RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 ITIH4Q14624 930 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 SPOCD1Q6ZMY3 1216 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 RASSF3Q86WH2 238 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 CCDC60Q8IWA6 550 aaPredicted RBP13.93□□□□□ -0.18
CASC4-201ENST00000299957 FITM2Q8N6M3 262 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 CEP120Q8N960 986 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 TTC8Q8TAM2 541 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 GRAMD1AQ96CP6 724 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 MTBPQ96DY7 904 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 DDX50Q9BQ39 737 aaKnown RBP13.93□□□□□ -0.18
CASC4-201ENST00000299957 NDE1Q9NXR1 346 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 NUB1Q9Y5A7 615 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 NID2Q14112 1375 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 A8MXQ7 604 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 AIM2O14862 343 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 VIL1P09327 827 aaKnown RBP13.93□□□□□ -0.18
CASC4-201ENST00000299957 SNHG28P0DPA3 235 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 PLCB4Q15147 1175 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 PGBD4Q96DM1 585 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 NAF1Q96HR8 494 aaKnown RBP13.93□□□□□ -0.18
CASC4-201ENST00000299957 SNX25Q9H3E2 840 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 RXFP1Q9HBX9 757 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 ACSS2Q9NR19 701 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 TLK1Q9UKI8 766 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 C15orf41Q9Y2V0 281 aa13.93□□□□□ -0.18
CASC4-201ENST00000299957 ASAP2O43150 1006 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 ANGEL2Q5VTE6 544 aaKnown RBP13.92□□□□□ -0.18
CASC4-201ENST00000299957 TTC13Q8NBP0 860 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 MAGEB18Q96M61 343 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 TEX13BQ9BXU2 312 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 UMODL1Q5DID0 1318 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 SLIT3O75094 1523 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 CCDC22O60826 627 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 TMEM259Q4ZIN3 620 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 DPP9Q86TI2 863 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 FAM71AQ8IYT1 594 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 PCDHA2Q9Y5H9 948 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 MYH13Q9UKX3 1938 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 GOLGA8QA0A0J9YX86 632 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 GOLGA8OA6NCC3 632 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 GOLGA8NF8WBI6 632 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 WDR46O15213 610 aaKnown RBP13.92□□□□□ -0.18
CASC4-201ENST00000299957 MT-CO1P00395 513 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 CFHP08603 1231 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 TNFSF9P41273 254 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 MMP13P45452 471 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 CACNB2Q08289 660 aaPredicted RBP13.92□□□□□ -0.18
CASC4-201ENST00000299957 MMRN1Q13201 1228 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 PGM5Q15124 567 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 TFDP3Q5H9I0 405 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 C16orf46Q6P387 395 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 BTNL9Q6UXG8 535 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 TRIM72Q6ZMU5 477 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 ABRAQ8N0Z2 381 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 GALNT4Q8N4A0 578 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 CEP70Q8NHQ1 597 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 COL20A1Q9P218 1284 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 ZFATQ9P243 1243 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 CNOT7Q9UIV1 285 aaKnown RBP13.92□□□□□ -0.18
CASC4-201ENST00000299957 MYH15Q9Y2K3 1946 aa13.92□□□□□ -0.18
CASC4-201ENST00000299957 P4HA2O15460 535 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 ATP5HO75947 161 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 CSPG5O95196 566 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 CXCL8P10145 99 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 RFC1P35251 1148 aaPredicted RBP13.91□□□□□ -0.18
CASC4-201ENST00000299957 NCALDP61601 193 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 TRIP10Q15642 601 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 CCNG2Q16589 344 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 AGGF1Q8N302 714 aaeCLIP13.91□□□□□ -0.186e-8■■■□□ 17.9
CASC4-201ENST00000299957 CCT6BQ92526 530 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 NIF3L1Q9GZT8 377 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 RANBP17Q9H2T7 1088 aaKnown RBP13.91□□□□□ -0.18
CASC4-201ENST00000299957 RPTORQ8N122 1335 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 ATP6V1B1P15313 513 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 OSBPP22059 807 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 AQP5P55064 265 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 FAAP100Q0VG06 881 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 STX3Q13277 289 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 ART3Q13508 389 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 GMCL1P1Q8NEA9 526 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 SHC3Q92529 594 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 KLK14Q9P0G3 267 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 STRIP2Q9ULQ0 834 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 GOLGA8TH3BQL2 631 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 NPTXRO95502 500 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 MX2P20592 715 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 HMGB2P26583 209 aaKnown RBP13.91□□□□□ -0.18
CASC4-201ENST00000299957 PHKA2P46019 1235 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 TMEM161BQ8NDZ6 487 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 BSNDQ8WZ55 320 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 LENG9Q96B70 501 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 FAM136AQ96C01 138 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 TRIM56Q9BRZ2 755 aaKnown RBP13.91□□□□□ -0.18
CASC4-201ENST00000299957 MECRQ9BV79 373 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 TMEM120AQ9BXJ8 343 aa13.91□□□□□ -0.18
CASC4-201ENST00000299957 CYP3A7-CYP3A51PA0A087WV96 503 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 PIK3CDO00329 1044 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 ENO3P13929 434 aaPredicted RBP13.9□□□□□ -0.18
CASC4-201ENST00000299957 CYP3A7P24462 503 aa13.9□□□□□ -0.18
CASC4-201ENST00000299957 TCF7P36402 384 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms