4-201ENST00000315544 KRT82Q9NSB4 513 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 ZDHHC7Q9NXF8 308 aa8.3□□□□□ -1.08
CNOT4-201ENST00000315544 MYO15AQ9UKN7 3530 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 SPENQ96T58 3664 aaKnown RBP8.29□□□□□ -1.08
CNOT4-201ENST00000315544 EXTL3O43909 919 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 B4GALT4O60513 344 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 UBOX5O94941 541 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 RAP1GDS1P52306 607 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 CAPSQ13938 189 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 SGSM1Q2NKQ1 1148 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 DAAM2Q86T65 1068 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 XYLT1Q86Y38 959 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 CRIPAKQ8N1N5 446 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 ANKRD20A12PQ8NF67 263 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 FBXO27Q8NI29 283 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 TADA1Q96BN2 335 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 DRC1Q96MC2 740 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 TWNKQ96RR1 684 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 PKMYT1Q99640 499 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 AZI2Q9H6S1 392 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 GNEQ9Y223 722 aaKnown RBP8.29□□□□□ -1.08
CNOT4-201ENST00000315544 A0A1W2PPC1 479 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 TRIM64CA6NLI5 447 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 MAFO75444 373 aaPredicted RBP8.29□□□□□ -1.08
CNOT4-201ENST00000315544 GCNT3O95395 438 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 MYBL1P10243 752 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 OSBPP22059 807 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 FGFR4P22455 802 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 GBP1P32455 592 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 PSMD8P48556 350 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 LIG3P49916 1009 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 CDK7P50613 346 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 COPS2P61201 443 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 ATP13A4Q4VNC1 1196 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 KCTD11Q693B1 232 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 KRT39Q6A163 491 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 ENOSF1Q7L5Y1 443 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 TRPM8Q7Z2W7 1104 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 PARP9Q8IXQ6 854 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 PLD5Q8N7P1 536 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 MIEF2Q96C03 454 aa8.29□□□□□ -1.08
CNOT4-201ENST00000315544 ZNF577Q9BSK1 485 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms