RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ERCC4Q92889 916 aaPredicted RBP5.39□□□□□ -1.55
CKS1B-201ENST00000308987 GSDMAQ96QA5 445 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 MTG1Q9BT17 334 aaPredicted RBP5.39□□□□□ -1.55
CKS1B-201ENST00000308987 RNF26Q9BY78 433 aaPredicted RBP5.39□□□□□ -1.55
CKS1B-201ENST00000308987 NACAP1Q9BZK3 213 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 MTIF3Q9H2K0 278 aaKnown RBP5.39□□□□□ -1.55
CKS1B-201ENST00000308987 CPVLQ9H3G5 476 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 ARFGAP3Q9NP61 516 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 FANCLQ9NW38 375 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 PARP2Q9UGN5 583 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 SUSD2Q9UGT4 822 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 ANAPC4Q9UJX5 808 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 FBXO2Q9UK22 296 aaPredicted RBP5.39□□□□□ -1.55
CKS1B-201ENST00000308987 MAN1B1Q9UKM7 699 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 CCPG1Q9ULG6 757 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 CTDP1Q9Y5B0 961 aaPredicted RBP5.39□□□□□ -1.55
CKS1B-201ENST00000308987 MRFAP1Q9Y605 127 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 SLC12A7Q9Y666 1083 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 EVPLQ92817 2033 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 COL4A6Q14031 1691 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 ITIH6Q6UXX5 1313 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 KMT2EQ8IZD2 1858 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 ZNF292O60281 2723 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 FAM186AA6NE01 2351 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 A0A087WWV3 80 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.38□□□□□ -1.55
CKS1B-201ENST00000308987 ERICH2A1L162 156 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 FADS2P1A8MWK0 482 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 AKR1B15C9JRZ8 316 aaPredicted RBP5.38□□□□□ -1.55
CKS1B-201ENST00000308987 PI4K2BG5E9Z4 385 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 ZEB2O60315 1214 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 RANBP6O60518 1105 aaKnown RBP5.38□□□□□ -1.55
CKS1B-201ENST00000308987 NBNO60934 754 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 APPP05067 770 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 PFKMP08237 780 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 CCDC175P0C221 793 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 CDK11BP21127 795 aaKnown RBP5.38□□□□□ -1.55
CKS1B-201ENST00000308987 PBX1P40424 430 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 WDR5P61964 334 aaKnown RBP5.38□□□□□ -1.55
CKS1B-201ENST00000308987 RPS6P62753 249 aaKnown RBP5.38□□□□□ -1.55
CKS1B-201ENST00000308987 ARHGAP1Q07960 439 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 SLC20A2Q08357 652 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 KCNA1Q09470 495 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 IKQ13123 557 aaPredicted RBP5.38□□□□□ -1.55
CKS1B-201ENST00000308987 TRIM71Q2Q1W2 868 aaKnown RBP5.38□□□□□ -1.55
CKS1B-201ENST00000308987 FILIP1LQ4L180 1135 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 ARSHQ5FYA8 562 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 SYDE2Q5VT97 1194 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 CPZQ66K79 652 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 CC2D1AQ6P1N0 951 aaPredicted RBP5.38□□□□□ -1.55
CKS1B-201ENST00000308987 NFRKBQ6P4R8 1299 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 MFSD6Q6ZSS7 791 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 TMC3Q7Z5M5 1100 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 CNGA4Q8IV77 575 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 DIS3L2Q8IYB7 885 aaKnown RBP5.38□□□□□ -1.55
CKS1B-201ENST00000308987 FAM177A1Q8N128 213 aaPredicted RBP5.38□□□□□ -1.55
CKS1B-201ENST00000308987 MSANTD4Q8NCY6 345 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 OR6J1Q8NGC5 347 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 PHOSPHO2Q8TCD6 241 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 RBM15Q96T37 977 aaKnown RBP eCLIP5.38□□□□□ -1.55
CKS1B-201ENST00000308987 SLC9A7Q96T83 725 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 TMEM47Q9BQJ4 181 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 CDADC1Q9BWV3 514 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 CARD6Q9BX69 1037 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 C1QTNF1Q9BXJ1 281 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 SEZ6LQ9BYH1 1024 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 KRTAP3-1Q9BYR8 98 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 GBP3Q9H0R5 595 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 NAPBQ9H115 298 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 INTS13Q9NVM9 706 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.38□□□□□ -1.55
CKS1B-201ENST00000308987 COL20A1Q9P218 1284 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 TNFRSF10DQ9UBN6 386 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 STX8Q9UNK0 236 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 NFE2L3Q9Y4A8 694 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 FRMPD2Q68DX3 1309 aaPredicted RBP5.38□□□□□ -1.55
CKS1B-201ENST00000308987 PLXNA4Q9HCM2 1894 aa5.38□□□□□ -1.55
CKS1B-201ENST00000308987 LINC01553A4QN01 128 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 ANKRD33BA6NCL7 494 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 B4E1Z4 1266 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 MAP2K7O14733 419 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 PRPF3O43395 683 aaKnown RBP5.37□□□□□ -1.55
CKS1B-201ENST00000308987 ORC4O43929 436 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 KIF5CO60282 957 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 ERLIN1O75477 346 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 CXCL10P02778 98 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 CALM1P0DP23 149 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 CALM2P0DP24 149 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 CALM3P0DP25 149 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 SNHG28P0DPA3 235 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 PDHBP11177 359 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 IL9P15248 144 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 PRKCAP17252 672 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 PFKLP17858 780 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 CALML3P27482 149 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 CNR2P34972 360 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 RFC2P35250 354 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 TRAPPC10P48553 1259 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 CPT1AP50416 773 aa5.37□□□□□ -1.55
CKS1B-201ENST00000308987 TOB1P50616 345 aaPredicted RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms