RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 TRAFD1O14545 582 aaPredicted RBP15.13■□□□□ 0.01
CDT1-201ENST00000301019 EMP3P54852 163 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 CDK16Q00536 496 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 DHDDSQ86SQ9 333 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 ICA1LQ8NDH6 482 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 ARHGEF4Q9NR80 690 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 COL5A3P25940 1745 aaPredicted RBP15.13■□□□□ 0.01
CDT1-201ENST00000301019 CAMTA2O94983 1202 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 NCKAP1LP55160 1127 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 STAT4Q14765 748 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 OGFOD2Q6N063 350 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 SMIM5Q71RC9 77 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 MYCT1Q8N699 235 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 OLIG1Q8TAK6 271 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 CRNKL1Q9BZJ0 848 aaKnown RBP15.13■□□□□ 0.01
CDT1-201ENST00000301019 TLE6Q9H808 572 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 SAR1AQ9NR31 198 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 SPECC1L-ADORA2AF8WAN1 911 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 FAM155BO75949 473 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 PROCP04070 461 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 AQP5P55064 265 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 ITGA7Q13683 1181 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 FASTKD5Q7L8L6 764 aaKnown RBP15.13■□□□□ 0.01
CDT1-201ENST00000301019 PDSS2Q86YH6 399 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 ZSWIM2Q8NEG5 633 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 SENP6Q9GZR1 1112 aaPredicted RBP15.13■□□□□ 0.01
CDT1-201ENST00000301019 TMEM117Q9H0C3 514 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 KCNK13Q9HB14 408 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 TRNAU1APQ9NX07 287 aaKnown RBP15.13■□□□□ 0.01
CDT1-201ENST00000301019 PCDHA2Q9Y5H9 948 aa15.13■□□□□ 0.01
CDT1-201ENST00000301019 SBF2Q86WG5 1849 aa15.12■□□□□ 0.01
CDT1-201ENST00000301019 EDIL3O43854 480 aa15.12■□□□□ 0.01
CDT1-201ENST00000301019 E2F6O75461 281 aa15.12■□□□□ 0.01
CDT1-201ENST00000301019 TRMUO75648 421 aaKnown RBP15.12■□□□□ 0.01
CDT1-201ENST00000301019 TMED10P49755 219 aaKnown RBP15.12■□□□□ 0.01
CDT1-201ENST00000301019 TBL3Q12788 808 aaKnown RBP15.12■□□□□ 0.01
CDT1-201ENST00000301019 RINT1Q6NUQ1 792 aa15.12■□□□□ 0.01
CDT1-201ENST00000301019 ZNF34Q8IZ26 560 aa15.12■□□□□ 0.01
CDT1-201ENST00000301019 ARHGAP24Q8N264 748 aa15.12■□□□□ 0.01
CDT1-201ENST00000301019 DHX38Q92620 1227 aaKnown RBP15.12■□□□□ 0.01
CDT1-201ENST00000301019 SENP7Q9BQF6 1050 aa15.12■□□□□ 0.01
CDT1-201ENST00000301019 AFG3L2Q9Y4W6 797 aa15.12■□□□□ 0.01
CDT1-201ENST00000301019 PDLIM1O00151 329 aa15.12■□□□□ 0.01
CDT1-201ENST00000301019 LPXNO60711 386 aa15.12■□□□□ 0.01
CDT1-201ENST00000301019 ALAS1P13196 640 aa15.12■□□□□ 0.01
CDT1-201ENST00000301019 TCN1P20061 433 aaPredicted RBP15.12■□□□□ 0.01
CDT1-201ENST00000301019 CRABP2P29373 138 aa15.12■□□□□ 0.01
CDT1-201ENST00000301019 FMO5P49326 533 aa15.12■□□□□ 0.01
CDT1-201ENST00000301019 NPEPPSP55786 919 aa15.12■□□□□ 0.01
CDT1-201ENST00000301019 CNGA3Q16281 694 aa15.12■□□□□ 0.01
CDT1-201ENST00000301019 RHBDF2Q6PJF5 856 aa15.12■□□□□ 0.01
CDT1-201ENST00000301019 ZNF512Q96ME7 567 aaPredicted RBP15.12■□□□□ 0.01
CDT1-201ENST00000301019 SLX1AQ9BQ83 275 aa15.12■□□□□ 0.01
CDT1-201ENST00000301019 PAIP1Q9H074 479 aaKnown RBP15.12■□□□□ 0.01
CDT1-201ENST00000301019 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.12■□□□□ 0.01
CDT1-201ENST00000301019 GOLGA8IPA6NC78 632 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 GOLGA8JA6NMD2 632 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 BUD23O43709 281 aaKnown RBP15.11■□□□□ 0.01
CDT1-201ENST00000301019 TMPRSS15P98073 1019 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 LPIN1Q14693 890 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 NRF1Q16656 503 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 TMEM259Q4ZIN3 620 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 PRR16Q569H4 304 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 RC3H1Q5TC82 1133 aaKnown RBP15.11■□□□□ 0.01
CDT1-201ENST00000301019 PASD1Q8IV76 773 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 ZNF512BQ96KM6 892 aaPredicted RBP15.11■□□□□ 0.01
CDT1-201ENST00000301019 CENPOQ9BU64 300 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 APOL6Q9BWW8 343 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 GPR88Q9GZN0 384 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 PTTG2Q9NZH5 202 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 WHRNQ9P202 907 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 TRIM17Q9Y577 477 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 A6NL46 340 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 EIF2B2P49770 351 aaKnown RBP15.11■□□□□ 0.01
CDT1-201ENST00000301019 ARSEP51690 589 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 VCPP55072 806 aaKnown RBP15.11■□□□□ 0.01
CDT1-201ENST00000301019 CDH15P55291 814 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 GRM4Q14833 912 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 PSMD6Q15008 389 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 BBS9Q3SYG4 887 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 ARHGAP27Q6ZUM4 889 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 TMC7Q7Z402 723 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 PATL1Q86TB9 770 aaKnown RBP15.11■□□□□ 0.01
CDT1-201ENST00000301019 CTAGE3PQ8IX95 158 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 CCDC127Q96BQ5 260 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 FBXO3Q9UK99 471 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 BRWD3Q6RI45 1802 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 MIF4GDA9UHW6 222 aaKnown RBP15.11■□□□□ 0.01
CDT1-201ENST00000301019 TBCAO75347 108 aaKnown RBP15.11■□□□□ 0.01
CDT1-201ENST00000301019 SRGAP2CP0DJJ0 459 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 SMIM18P0DKX4 95 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 SRGAP2BP0DMP2 458 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 RXRBP28702 533 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 MAPK4P31152 587 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 RCVRNP35243 200 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 ADCY7P51828 1080 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 ACTR3P61158 418 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 YWHAGP61981 247 aaKnown RBP eCLIP15.11■□□□□ 0.01
CDT1-201ENST00000301019 MYL7Q01449 175 aa15.11■□□□□ 0.01
CDT1-201ENST00000301019 HIC1Q14526 733 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms