RNA–Protein interactions for RNA: ENST00000303903.10

SYCE1-201, Transcript of synaptonemal complex central element protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYCE1, Length 1,011 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1-201ENST00000303903 PPP3CAQ08209 521 aa13.34□□□□□ -0.27
SYCE1-201ENST00000303903 ZNF699Q32M78 642 aa13.34□□□□□ -0.27
SYCE1-201ENST00000303903 ANKRD40Q6AI12 368 aa13.34□□□□□ -0.27
SYCE1-201ENST00000303903 CLEC17AQ6ZS10 378 aa13.34□□□□□ -0.27
SYCE1-201ENST00000303903 MTSS1LQ765P7 747 aa13.34□□□□□ -0.27
SYCE1-201ENST00000303903 ITIH5Q86UX2 942 aa13.34□□□□□ -0.27
SYCE1-201ENST00000303903 ZC3H3Q8IXZ2 948 aaKnown RBP13.34□□□□□ -0.27
SYCE1-201ENST00000303903 PBXIP1Q96AQ6 731 aa13.34□□□□□ -0.27
SYCE1-201ENST00000303903 ELMO3Q96BJ8 720 aa13.34□□□□□ -0.27
SYCE1-201ENST00000303903 TSG101Q99816 390 aa13.34□□□□□ -0.27
SYCE1-201ENST00000303903 SYT15Q9BQS2 421 aa13.34□□□□□ -0.27
SYCE1-201ENST00000303903 PI4K2AQ9BTU6 479 aa13.34□□□□□ -0.27
SYCE1-201ENST00000303903 ZNF334Q9HCZ1 680 aaPredicted RBP13.34□□□□□ -0.27
SYCE1-201ENST00000303903 ABCB6Q9NP58 842 aa13.34□□□□□ -0.27
SYCE1-201ENST00000303903 CRTAC1Q9NQ79 661 aa13.34□□□□□ -0.27
SYCE1-201ENST00000303903 CDH9Q9ULB4 789 aa13.34□□□□□ -0.27
SYCE1-201ENST00000303903 TRIM49BA6NDI0 452 aa13.33□□□□□ -0.28
SYCE1-201ENST00000303903 PDGFRBP09619 1106 aa13.33□□□□□ -0.28
SYCE1-201ENST00000303903 TRIM49P0CI25 452 aa13.33□□□□□ -0.28
SYCE1-201ENST00000303903 TRIM49CP0CI26 452 aa13.33□□□□□ -0.28
SYCE1-201ENST00000303903 SRFP11831 508 aa13.33□□□□□ -0.28
SYCE1-201ENST00000303903 GJA1P17302 382 aa13.33□□□□□ -0.28
SYCE1-201ENST00000303903 COL9A1P20849 921 aa13.33□□□□□ -0.28
SYCE1-201ENST00000303903 CCNE1P24864 410 aa13.33□□□□□ -0.28
SYCE1-201ENST00000303903 CYP2F1P24903 491 aa13.33□□□□□ -0.28
SYCE1-201ENST00000303903 GNL1P36915 607 aaPredicted RBP13.33□□□□□ -0.28
SYCE1-201ENST00000303903 GCLMP48507 274 aa13.33□□□□□ -0.28
SYCE1-201ENST00000303903 PSMC1P62191 440 aaKnown RBP13.33□□□□□ -0.28
SYCE1-201ENST00000303903 FKBP3Q00688 224 aaKnown RBP13.33□□□□□ -0.28
SYCE1-201ENST00000303903 LRRC63Q05C16 580 aa13.33□□□□□ -0.28
SYCE1-201ENST00000303903 MORC3Q14149 939 aa13.33□□□□□ -0.28
SYCE1-201ENST00000303903 TEAD2Q15562 447 aa13.33□□□□□ -0.28
SYCE1-201ENST00000303903 SGSM1Q2NKQ1 1148 aa13.33□□□□□ -0.28
SYCE1-201ENST00000303903 CFAP221Q4G0U5 840 aa13.33□□□□□ -0.28
SYCE1-201ENST00000303903 ZNF667Q5HYK9 610 aa13.33□□□□□ -0.28
SYCE1-201ENST00000303903 SPATA2LQ8IUW3 424 aaPredicted RBP13.33□□□□□ -0.28
SYCE1-201ENST00000303903 OR6B3Q8NGW1 331 aa13.33□□□□□ -0.28
SYCE1-201ENST00000303903 SHKBP1Q8TBC3 707 aa13.33□□□□□ -0.28
SYCE1-201ENST00000303903 FAM200AQ8TCP9 573 aa13.33□□□□□ -0.28
SYCE1-201ENST00000303903 GIPC2Q8TF65 315 aa13.33□□□□□ -0.28
SYCE1-201ENST00000303903 TAF4BQ92750 862 aa13.33□□□□□ -0.28
SYCE1-201ENST00000303903 DHTKD1Q96HY7 919 aaPredicted RBP13.33□□□□□ -0.28
SYCE1-201ENST00000303903 FUBP3Q96I24 572 aaKnown RBP eCLIP13.33□□□□□ -0.28
SYCE1-201ENST00000303903 ZSWIM3Q96MP5 696 aa13.33□□□□□ -0.28
SYCE1-201ENST00000303903 SNX25Q9H3E2 840 aa13.33□□□□□ -0.28
SYCE1-201ENST00000303903 A0A1W2PRU2 124 aa13.32□□□□□ -0.28
SYCE1-201ENST00000303903 PPP1R3GB7ZBB8 358 aa13.32□□□□□ -0.28
SYCE1-201ENST00000303903 PSMA7O14818 248 aa13.32□□□□□ -0.28
SYCE1-201ENST00000303903 ASS1P00966 412 aaKnown RBP13.32□□□□□ -0.28
SYCE1-201ENST00000303903 PDGFBP01127 241 aaPredicted RBP13.32□□□□□ -0.28
SYCE1-201ENST00000303903 HLA-DRAP01903 254 aa13.32□□□□□ -0.28
SYCE1-201ENST00000303903 EPB41P11171 864 aaKnown RBP13.32□□□□□ -0.28
SYCE1-201ENST00000303903 FCARP24071 287 aa13.32□□□□□ -0.28
SYCE1-201ENST00000303903 PPP1R2P41236 205 aa13.32□□□□□ -0.28
SYCE1-201ENST00000303903 GPR15P49685 360 aa13.32□□□□□ -0.28
SYCE1-201ENST00000303903 CDH8P55286 799 aa13.32□□□□□ -0.28
SYCE1-201ENST00000303903 STIM1Q13586 685 aa13.32□□□□□ -0.28
SYCE1-201ENST00000303903 VEPH1Q14D04 833 aa13.32□□□□□ -0.28
SYCE1-201ENST00000303903 FAM78AQ5JUQ0 283 aa13.32□□□□□ -0.28
SYCE1-201ENST00000303903 GAREM2Q75VX8 874 aa13.32□□□□□ -0.28
SYCE1-201ENST00000303903 MYCBPAPQ8TBZ2 947 aa13.32□□□□□ -0.28
SYCE1-201ENST00000303903 GPR152Q8TDT2 470 aa13.32□□□□□ -0.28
SYCE1-201ENST00000303903 TAS1R2Q8TE23 839 aa13.32□□□□□ -0.28
SYCE1-201ENST00000303903 MYLPFQ96A32 169 aa13.32□□□□□ -0.28
SYCE1-201ENST00000303903 ASB16Q96NS5 453 aa13.32□□□□□ -0.28
SYCE1-201ENST00000303903 SDCBP2Q9H190 292 aa13.32□□□□□ -0.28
SYCE1-201ENST00000303903 SMYD3Q9H7B4 428 aa13.32□□□□□ -0.28
SYCE1-201ENST00000303903 IL21Q9HBE4 155 aa13.32□□□□□ -0.28
SYCE1-201ENST00000303903 PTPRDP23468 1912 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 A8MXQ7 604 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 BIN1O00499 593 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 SLC16A3O15427 465 aaKnown RBP13.31□□□□□ -0.28
SYCE1-201ENST00000303903 ECI2O75521 394 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 FGF19O95750 216 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 CFHP08603 1231 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 HMGA1P17096 107 aaKnown RBP13.31□□□□□ -0.28
SYCE1-201ENST00000303903 PTPN1P18031 435 aaKnown RBP13.31□□□□□ -0.28
SYCE1-201ENST00000303903 GABRR2P28476 465 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 GTF2H1P32780 548 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 PIK3CAP42336 1068 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 RAP1GAPP47736 663 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 RPL10AP62906 217 aaKnown RBP13.31□□□□□ -0.28
SYCE1-201ENST00000303903 MAPRE1Q15691 268 aaKnown RBP13.31□□□□□ -0.28
SYCE1-201ENST00000303903 CAMK4Q16566 473 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 DDR2Q16832 855 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 SDHAF4Q5VUM1 108 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 KRT39Q6A163 491 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 TANGO2Q6ICL3 276 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 SPOPLQ6IQ16 392 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 C4orf50Q6ZRC1 276 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 FBXL6Q8N531 539 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 ELSPBP1Q96BH3 223 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 PCED1BQ96HM7 432 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 KXD1Q9BQD3 176 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 PLA2G2FQ9BZM2 168 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 GPR88Q9GZN0 384 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 ATXN3LQ9H3M9 355 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 DPEP3Q9H4B8 488 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 MMRN2Q9H8L6 949 aa13.31□□□□□ -0.28
SYCE1-201ENST00000303903 TMEM8AQ9HCN3 771 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms