RNA–Protein interactions for RNA: ENST00000298694.8

ARHGEF40-201, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ARHGEF40, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-201ENST00000298694 VIPAS39Q9H9C1 493 aa17.23■□□□□ 0.35
ARHGEF40-201ENST00000298694 DPP3Q9NY33 737 aa17.23■□□□□ 0.35
ARHGEF40-201ENST00000298694 MTO1Q9Y2Z2 717 aaKnown RBP17.23■□□□□ 0.35
ARHGEF40-201ENST00000298694 MED14O60244 1454 aa17.23■□□□□ 0.35
ARHGEF40-201ENST00000298694 RRN3P2A6NIE6 340 aa17.23■□□□□ 0.35
ARHGEF40-201ENST00000298694 PRPF39Q86UA1 669 aaKnown RBP17.23■□□□□ 0.35
ARHGEF40-201ENST00000298694 C11orf74Q86VG3 221 aa17.23■□□□□ 0.35
ARHGEF40-201ENST00000298694 BHMTQ93088 406 aa17.23■□□□□ 0.35
ARHGEF40-201ENST00000298694 ARHGAP15Q53QZ3 475 aa17.23■□□□□ 0.35
ARHGEF40-201ENST00000298694 CAPRIN2Q6IMN6 1127 aaKnown RBP17.23■□□□□ 0.35
ARHGEF40-201ENST00000298694 THAP11Q96EK4 314 aa17.23■□□□□ 0.35
ARHGEF40-201ENST00000298694 GID8Q9NWU2 228 aa17.23■□□□□ 0.35
ARHGEF40-201ENST00000298694 PRG3Q9Y2Y8 225 aaPredicted RBP17.23■□□□□ 0.35
ARHGEF40-201ENST00000298694 DTNAQ9Y4J8 743 aa17.23■□□□□ 0.35
ARHGEF40-201ENST00000298694 P4HA2O15460 535 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 ODC1P11926 461 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 PTPN7P35236 360 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 PNPLA4P41247 253 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 LAMC2Q13753 1193 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 POTEAQ6S8J7 498 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 IL17RAQ96F46 866 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 NUDT12Q9BQG2 462 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 ANKEF1Q9NU02 776 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 TBX20Q9UMR3 447 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 ATP11BQ9Y2G3 1177 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 EIF3HO15372 352 aaKnown RBP eCLIP17.22■□□□□ 0.352e-7■■■□□ 17.4
ARHGEF40-201ENST00000298694 FAM107AO95990 144 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 LRG1P02750 347 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 EPB42P16452 691 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 POU4F1Q01851 419 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 CDH18Q13634 790 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 TRIM60Q495X7 471 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 CENPPQ6IPU0 288 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 CNPY4Q8N129 248 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 PDLIM2Q96JY6 352 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 MANSC1Q9H8J5 431 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 MKNK1Q9BUB5 465 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 FOXP3Q9BZS1 431 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 KDM1AO60341 852 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 CENPAP49450 140 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 DDX42Q86XP3 938 aaKnown RBP eCLIP17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 TC2NQ8N9U0 490 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 HES6Q96HZ4 224 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 SEC16BQ96JE7 1060 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 NCALDP61601 193 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 SEZ6Q53EL9 994 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 ATP6V0D2Q8N8Y2 350 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 USP38Q8NB14 1042 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 E2F7Q96AV8 911 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 SYTL2Q9HCH5 934 aa17.22■□□□□ 0.35
ARHGEF40-201ENST00000298694 CLTCL1P53675 1640 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 SMAPO00193 183 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 CSF1RP07333 972 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 EPHB2P29323 1055 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 AVPR1AP37288 418 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 COILP38432 576 aaPredicted RBP17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 SKOR1P84550 965 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 GLRA4Q5JXX5 417 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 OLFML3Q9NRN5 406 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.21■□□□□ 0.357e-7■□□□□ 10.8
ARHGEF40-201ENST00000298694 LZTS1Q9Y250 596 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 DEAF1O75398 565 aaPredicted RBP17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 PGK2P07205 417 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 ORC1Q13415 861 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 DEFB129Q9H1M3 183 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 MTSS1O43312 755 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 GYPCP04921 128 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 BTKQ06187 659 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 SAMD7Q7Z3H4 446 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 ROPN1BQ9BZX4 212 aaPredicted RBP17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 ROPN1Q9HAT0 212 aaPredicted RBP17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 TUBE1Q9UJT0 475 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 B2RBV5 119 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 M0QYT0 321 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 CAND2O75155 1236 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 PMPCBO75439 489 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 S100A5P33763 92 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 GEMIN4P57678 1058 aaKnown RBP17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 CUL2Q13617 745 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 C4orf22Q6V702 233 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 WDCPQ9H6R7 721 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 CAPN10Q9HC96 672 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 WWOXQ9NZC7 414 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 CDY2AQ9Y6F7 541 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 CDY1Q9Y6F8 540 aa17.21■□□□□ 0.35
ARHGEF40-201ENST00000298694 CELF2O95319 508 aaKnown RBP17.2■□□□□ 0.34
ARHGEF40-201ENST00000298694 HIST2H2ACQ16777 129 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF40-201ENST00000298694 HIST2H2AA3Q6FI13 130 aa17.2■□□□□ 0.34
ARHGEF40-201ENST00000298694 DENND5BQ6ZUT9 1274 aa17.2■□□□□ 0.34
ARHGEF40-201ENST00000298694 LINC00523Q86TU6 105 aa17.2■□□□□ 0.34
ARHGEF40-201ENST00000298694 ERP44Q9BS26 406 aa17.2■□□□□ 0.34
ARHGEF40-201ENST00000298694 HNRNPRO43390 633 aaKnown RBP17.2■□□□□ 0.34
ARHGEF40-201ENST00000298694 GUCA1CO95843 209 aa17.2■□□□□ 0.34
ARHGEF40-201ENST00000298694 GSNP06396 782 aa17.2■□□□□ 0.34
ARHGEF40-201ENST00000298694 HUNKP57058 714 aa17.2■□□□□ 0.34
ARHGEF40-201ENST00000298694 RIN2Q8WYP3 895 aaPredicted RBP17.2■□□□□ 0.34
ARHGEF40-201ENST00000298694 SGF29Q96ES7 293 aa17.2■□□□□ 0.34
ARHGEF40-201ENST00000298694 CCDC134Q9H6E4 229 aa17.2■□□□□ 0.34
ARHGEF40-201ENST00000298694 SPASTQ9UBP0 616 aa17.2■□□□□ 0.34
ARHGEF40-201ENST00000298694 BLOC1S6Q9UL45 172 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms