RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 MSANTD3Q96H12 275 aa8.78□□□□□ -1
TPM3-203ENST00000312970 SEPT5Q99719 369 aaPredicted RBP8.78□□□□□ -1
TPM3-203ENST00000312970 FAM213AQ9BRX8 229 aa8.78□□□□□ -1
TPM3-203ENST00000312970 CHRDQ9H2X0 955 aa8.78□□□□□ -1
TPM3-203ENST00000312970 ZSCAN16Q9H4T2 348 aaPredicted RBP8.78□□□□□ -1
TPM3-203ENST00000312970 C8orf33Q9H7E9 229 aaPredicted RBP8.78□□□□□ -1
TPM3-203ENST00000312970 OLFML3Q9NRN5 406 aa8.78□□□□□ -1
TPM3-203ENST00000312970 PANK4Q9NVE7 773 aa8.78□□□□□ -1
TPM3-203ENST00000312970 OBP2AQ9NY56 170 aa8.78□□□□□ -1
TPM3-203ENST00000312970 RALYQ9UKM9 306 aaKnown RBP8.78□□□□□ -1
TPM3-203ENST00000312970 MORC2Q9Y6X9 1032 aaPredicted RBP8.78□□□□□ -1
TPM3-203ENST00000312970 CNOT1A5YKK6 2376 aaKnown RBP8.78□□□□□ -1
TPM3-203ENST00000312970 SCN1AP35498 2009 aa8.78□□□□□ -1
TPM3-203ENST00000312970 ZFYVE26Q68DK2 2539 aa8.78□□□□□ -1
TPM3-203ENST00000312970 HUS1O60921 280 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 LILRB5O75023 590 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 CHRNB1P11230 501 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 GARTP22102 1010 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 CDC25CP30307 473 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 CCR3P51677 355 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 CDR1P51861 262 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 ATXN1P54253 815 aaKnown RBP8.77□□□□□ -1.01
TPM3-203ENST00000312970 TFAMQ00059 246 aaKnown RBP8.77□□□□□ -1.01
TPM3-203ENST00000312970 METTL3Q86U44 580 aaKnown RBP8.77□□□□□ -1.01
TPM3-203ENST00000312970 CCDC65Q8IXS2 484 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 EFCAB13Q8IY85 973 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 CSGALNACT2Q8N6G5 542 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 GPR161Q8N6U8 529 aaKnown RBP8.77□□□□□ -1.01
TPM3-203ENST00000312970 GIPC2Q8TF65 315 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 SECISBP2LQ93073 1101 aaKnown RBP8.77□□□□□ -1.01
TPM3-203ENST00000312970 ZNF560Q96MR9 790 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 LRRC3BQ96PB8 259 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 GCNAQ96QF7 691 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 USP28Q96RU2 1077 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 LPIN3Q9BQK8 851 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 MKNK1Q9BUB5 465 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 LRRC27Q9C0I9 530 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 TASP1Q9H6P5 420 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 TMEM206Q9H813 350 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 PRMT8Q9NR22 394 aaPredicted RBP8.77□□□□□ -1.01
TPM3-203ENST00000312970 THG1LQ9NWX6 298 aaKnown RBP8.77□□□□□ -1.01
TPM3-203ENST00000312970 NCDNQ9UBB6 729 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 ZMYM5Q9UJ78 669 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 AGAP1Q9UPQ3 857 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 PCDHB5Q9Y5E4 795 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 FAM208BQ5VWN6 2430 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 SPEGQ15772 3267 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 NCANO14594 1321 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 ANK1P16157 1881 aa8.77□□□□□ -1.01
TPM3-203ENST00000312970 WDFY3Q8IZQ1 3526 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 TICRRQ7Z2Z1 1910 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 F5P12259 2224 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 FRMD3A2A2Y4 597 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 MYBPHLA2RUH7 354 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 SOBPA7XYQ1 873 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 STX6O43752 255 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 EXTL3O43909 919 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 ITGB3P05106 788 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 ATF6P18850 670 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 POLR2BP30876 1174 aaKnown RBP8.76□□□□□ -1.01
TPM3-203ENST00000312970 CXCL12P48061 93 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 CASP5P51878 434 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 WNT7BP56706 349 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 RBP5P82980 135 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 TSPY1Q01534 308 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 LRRC32Q14392 662 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 NFE2Q16621 373 aaPredicted RBP8.76□□□□□ -1.01
TPM3-203ENST00000312970 ST3GAL2Q16842 350 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 DGKKQ5KSL6 1271 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 STXBP4Q6ZWJ1 553 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 RALGPS2Q86X27 583 aaPredicted RBP8.76□□□□□ -1.01
TPM3-203ENST00000312970 BRSK2Q8IWQ3 736 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 CMTM8Q8IZV2 173 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 TMEM86AQ8N2M4 240 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 PDCL2Q8N4E4 241 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 SPEM1Q8N4L4 309 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 CELF5Q8N6W0 485 aaKnown RBP8.76□□□□□ -1.01
TPM3-203ENST00000312970 LRRC52Q8N7C0 313 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 PDILTQ8N807 584 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 C1orf127Q8N9H9 656 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 ZSWIM2Q8NEG5 633 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 BPIFB1Q8TDL5 484 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 NOC3LQ8WTT2 800 aaKnown RBP8.76□□□□□ -1.01
TPM3-203ENST00000312970 SAAL1Q96ER3 474 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 ACBD6Q9BR61 282 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 SLC46A2Q9BY10 475 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 EPC1Q9H2F5 836 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 PCIF1Q9H4Z3 704 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 IL21Q9HBE4 155 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 NPDC1Q9NQX5 325 aaPredicted RBP8.76□□□□□ -1.01
TPM3-203ENST00000312970 GDAP2Q9NXN4 497 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 ABI2Q9NYB9 513 aaPredicted RBP8.76□□□□□ -1.01
TPM3-203ENST00000312970 RBAKQ9NYW8 714 aaPredicted RBP8.76□□□□□ -1.01
TPM3-203ENST00000312970 ITGA11Q9UKX5 1188 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 MTMR6Q9Y217 621 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 R3HCC1Q9Y3T6 440 aaKnown RBP8.76□□□□□ -1.01
TPM3-203ENST00000312970 COL4A2P08572 1712 aa8.76□□□□□ -1.01
TPM3-203ENST00000312970 A0A087X0B3 334 aa8.75□□□□□ -1.01
TPM3-203ENST00000312970 DCDC2BA2VCK2 349 aa8.75□□□□□ -1.01
TPM3-203ENST00000312970 GOLGA8IPA6NC78 632 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms