RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 GABRDO14764 452 aa14.9□□□□□ -0.02
TMEM41B-201ENST00000299596 PRPF40AO75400 957 aaKnown RBP14.9□□□□□ -0.02
TMEM41B-201ENST00000299596 RPL10AP62906 217 aaKnown RBP14.9□□□□□ -0.02
TMEM41B-201ENST00000299596 DNM1Q05193 864 aaKnown RBP14.9□□□□□ -0.02
TMEM41B-201ENST00000299596 PKP1Q13835 747 aa14.9□□□□□ -0.02
TMEM41B-201ENST00000299596 SNRNP35Q16560 246 aaKnown RBP14.9□□□□□ -0.02
TMEM41B-201ENST00000299596 SOWAHAQ2M3V2 549 aa14.9□□□□□ -0.02
TMEM41B-201ENST00000299596 ARHGAP29Q52LW3 1261 aa14.9□□□□□ -0.02
TMEM41B-201ENST00000299596 INTS6LQ5JSJ4 861 aaKnown RBP14.9□□□□□ -0.02
TMEM41B-201ENST00000299596 LMBRD2Q68DH5 695 aaPredicted RBP14.9□□□□□ -0.02
TMEM41B-201ENST00000299596 ADGRF2Q8IZF7 708 aa14.9□□□□□ -0.02
TMEM41B-201ENST00000299596 ADSSL1Q8N142 457 aa14.9□□□□□ -0.02
TMEM41B-201ENST00000299596 XXYLT1Q8NBI6 393 aa14.9□□□□□ -0.02
TMEM41B-201ENST00000299596 RDH13Q8NBN7 331 aa14.9□□□□□ -0.02
TMEM41B-201ENST00000299596 OR5B17Q8NGF7 314 aa14.9□□□□□ -0.02
TMEM41B-201ENST00000299596 PI4K2AQ9BTU6 479 aa14.9□□□□□ -0.02
TMEM41B-201ENST00000299596 BLZF1Q9H2G9 400 aa14.9□□□□□ -0.02
TMEM41B-201ENST00000299596 C8orf33Q9H7E9 229 aaPredicted RBP14.9□□□□□ -0.02
TMEM41B-201ENST00000299596 GTF3C4Q9UKN8 822 aa14.9□□□□□ -0.02
TMEM41B-201ENST00000299596 SOBPA7XYQ1 873 aa14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 SLFN14P0C7P3 912 aa14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 CSH1P0DML2 217 aa14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 CSH2P0DML3 217 aa14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 HMGA1P17096 107 aaKnown RBP14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 ACAT1P24752 427 aaKnown RBP14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 DDX6P26196 483 aaKnown RBP eCLIP14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 AFMP43652 599 aa14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 CUL4BQ13620 913 aa14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 BMT2Q1RMZ1 405 aa14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 SCARA3Q6AZY7 606 aa14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 MAMSTRQ6ZN01 415 aa14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 TRAPPC11Q7Z392 1133 aa14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 LIMS2Q7Z4I7 341 aa14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 GPIHBP1Q8IV16 184 aa14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 NELFCDQ8IXH7 590 aa14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 ZNF687Q8N1G0 1237 aa14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 FUBP3Q96I24 572 aaKnown RBP eCLIP14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 FAM84AQ96KN4 292 aa14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 FNBP1Q96RU3 617 aa14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 IER2Q9BTL4 223 aa14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 SLC46A2Q9BY10 475 aa14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 SLC39A2Q9NP94 309 aa14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 THG1LQ9NWX6 298 aaKnown RBP14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 NDRG2Q9UN36 371 aaKnown RBP14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 NCANO14594 1321 aa14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 PTPRJQ12913 1337 aa14.89□□□□□ -0.03
TMEM41B-201ENST00000299596 TSC2P49815 1807 aa14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 CLIC2O15247 247 aa14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 F11P03951 625 aa14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 DLATP10515 647 aaKnown RBP14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 TNNI1P19237 187 aa14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 CYP2F1P24903 491 aa14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 CASP1P29466 404 aa14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 CYP2J2P51589 502 aa14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 KPNA1P52294 538 aaPredicted RBP14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 NLRP12P59046 1061 aa14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 CYP4F8P98187 520 aa14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 PLCB2Q00722 1185 aa14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 CSTF1Q05048 431 aaKnown RBP14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 PSMD6Q15008 389 aa14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 KNOP1Q1ED39 458 aaKnown RBP14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 CFAP221Q4G0U5 840 aa14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 OSTM1Q86WC4 334 aa14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 SPATA2LQ8IUW3 424 aaPredicted RBP14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 C12orf56Q8IXR9 622 aa14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 CMTM8Q8IZV2 173 aa14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 CELF5Q8N6W0 485 aaKnown RBP14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 BPIFB1Q8TDL5 484 aa14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 LRRC3BQ96PB8 259 aa14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 PKMYT1Q99640 499 aa14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 LMAN1LQ9HAT1 526 aa14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 UXTQ9UBK9 157 aaPredicted RBP14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 PTPRZ1P23471 2315 aaPredicted RBP14.88□□□□□ -0.03
TMEM41B-201ENST00000299596 COL4A3Q01955 1670 aa14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 KINO60870 393 aaKnown RBP14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 FAM163BP0C2L3 166 aa14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 CCNE1P24864 410 aa14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 AVPR1AP37288 418 aa14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 CYP24A1Q07973 514 aa14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 MTAPQ13126 283 aa14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 MAPRE1Q15691 268 aaKnown RBP14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 DDR2Q16832 855 aa14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 FAM171BQ6P995 826 aa14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 C4orf50Q6ZRC1 276 aa14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 TMEM150AQ86TG1 271 aa14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 GOLGA5Q8TBA6 731 aa14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 MRPS31Q92665 395 aaKnown RBP14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 CCDC127Q96BQ5 260 aa14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 CGRRF1Q99675 332 aa14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 CHRDQ9H2X0 955 aa14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 USP25Q9UHP3 1055 aa14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 SERTAD1Q9UHV2 236 aa14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 CDH9Q9ULB4 789 aa14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 MAGED2Q9UNF1 606 aaPredicted RBP14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 PCDHGA2Q9Y5H1 932 aa14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 RIF1Q5UIP0 2472 aaKnown RBP14.87□□□□□ -0.03
TMEM41B-201ENST00000299596 MYBPHLA2RUH7 354 aa14.86□□□□□ -0.03
TMEM41B-201ENST00000299596 PRAMEF12O95522 483 aa14.86□□□□□ -0.03
TMEM41B-201ENST00000299596 CST3P01034 146 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms