RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 TMEM86AQ8N2M4 240 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 MSANTD4Q8NCY6 345 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 MNS1Q8NEH6 495 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 UBA3Q8TBC4 463 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 OSBPL9Q96SU4 736 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 MRPL47Q9HD33 250 aaKnown RBP13.76□□□□□ -0.21
CCDC7-202ENST00000302316 TBC1D13Q9NVG8 400 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.76□□□□□ -0.21
CCDC7-202ENST00000302316 I3L4J1 428 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 B4GALT3O60512 393 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 DDHD2O94830 711 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 FAM163BP0C2L3 166 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 TCP1P17987 556 aaKnown RBP13.76□□□□□ -0.21
CCDC7-202ENST00000302316 MESDQ14696 234 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 RPS6KA1Q15418 735 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 PTPN20Q4JDL3 420 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 ZNF280BQ86YH2 543 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 CRYBG2Q8N1P7 616 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 BTBD6Q96KE9 485 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 CAPZA3Q96KX2 299 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 FAM193BQ96PV7 902 aaPredicted RBP13.76□□□□□ -0.21
CCDC7-202ENST00000302316 SYNCQ9H7C4 482 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 PRDM5Q9NQX1 630 aaPredicted RBP13.76□□□□□ -0.21
CCDC7-202ENST00000302316 DDX43Q9NXZ2 648 aaKnown RBP13.76□□□□□ -0.21
CCDC7-202ENST00000302316 HESX1Q9UBX0 185 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 CYTH4Q9UIA0 394 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 ANAPC7Q9UJX3 599 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 AMFRQ9UKV5 643 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 STRIP2Q9ULQ0 834 aa13.76□□□□□ -0.21
CCDC7-202ENST00000302316 TIMM13Q9Y5L4 95 aaPredicted RBP13.76□□□□□ -0.21
CCDC7-202ENST00000302316 GABRDO14764 452 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 HOXA2O43364 376 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 KIF4AO95239 1232 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 CCDC130P13994 396 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 PRLRP16471 622 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 CXCR5P32302 372 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 GPD2P43304 727 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 BRCC3P46736 316 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 PSMC1P62191 440 aaKnown RBP13.75□□□□□ -0.21
CCDC7-202ENST00000302316 DSC1Q08554 894 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 PDCLQ13371 301 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 CYP4A22Q5TCH4 519 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 ARHGAP17Q68EM7 881 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 PLEKHA7Q6IQ23 1121 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 DCLRE1AQ6PJP8 1040 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 NT5DC3Q86UY8 548 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 B3GALNT2Q8NCR0 500 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 LPIN3Q9BQK8 851 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 ABCB6Q9NP58 842 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 PARVAQ9NVD7 372 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 ZNF185O15231 689 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 CAPN2P17655 700 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 PAX3P23760 479 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 ACAT1P24752 427 aaKnown RBP13.75□□□□□ -0.21
CCDC7-202ENST00000302316 OR1G1P47890 313 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 LHX1P48742 406 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 GATMP50440 423 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 DNAJC24Q6P3W2 148 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 CNKSR3Q6P9H4 555 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 COLGALT2Q8IYK4 626 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 CEP112Q8N8E3 955 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 LRRN4CLQ8ND94 238 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 IPO4Q8TEX9 1081 aaKnown RBP13.75□□□□□ -0.21
CCDC7-202ENST00000302316 CPXM1Q96SM3 734 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 ST7Q9NRC1 585 aa13.75□□□□□ -0.21
CCDC7-202ENST00000302316 KIAA0100Q14667 2235 aaKnown RBP13.75□□□□□ -0.21
CCDC7-202ENST00000302316 F8W810 466 aa13.74□□□□□ -0.21
CCDC7-202ENST00000302316 ITGB1P05556 798 aa13.74□□□□□ -0.21
CCDC7-202ENST00000302316 ADORA2BP29275 332 aa13.74□□□□□ -0.21
CCDC7-202ENST00000302316 RFC2P35250 354 aa13.74□□□□□ -0.21
CCDC7-202ENST00000302316 MAMLD1Q13495 774 aa13.74□□□□□ -0.21
CCDC7-202ENST00000302316 CD300LGQ6UXG3 332 aa13.74□□□□□ -0.21
CCDC7-202ENST00000302316 TTC30AQ86WT1 665 aa13.74□□□□□ -0.21
CCDC7-202ENST00000302316 METTL23Q86XA0 190 aa13.74□□□□□ -0.21
CCDC7-202ENST00000302316 NPAS4Q8IUM7 802 aa13.74□□□□□ -0.21
CCDC7-202ENST00000302316 COG1Q8WTW3 980 aa13.74□□□□□ -0.21
CCDC7-202ENST00000302316 RSPH1Q8WYR4 309 aa13.74□□□□□ -0.21
CCDC7-202ENST00000302316 CASD1Q96PB1 797 aa13.74□□□□□ -0.21
CCDC7-202ENST00000302316 RNF216Q9NWF9 866 aaPredicted RBP13.74□□□□□ -0.21
CCDC7-202ENST00000302316 TJP2Q9UDY2 1190 aa13.74□□□□□ -0.21
CCDC7-202ENST00000302316 PRG3Q9Y2Y8 225 aaPredicted RBP13.74□□□□□ -0.21
CCDC7-202ENST00000302316 ALG6Q9Y672 507 aa13.74□□□□□ -0.21
CCDC7-202ENST00000302316 KCNK3O14649 394 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 GJB6O95452 261 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 PFKMP08237 780 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 GTF2F1P35269 517 aaKnown RBP eCLIP13.73□□□□□ -0.21
CCDC7-202ENST00000302316 CKAP4Q07065 602 aaKnown RBP13.73□□□□□ -0.21
CCDC7-202ENST00000302316 IKBKEQ14164 716 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 C3orf20Q8ND61 904 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 SLC2A14Q8TDB8 520 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 C18orf8Q96DM3 657 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 HES6Q96HZ4 224 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 SYT15Q9BQS2 421 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 TRIM7Q9C029 511 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 MCOLN1Q9GZU1 580 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 DNAJB4Q9UDY4 337 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 DSEQ9UL01 958 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 TSC2P49815 1807 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 ARHGEF37A1IGU5 675 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 GOLGA8SH3BPF8 625 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms