RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 SYNCQ9H7C4 482 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 UBN1Q9NPG3 1134 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 TSPAN16Q9UKR8 245 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 ARL5CA6NH57 179 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 SIGLEC16A6NMB1 481 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 ATP8B1O43520 1251 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 MGEA5O60502 916 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 PYGMP11217 842 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 HSPA6P17066 643 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 GABRB2P47870 512 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 RPL7AP62424 266 aaKnown RBP17.7■□□□□ 0.42
CLCF1-201ENST00000312438 PPP2R5EQ16537 467 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 C12orf29Q8N999 325 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 UBA3Q8TBC4 463 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 HDAC7Q8WUI4 952 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 LPPQ93052 612 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 CPXM1Q96SM3 734 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 ZNF446Q9NWS9 450 aa17.7■□□□□ 0.42
CLCF1-201ENST00000312438 DMGDHQ9UI17 866 aaKnown RBP17.7■□□□□ 0.42
CLCF1-201ENST00000312438 ZRANB2O95218 330 aaKnown RBP eCLIP17.69■□□□□ 0.42
CLCF1-201ENST00000312438 KRT3P12035 628 aa17.69■□□□□ 0.42
CLCF1-201ENST00000312438 PSMC1P62191 440 aaKnown RBP17.69■□□□□ 0.42
CLCF1-201ENST00000312438 PIGHQ14442 188 aaPredicted RBP17.69■□□□□ 0.42
CLCF1-201ENST00000312438 PPP1R26Q5T8A7 1209 aaPredicted RBP17.69■□□□□ 0.42
CLCF1-201ENST00000312438 CYP4A22Q5TCH4 519 aa17.69■□□□□ 0.42
CLCF1-201ENST00000312438 ARHGAP17Q68EM7 881 aa17.69■□□□□ 0.42
CLCF1-201ENST00000312438 CCNI2Q6ZMN8 369 aaPredicted RBP17.69■□□□□ 0.42
CLCF1-201ENST00000312438 RHOT1Q8IXI2 618 aa17.69■□□□□ 0.42
CLCF1-201ENST00000312438 KLHL7Q8IXQ5 586 aa17.69■□□□□ 0.42
CLCF1-201ENST00000312438 KBTBD7Q8WVZ9 684 aa17.69■□□□□ 0.42
CLCF1-201ENST00000312438 MCEEQ96PE7 176 aa17.69■□□□□ 0.42
CLCF1-201ENST00000312438 BEGAINQ9BUH8 593 aa17.69■□□□□ 0.42
CLCF1-201ENST00000312438 MIOSQ9NXC5 875 aa17.69■□□□□ 0.42
CLCF1-201ENST00000312438 STIM2Q9P246 746 aa17.69■□□□□ 0.42
CLCF1-201ENST00000312438 CITO14578 2027 aa17.69■□□□□ 0.42
CLCF1-201ENST00000312438 GOLGA6L10A0A0M3HER8 536 aa17.68■□□□□ 0.42
CLCF1-201ENST00000312438 SART1O43290 800 aaKnown RBP17.68■□□□□ 0.42
CLCF1-201ENST00000312438 GJB6O95452 261 aa17.68■□□□□ 0.42
CLCF1-201ENST00000312438 RPL9P32969 192 aaKnown RBP17.68■□□□□ 0.42
CLCF1-201ENST00000312438 SLC7A5Q01650 507 aa17.68■□□□□ 0.42
CLCF1-201ENST00000312438 PDCLQ13371 301 aa17.68■□□□□ 0.42
CLCF1-201ENST00000312438 SH3TC2Q8TF17 1288 aa17.68■□□□□ 0.42
CLCF1-201ENST00000312438 RSAD1Q9HA92 442 aa17.68■□□□□ 0.42
CLCF1-201ENST00000312438 HESX1Q9UBX0 185 aa17.68■□□□□ 0.42
CLCF1-201ENST00000312438 L1RE1Q9UN81 338 aa17.68■□□□□ 0.42
CLCF1-201ENST00000312438 NME7Q9Y5B8 376 aa17.68■□□□□ 0.42
CLCF1-201ENST00000312438 PSTPIP1O43586 416 aa17.68■□□□□ 0.42
CLCF1-201ENST00000312438 ZMYND10O75800 440 aa17.68■□□□□ 0.42
CLCF1-201ENST00000312438 FGFR1P11362 822 aa17.68■□□□□ 0.42
CLCF1-201ENST00000312438 WARSP23381 471 aaKnown RBP17.68■□□□□ 0.42
CLCF1-201ENST00000312438 GOLGA7BQ2TAP0 167 aa17.68■□□□□ 0.42
CLCF1-201ENST00000312438 MAP9Q49MG5 647 aa17.68■□□□□ 0.42
CLCF1-201ENST00000312438 PKDCCQ504Y2 493 aa17.68■□□□□ 0.42
CLCF1-201ENST00000312438 BEND6Q5SZJ8 279 aaPredicted RBP17.68■□□□□ 0.42
CLCF1-201ENST00000312438 XYLT1Q86Y38 959 aa17.68■□□□□ 0.42
CLCF1-201ENST00000312438 CCDC26Q8TAB7 109 aa17.68■□□□□ 0.42
CLCF1-201ENST00000312438 IPO4Q8TEX9 1081 aaKnown RBP17.68■□□□□ 0.42
CLCF1-201ENST00000312438 TNIP3Q96KP6 325 aa17.68■□□□□ 0.42
CLCF1-201ENST00000312438 SLITRK6Q9H5Y7 841 aa17.68■□□□□ 0.42
CLCF1-201ENST00000312438 RALGAPA2Q2PPJ7 1873 aa17.67■□□□□ 0.42
CLCF1-201ENST00000312438 DNM1LO00429 736 aa17.67■□□□□ 0.42
CLCF1-201ENST00000312438 CYB561D2O14569 222 aa17.67■□□□□ 0.42
CLCF1-201ENST00000312438 SEC31AO94979 1220 aaKnown RBP17.67■□□□□ 0.42
CLCF1-201ENST00000312438 ERBB2P04626 1255 aa17.67■□□□□ 0.42
CLCF1-201ENST00000312438 PFKMP08237 780 aa17.67■□□□□ 0.42
CLCF1-201ENST00000312438 PDGFRBP09619 1106 aa17.67■□□□□ 0.42
CLCF1-201ENST00000312438 SETSIPP0DME0 302 aa17.67■□□□□ 0.42
CLCF1-201ENST00000312438 LMO2P25791 158 aa17.67■□□□□ 0.42
CLCF1-201ENST00000312438 SCNN1GP51170 649 aa17.67■□□□□ 0.42
CLCF1-201ENST00000312438 AFF1P51825 1210 aaKnown RBP17.67■□□□□ 0.42
CLCF1-201ENST00000312438 SNX16P57768 344 aa17.67■□□□□ 0.42
CLCF1-201ENST00000312438 AADACL2Q6P093 401 aa17.67■□□□□ 0.42
CLCF1-201ENST00000312438 TRAF7Q6Q0C0 670 aa17.67■□□□□ 0.42
CLCF1-201ENST00000312438 MAATS1Q7Z4T9 603 aa17.67■□□□□ 0.42
CLCF1-201ENST00000312438 IFT20Q8IY31 132 aa17.67■□□□□ 0.42
CLCF1-201ENST00000312438 ADGRF2Q8IZF7 708 aa17.67■□□□□ 0.42
CLCF1-201ENST00000312438 FNIP1Q8TF40 1166 aa17.67■□□□□ 0.42
CLCF1-201ENST00000312438 MCRS1Q96EZ8 462 aa17.67■□□□□ 0.42
CLCF1-201ENST00000312438 TJP2Q9UDY2 1190 aa17.67■□□□□ 0.42
CLCF1-201ENST00000312438 GOLGA8SH3BPF8 625 aa17.66■□□□□ 0.42
CLCF1-201ENST00000312438 PODXLO00592 558 aa17.66■□□□□ 0.42
CLCF1-201ENST00000312438 RFC1P35251 1148 aaPredicted RBP17.66■□□□□ 0.42
CLCF1-201ENST00000312438 CDK7P50613 346 aa17.66■□□□□ 0.42
CLCF1-201ENST00000312438 MRPS25P82663 173 aaKnown RBP17.66■□□□□ 0.42
CLCF1-201ENST00000312438 ECHDC2Q86YB7 292 aa17.66■□□□□ 0.42
CLCF1-201ENST00000312438 SLC13A5Q86YT5 568 aaPredicted RBP17.66■□□□□ 0.42
CLCF1-201ENST00000312438 NIPA2Q8N8Q9 360 aa17.66■□□□□ 0.42
CLCF1-201ENST00000312438 RNF169Q8NCN4 708 aa17.66■□□□□ 0.42
CLCF1-201ENST00000312438 STK32AQ8WU08 396 aa17.66■□□□□ 0.42
CLCF1-201ENST00000312438 DDX27Q96GQ7 796 aaKnown RBP17.66■□□□□ 0.42
CLCF1-201ENST00000312438 UNC93B1Q9H1C4 597 aa17.66■□□□□ 0.42
CLCF1-201ENST00000312438 ST7Q9NRC1 585 aa17.66■□□□□ 0.42
CLCF1-201ENST00000312438 RGS18Q9NS28 235 aa17.66■□□□□ 0.42
CLCF1-201ENST00000312438 FAM49BQ9NUQ9 324 aa17.66■□□□□ 0.42
CLCF1-201ENST00000312438 MTUS1Q9ULD2 1270 aa17.66■□□□□ 0.42
CLCF1-201ENST00000312438 USTQ9Y2C2 406 aa17.66■□□□□ 0.42
CLCF1-201ENST00000312438 PTPN22Q9Y2R2 807 aa17.66■□□□□ 0.42
CLCF1-201ENST00000312438 RAD51CO43502 376 aa17.65■□□□□ 0.42
CLCF1-201ENST00000312438 GLI1P08151 1106 aa17.65■□□□□ 0.42
CLCF1-201ENST00000312438 SSR1P43307 286 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms