RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 FNTAP49354 379 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 RAB27AP51159 221 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 DRG2P55039 364 aaKnown RBP11.2□□□□□ -0.62
CLP1-201ENST00000302731 SNX16P57768 344 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 RPL7AP62424 266 aaKnown RBP11.2□□□□□ -0.62
CLP1-201ENST00000302731 PDCLQ13371 301 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 ACAP1Q15027 740 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 PTGISQ16647 500 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 SOWAHAQ2M3V2 549 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 FAM26DQ5JW98 314 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 PHLDB2Q86SQ0 1253 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 CPNE8Q86YQ8 564 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 CRYBG2Q8N1P7 616 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 CD99L2Q8TCZ2 262 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 IPO4Q8TEX9 1081 aaKnown RBP11.2□□□□□ -0.62
CLP1-201ENST00000302731 STK32AQ8WU08 396 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 CASKIN2Q8WXE0 1202 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 WNT8BQ93098 351 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 MCRS1Q96EZ8 462 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 MCEEQ96PE7 176 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 PPP1R10Q96QC0 940 aaKnown RBP11.2□□□□□ -0.62
CLP1-201ENST00000302731 TSEN34Q9BSV6 310 aaKnown RBP11.2□□□□□ -0.62
CLP1-201ENST00000302731 RNF39Q9H2S5 420 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 LRRC19Q9H756 370 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 HOMER3Q9NSC5 361 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 AMACRQ9UHK6 382 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 CYTH4Q9UIA0 394 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 RASAL2Q9UJF2 1139 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 TSPAN16Q9UKR8 245 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 GIT1Q9Y2X7 761 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 UTP11Q9Y3A2 253 aaKnown RBP11.2□□□□□ -0.62
CLP1-201ENST00000302731 NR2E1Q9Y466 385 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 SPDYE4A6NLX3 237 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 PODXLO00592 558 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 ZNF623O75123 536 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 TRPA1O75762 1119 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 GBP1P32455 592 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 CARSP49589 748 aaKnown RBP11.2□□□□□ -0.62
CLP1-201ENST00000302731 PSMC1P62191 440 aaKnown RBP11.2□□□□□ -0.62
CLP1-201ENST00000302731 MRPS25P82663 173 aaKnown RBP11.2□□□□□ -0.62
CLP1-201ENST00000302731 DR1Q01658 176 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 ITGA7Q13683 1181 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 SIX1Q15475 284 aaPredicted RBP11.2□□□□□ -0.62
CLP1-201ENST00000302731 PKDCCQ504Y2 493 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 AADACL2Q6P093 401 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 POLNQ7Z5Q5 900 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 MRPL10Q7Z7H8 261 aaKnown RBP11.2□□□□□ -0.62
CLP1-201ENST00000302731 XYLT1Q86Y38 959 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 MREGQ8N565 214 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 TOP6BLQ8N6T0 577 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 ARRDC4Q8NCT1 418 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 RAET1EQ8TD07 263 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 SLCO2A1Q92959 643 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 RBM41Q96IZ5 413 aaKnown RBP11.2□□□□□ -0.62
CLP1-201ENST00000302731 CPXM1Q96SM3 734 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 MRPL45Q9BRJ2 306 aaKnown RBP11.2□□□□□ -0.62
CLP1-201ENST00000302731 ERVK-5Q9HDB9 667 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 FAM114A2Q9NRY5 505 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 KLK14Q9P0G3 267 aa11.2□□□□□ -0.62
CLP1-201ENST00000302731 PTGESO14684 152 aa11.19□□□□□ -0.62
CLP1-201ENST00000302731 ERBB2P04626 1255 aa11.19□□□□□ -0.62
CLP1-201ENST00000302731 SKIP12755 728 aa11.19□□□□□ -0.62
CLP1-201ENST00000302731 PTPN7P35236 360 aa11.19□□□□□ -0.62
CLP1-201ENST00000302731 THPOP40225 353 aa11.19□□□□□ -0.62
CLP1-201ENST00000302731 TNNT3P45378 269 aaPredicted RBP11.19□□□□□ -0.62
CLP1-201ENST00000302731 AARSP49588 968 aaKnown RBP eCLIP11.19□□□□□ -0.62
CLP1-201ENST00000302731 ACLYP53396 1101 aa11.19□□□□□ -0.62
CLP1-201ENST00000302731 TAS2R40P59535 323 aa11.19□□□□□ -0.62
CLP1-201ENST00000302731 COPS2P61201 443 aa11.19□□□□□ -0.62
CLP1-201ENST00000302731 SOX4Q06945 474 aaPredicted RBP11.19□□□□□ -0.62
CLP1-201ENST00000302731 ZNF252P-AS1Q0IIN9 211 aa11.19□□□□□ -0.62
CLP1-201ENST00000302731 NFX1Q12986 1120 aaKnown RBP11.19□□□□□ -0.62
CLP1-201ENST00000302731 ORC1Q13415 861 aa11.19□□□□□ -0.62
CLP1-201ENST00000302731 SMC1AQ14683 1233 aaKnown RBP11.19□□□□□ -0.62
CLP1-201ENST00000302731 CYP4A22Q5TCH4 519 aa11.19□□□□□ -0.62
CLP1-201ENST00000302731 ZDHHC17Q8IUH5 632 aa11.19□□□□□ -0.62
CLP1-201ENST00000302731 RCOR2Q8IZ40 523 aa11.19□□□□□ -0.62
CLP1-201ENST00000302731 SLAIN1Q8ND83 568 aa11.19□□□□□ -0.62
CLP1-201ENST00000302731 APPL2Q8NEU8 664 aa11.19□□□□□ -0.62
CLP1-201ENST00000302731 KBTBD7Q8WVZ9 684 aa11.19□□□□□ -0.62
CLP1-201ENST00000302731 MAGOHBQ96A72 148 aaKnown RBP11.19□□□□□ -0.62
CLP1-201ENST00000302731 FAM129AQ9BZQ8 928 aa11.19□□□□□ -0.62
CLP1-201ENST00000302731 SYNCQ9H7C4 482 aa11.19□□□□□ -0.62
CLP1-201ENST00000302731 MED4Q9NPJ6 270 aa11.19□□□□□ -0.62
CLP1-201ENST00000302731 CYLDQ9NQC7 956 aa11.19□□□□□ -0.62
CLP1-201ENST00000302731 DDX56Q9NY93 547 aaKnown RBP11.19□□□□□ -0.62
CLP1-201ENST00000302731 HESX1Q9UBX0 185 aa11.19□□□□□ -0.62
CLP1-201ENST00000302731 FEZ2Q9UHY8 353 aaPredicted RBP11.19□□□□□ -0.62
CLP1-201ENST00000302731 HPCAL4Q9UM19 191 aa11.19□□□□□ -0.62
CLP1-201ENST00000302731 NFU1Q9UMS0 254 aa11.19□□□□□ -0.62
CLP1-201ENST00000302731 ZSCAN5CA6NGD5 496 aaPredicted RBP11.18□□□□□ -0.62
CLP1-201ENST00000302731 A8MXQ7 604 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 TTI1O43156 1089 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 HUS1O60921 280 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 PFKMP08237 780 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 CTSHP09668 335 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 RARAP10276 462 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 WARSP23381 471 aaKnown RBP11.18□□□□□ -0.62
CLP1-201ENST00000302731 PAX3P23760 479 aa11.18□□□□□ -0.62
CLP1-201ENST00000302731 RFC1P35251 1148 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms