RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 JAM2P57087 298 aa19.35■□□□□ 0.69
HMGA1-201ENST00000311487 CYP27A1Q02318 531 aa19.35■□□□□ 0.69
HMGA1-201ENST00000311487 INCA1Q0VD86 236 aa19.35■□□□□ 0.69
HMGA1-201ENST00000311487 ARID5BQ14865 1188 aa19.35■□□□□ 0.69
HMGA1-201ENST00000311487 ZNF697Q5TEC3 545 aa19.35■□□□□ 0.69
HMGA1-201ENST00000311487 RNF19BQ6ZMZ0 732 aa19.35■□□□□ 0.69
HMGA1-201ENST00000311487 PPFIBP1Q86W92 1011 aa19.35■□□□□ 0.69
HMGA1-201ENST00000311487 MICALL1Q8N3F8 863 aa19.35■□□□□ 0.69
HMGA1-201ENST00000311487 TMEM176AQ96HP8 235 aa19.35■□□□□ 0.69
HMGA1-201ENST00000311487 LZTS1Q9Y250 596 aa19.35■□□□□ 0.69
HMGA1-201ENST00000311487 SOAT2O75908 522 aa19.34■□□□□ 0.69
HMGA1-201ENST00000311487 CFHP08603 1231 aa19.34■□□□□ 0.69
HMGA1-201ENST00000311487 PTPN1P18031 435 aaKnown RBP19.34■□□□□ 0.69
HMGA1-201ENST00000311487 BRD2P25440 801 aaKnown RBP19.34■□□□□ 0.69
HMGA1-201ENST00000311487 TTC9BQ8N6N2 239 aa19.34■□□□□ 0.69
HMGA1-201ENST00000311487 ATAD1Q8NBU5 361 aa19.34■□□□□ 0.69
HMGA1-201ENST00000311487 B3GALNT2Q8NCR0 500 aa19.34■□□□□ 0.69
HMGA1-201ENST00000311487 TFAP2BQ92481 460 aa19.34■□□□□ 0.69
HMGA1-201ENST00000311487 ZSWIM1Q9BR11 485 aa19.34■□□□□ 0.69
HMGA1-201ENST00000311487 IGFLR1Q9H665 355 aa19.34■□□□□ 0.69
HMGA1-201ENST00000311487 MTRRQ9UBK8 725 aa19.34■□□□□ 0.69
HMGA1-201ENST00000311487 SLC27A5Q9Y2P5 690 aa19.34■□□□□ 0.69
HMGA1-201ENST00000311487 WDR27A2RRH5 827 aa19.33■□□□□ 0.69
HMGA1-201ENST00000311487 SKILP12757 684 aa19.33■□□□□ 0.69
HMGA1-201ENST00000311487 KLRC2P26717 231 aa19.33■□□□□ 0.69
HMGA1-201ENST00000311487 ADORA2BP29275 332 aa19.33■□□□□ 0.69
HMGA1-201ENST00000311487 ADGRE1Q14246 886 aa19.33■□□□□ 0.69
HMGA1-201ENST00000311487 SMC1AQ14683 1233 aaKnown RBP19.33■□□□□ 0.69
HMGA1-201ENST00000311487 TAF3Q5VWG9 929 aa19.33■□□□□ 0.69
HMGA1-201ENST00000311487 LLGL2Q6P1M3 1020 aa19.33■□□□□ 0.69
HMGA1-201ENST00000311487 LRRC8AQ8IWT6 810 aa19.33■□□□□ 0.69
HMGA1-201ENST00000311487 STKLD1Q8NE28 680 aa19.33■□□□□ 0.69
HMGA1-201ENST00000311487 ACBD6Q9BR61 282 aa19.33■□□□□ 0.69
HMGA1-201ENST00000311487 ABI2Q9NYB9 513 aaPredicted RBP19.33■□□□□ 0.69
HMGA1-201ENST00000311487 IMPACTQ9P2X3 320 aa19.33■□□□□ 0.69
HMGA1-201ENST00000311487 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.33■□□□□ 0.69
HMGA1-201ENST00000311487 ITIH6Q6UXX5 1313 aa19.33■□□□□ 0.69
HMGA1-201ENST00000311487 COL4A4P53420 1690 aaPredicted RBP19.33■□□□□ 0.68
HMGA1-201ENST00000311487 H7C4K7 107 aa19.33■□□□□ 0.68
HMGA1-201ENST00000311487 FSCN2O14926 492 aa19.33■□□□□ 0.68
HMGA1-201ENST00000311487 TBC1D4O60343 1298 aa19.33■□□□□ 0.68
HMGA1-201ENST00000311487 KRT9P35527 623 aa19.33■□□□□ 0.68
HMGA1-201ENST00000311487 SOX5P35711 763 aa19.33■□□□□ 0.68
HMGA1-201ENST00000311487 ROR1Q01973 937 aa19.33■□□□□ 0.68
HMGA1-201ENST00000311487 UBE3AQ05086 875 aa19.33■□□□□ 0.68
HMGA1-201ENST00000311487 INTS6LQ5JSJ4 861 aaKnown RBP19.33■□□□□ 0.68
HMGA1-201ENST00000311487 ENOSF1Q7L5Y1 443 aa19.33■□□□□ 0.68
HMGA1-201ENST00000311487 FAM71AQ8IYT1 594 aa19.33■□□□□ 0.68
HMGA1-201ENST00000311487 PCED1BQ96HM7 432 aa19.33■□□□□ 0.68
HMGA1-201ENST00000311487 KLHL5Q96PQ7 755 aa19.33■□□□□ 0.68
HMGA1-201ENST00000311487 CAPN11Q9UMQ6 739 aa19.33■□□□□ 0.68
HMGA1-201ENST00000311487 LUC7L2Q9Y383 392 aaKnown RBP19.33■□□□□ 0.68
HMGA1-201ENST00000311487 ARHGEF37A1IGU5 675 aa19.32■□□□□ 0.68
HMGA1-201ENST00000311487 CARNS1A5YM72 827 aa19.32■□□□□ 0.68
HMGA1-201ENST00000311487 PAX3P23760 479 aa19.32■□□□□ 0.68
HMGA1-201ENST00000311487 PCSK1P29120 753 aa19.32■□□□□ 0.68
HMGA1-201ENST00000311487 TSPY1Q01534 308 aa19.32■□□□□ 0.68
HMGA1-201ENST00000311487 ADCY1Q08828 1119 aa19.32■□□□□ 0.68
HMGA1-201ENST00000311487 PPP1R26Q5T8A7 1209 aaPredicted RBP19.32■□□□□ 0.68
HMGA1-201ENST00000311487 PDXDC1Q6P996 788 aa19.32■□□□□ 0.68
HMGA1-201ENST00000311487 SLC2A14Q8TDB8 520 aa19.32■□□□□ 0.68
HMGA1-201ENST00000311487 NUP58Q9BVL2 599 aa19.32■□□□□ 0.68
HMGA1-201ENST00000311487 ZCWPW1Q9H0M4 648 aa19.32■□□□□ 0.68
HMGA1-201ENST00000311487 CRISPLD1Q9H336 500 aa19.32■□□□□ 0.68
HMGA1-201ENST00000311487 CDH9Q9ULB4 789 aa19.32■□□□□ 0.68
HMGA1-201ENST00000311487 UNC80Q8N2C7 3258 aa19.32■□□□□ 0.68
HMGA1-201ENST00000311487 VNN2O95498 520 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 STAT1P42224 750 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 NRIP1P48552 1158 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 YWHAEP62258 255 aaKnown RBP19.31■□□□□ 0.68
HMGA1-201ENST00000311487 TBX2Q13207 712 aaPredicted RBP19.31■□□□□ 0.68
HMGA1-201ENST00000311487 FEZF2Q8TBJ5 459 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 GPR152Q8TDT2 470 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 SLC20A1Q8WUM9 679 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 MYLPFQ96A32 169 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 JAKMIP2Q96AA8 810 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 MED10Q9BTT4 135 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 NGRNQ9NPE2 291 aaKnown RBP19.31■□□□□ 0.68
HMGA1-201ENST00000311487 COL6A3P12111 3177 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 THAP12O43422 761 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 TGM5O43548 720 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 CYP2F1P24903 491 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 GNA15P30679 374 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 ZNF132P52740 706 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 CACNA2D1P54289 1103 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 GSDMDP57764 484 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 SDHAF4Q5VUM1 108 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 UNC93AQ86WB7 457 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 PASD1Q8IV76 773 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 UBA3Q8TBC4 463 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 CYFIP2Q96F07 1278 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 PKMYT1Q99640 499 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 B3GNT5Q9BYG0 378 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 ZNF518BQ9C0D4 1074 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 ATG2AQ2TAZ0 1938 aa19.31■□□□□ 0.68
HMGA1-201ENST00000311487 PLEKP08567 350 aaPredicted RBP19.3■□□□□ 0.68
HMGA1-201ENST00000311487 RFX1P22670 979 aa19.3■□□□□ 0.68
HMGA1-201ENST00000311487 BDNFP23560 247 aa19.3■□□□□ 0.68
HMGA1-201ENST00000311487 GPR15P49685 360 aa19.3■□□□□ 0.68
HMGA1-201ENST00000311487 DUSP4Q13115 394 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms