RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 SEPT3Q9UH03 358 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 NAGPAQ9UK23 515 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 AAR2Q9Y312 384 aaKnown RBP11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 NEU2Q9Y3R4 380 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 IFT172Q9UG01 1749 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 FAM196BA6NMK8 535 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 ZC3H11AO75152 810 aaKnown RBP eCLIP11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 UCHL3P15374 230 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 FGFR4P22455 802 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 SESN2P58004 480 aaPredicted RBP11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 DEFA1P59665 94 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 DEFA3P59666 94 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 PTK7Q13308 1070 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 SF3B3Q15393 1217 aaKnown RBP11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 NAB2Q15742 525 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 GNASQ5JWF2 1037 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 CHSY1Q86X52 802 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 RSPH1Q8WYR4 309 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 RANBP17Q9H2T7 1088 aaKnown RBP11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 MYH2Q9UKX2 1941 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 ALDH18A1P54886 795 aaKnown RBP11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 PDK2Q15119 407 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 BOLA3Q53S33 107 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 FAM167BQ9BTA0 163 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 ADAM21Q9UKJ8 722 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 DCCP43146 1447 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 F5H423 210 aaPredicted RBP11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 RPL10AP62906 217 aaKnown RBP11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 STX3Q13277 289 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 PDIA6Q15084 440 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 PPIL6Q8IXY8 311 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 HS6ST3Q8IZP7 471 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 DTNBP1Q96EV8 351 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 TASP1Q9H6P5 420 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 TCP11X1B4DZS4 312 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 ATP9BO43861 1147 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 SERPINI2O75830 405 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 PDHBP11177 359 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 GUCA1AP43080 201 aaPredicted RBP11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 SPATA21Q7Z572 469 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 PDGFCQ9NRA1 345 aa11.79□□□□□ -0.52
VCPIP1-201ENST00000310421 PNPLA6Q8IY17 1366 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 ELAVL2Q12926 359 aaKnown RBP11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 ZNF211Q13398 564 aaPredicted RBP11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 BFSP2Q13515 415 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 AGAP9Q5VTM2 703 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 SUGP1Q8IWZ8 645 aaKnown RBP11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 ARMC7Q9H6L4 198 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 DTNAQ9Y4J8 743 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 F5H5T6 163 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 NFIAQ12857 509 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 MRNIPQ6NTE8 343 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 KRT78Q8N1N4 520 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 TERB1Q8NA31 727 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 MXRA8Q9BRK3 442 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 ADGRE3Q9BY15 652 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 TBX20Q9UMR3 447 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 RIMBP3CA6NJZ7 1639 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 RIMBP3BA6NNM3 1639 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 RIMBP3Q9UFD9 1639 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 LARGE1O95461 756 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 LSM8O95777 96 aaKnown RBP11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 SUPT20HL2P0C7V6 817 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 EFCAB12Q6NXP0 572 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 UNC45BQ8IWX7 931 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 SIRT2Q8IXJ6 389 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 SPATA4Q8NEY3 305 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 ROPN1BQ9BZX4 212 aaPredicted RBP11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 ROPN1Q9HAT0 212 aaPredicted RBP11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 UBQLN1Q9UMX0 589 aaKnown RBP11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 VWDEQ8N2E2 1590 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 DPYDQ12882 1025 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 USP10Q14694 798 aaKnown RBP11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 BRD8Q9H0E9 1235 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 TRMT6Q9UJA5 497 aaKnown RBP11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 CLEC16AQ2KHT3 1053 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 AGBL2Q5U5Z8 902 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 NUP93Q8N1F7 819 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 EME1Q96AY2 570 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 SCUBE2Q9NQ36 999 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 SNRPAP09012 282 aaKnown RBP11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 CTSHP09668 335 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 SERPINB8P50452 374 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 CACNB2Q08289 660 aaPredicted RBP11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 MOXD1Q6UVY6 613 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 ZNF438Q7Z4V0 828 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 CPA5Q8WXQ8 436 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 TMEM245Q9H330 911 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 CCDC134Q9H6E4 229 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 ATP1A1P05023 1023 aaKnown RBP11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 SRGNP10124 158 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 ZNF177Q13360 481 aaPredicted RBP11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 BAATQ14032 418 aaPredicted RBP11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 PARP9Q8IXQ6 854 aa11.78□□□□□ -0.52
VCPIP1-201ENST00000310421 VPS26AO75436 327 aa11.77□□□□□ -0.52
VCPIP1-201ENST00000310421 JAK1P23458 1154 aa11.77□□□□□ -0.52
VCPIP1-201ENST00000310421 BCAT1P54687 386 aa11.77□□□□□ -0.52
VCPIP1-201ENST00000310421 DNAJC7Q99615 494 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms