RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 ACSF2Q96CM8 615 aaPredicted RBP27.14■■□□□ 1.94
SDCCAG3-201ENST00000298537 DDX20Q9UHI6 824 aaKnown RBP27.14■■□□□ 1.94
SDCCAG3-201ENST00000298537 MGEA5O60502 916 aa27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 LMO2P25791 158 aa27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 CNGA2Q16280 664 aa27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 CCDC142Q17RM4 750 aa27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 FBXO47Q5MNV8 452 aa27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 IFT20Q8IY31 132 aa27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 LRRC52Q8N7C0 313 aa27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 OR6B3Q8NGW1 331 aa27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 KBTBD7Q8WVZ9 684 aa27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 PIWIL1Q96J94 861 aaKnown RBP27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 NEUROG2Q9H2A3 272 aa27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 MIOSQ9NXC5 875 aa27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 H3BQF6 201 aa27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 PDGFRBP09619 1106 aa27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 MLH1P40692 756 aa27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 SLC1A1P43005 524 aa27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 VEGFBP49765 207 aa27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 PSMC1P62191 440 aaKnown RBP27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 PDCLQ13371 301 aa27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 XYLT1Q86Y38 959 aa27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 C3orf20Q8ND61 904 aa27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 RAET1EQ8TD07 263 aa27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 TRIM31Q9BZY9 425 aa27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 FAM105AQ9NUU6 356 aa27.13■■□□□ 1.93
SDCCAG3-201ENST00000298537 ECHS1P30084 290 aa27.12■■□□□ 1.93
SDCCAG3-201ENST00000298537 RSPH3Q86UC2 560 aa27.12■■□□□ 1.93
SDCCAG3-201ENST00000298537 HEMGNQ9BXL5 484 aa27.12■■□□□ 1.93
SDCCAG3-201ENST00000298537 RGS7P49802 495 aa27.12■■□□□ 1.93
SDCCAG3-201ENST00000298537 ITGA7Q13683 1181 aa27.12■■□□□ 1.93
SDCCAG3-201ENST00000298537 GOLGA7BQ2TAP0 167 aa27.12■■□□□ 1.93
SDCCAG3-201ENST00000298537 MAP9Q49MG5 647 aa27.12■■□□□ 1.93
SDCCAG3-201ENST00000298537 GAD1Q99259 594 aa27.12■■□□□ 1.93
SDCCAG3-201ENST00000298537 KPNA7A9QM74 516 aa27.11■■□□□ 1.93
SDCCAG3-201ENST00000298537 PI4K2BG5E9Z4 385 aa27.11■■□□□ 1.93
SDCCAG3-201ENST00000298537 KCNJ1P48048 391 aa27.11■■□□□ 1.93
SDCCAG3-201ENST00000298537 TTC30AQ86WT1 665 aa27.11■■□□□ 1.93
SDCCAG3-201ENST00000298537 TSEN2Q8NCE0 465 aaKnown RBP27.11■■□□□ 1.93
SDCCAG3-201ENST00000298537 UBXN6Q9BZV1 441 aa27.11■■□□□ 1.93
SDCCAG3-201ENST00000298537 DPH5Q9H2P9 285 aa27.11■■□□□ 1.93
SDCCAG3-201ENST00000298537 SLITRK6Q9H5Y7 841 aa27.11■■□□□ 1.93
SDCCAG3-201ENST00000298537 SYNCQ9H7C4 482 aa27.11■■□□□ 1.93
SDCCAG3-201ENST00000298537 METTL5Q9NRN9 209 aaKnown RBP27.11■■□□□ 1.93
SDCCAG3-201ENST00000298537 CST5P28325 142 aaPredicted RBP27.11■■□□□ 1.93
SDCCAG3-201ENST00000298537 TNFRSF8P28908 595 aa27.11■■□□□ 1.93
SDCCAG3-201ENST00000298537 APLP1P51693 650 aa27.11■■□□□ 1.93
SDCCAG3-201ENST00000298537 ACLYP53396 1101 aa27.11■■□□□ 1.93
SDCCAG3-201ENST00000298537 SMC1AQ14683 1233 aaKnown RBP27.11■■□□□ 1.93
SDCCAG3-201ENST00000298537 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.11■■□□□ 1.93
SDCCAG3-201ENST00000298537 NAP1L3Q99457 506 aaPredicted RBP27.11■■□□□ 1.93
SDCCAG3-201ENST00000298537 FAM118BQ9BPY3 351 aa27.11■■□□□ 1.93
SDCCAG3-201ENST00000298537 IP6K2Q9UHH9 426 aa27.11■■□□□ 1.93
SDCCAG3-201ENST00000298537 PADI3Q9ULW8 664 aa27.11■■□□□ 1.93
SDCCAG3-201ENST00000298537 BHMG1C9JSJ3 638 aaPredicted RBP27.1■■□□□ 1.93
SDCCAG3-201ENST00000298537 DAPK3O43293 454 aa27.1■■□□□ 1.93
SDCCAG3-201ENST00000298537 PPP1R2P3Q6NXS1 205 aa27.1■■□□□ 1.93
SDCCAG3-201ENST00000298537 ARFGAP1Q8N6T3 406 aa27.1■■□□□ 1.93
SDCCAG3-201ENST00000298537 C1orf54Q8WWF1 131 aa27.1■■□□□ 1.93
SDCCAG3-201ENST00000298537 PPP1R10Q96QC0 940 aaKnown RBP27.1■■□□□ 1.93
SDCCAG3-201ENST00000298537 HPCAL4Q9UM19 191 aa27.1■■□□□ 1.93
SDCCAG3-201ENST00000298537 A0A0U1RQG5 324 aaPredicted RBP27.1■■□□□ 1.93
SDCCAG3-201ENST00000298537 LCLAT1Q6UWP7 414 aa27.1■■□□□ 1.93
SDCCAG3-201ENST00000298537 ATG4AQ8WYN0 398 aa27.1■■□□□ 1.93
SDCCAG3-201ENST00000298537 RUBCNQ92622 972 aa27.1■■□□□ 1.93
SDCCAG3-201ENST00000298537 MAGOHBQ96A72 148 aaKnown RBP27.1■■□□□ 1.93
SDCCAG3-201ENST00000298537 RNF25Q96BH1 459 aaPredicted RBP27.1■■□□□ 1.93
SDCCAG3-201ENST00000298537 A8MXQ7 604 aa27.09■■□□□ 1.93
SDCCAG3-201ENST00000298537 CD4P01730 458 aa27.09■■□□□ 1.93
SDCCAG3-201ENST00000298537 KRT3P12035 628 aa27.09■■□□□ 1.93
SDCCAG3-201ENST00000298537 ADCY2Q08462 1091 aa27.09■■□□□ 1.93
SDCCAG3-201ENST00000298537 RHOT1Q8IXI2 618 aa27.09■■□□□ 1.93
SDCCAG3-201ENST00000298537 GOLGA6L10A0A0M3HER8 536 aa27.08■■□□□ 1.93
SDCCAG3-201ENST00000298537 E5RJQ4 531 aa27.08■■□□□ 1.93
SDCCAG3-201ENST00000298537 PHF2O75151 1096 aa27.08■■□□□ 1.93
SDCCAG3-201ENST00000298537 CCDC130P13994 396 aa27.08■■□□□ 1.93
SDCCAG3-201ENST00000298537 LILRA4P59901 499 aa27.08■■□□□ 1.93
SDCCAG3-201ENST00000298537 DR1Q01658 176 aa27.08■■□□□ 1.93
SDCCAG3-201ENST00000298537 RAB6CQ53S08 254 aa27.08■■□□□ 1.93
SDCCAG3-201ENST00000298537 PMF1Q6P1K2 205 aa27.08■■□□□ 1.93
SDCCAG3-201ENST00000298537 CCDC50Q8IVM0 306 aa27.08■■□□□ 1.93
SDCCAG3-201ENST00000298537 RNF169Q8NCN4 708 aa27.08■■□□□ 1.93
SDCCAG3-201ENST00000298537 RAB6CQ9H0N0 254 aa27.08■■□□□ 1.93
SDCCAG3-201ENST00000298537 R3HDM2Q9Y2K5 976 aaKnown RBP27.08■■□□□ 1.93
SDCCAG3-201ENST00000298537 GABBR2O75899 941 aa27.08■■□□□ 1.93
SDCCAG3-201ENST00000298537 INHAP05111 366 aa27.08■■□□□ 1.93
SDCCAG3-201ENST00000298537 RALAP11233 206 aa27.08■■□□□ 1.93
SDCCAG3-201ENST00000298537 PTGIRP43119 386 aa27.08■■□□□ 1.93
SDCCAG3-201ENST00000298537 EPHB4P54760 987 aa27.08■■□□□ 1.93
SDCCAG3-201ENST00000298537 LPIN1Q14693 890 aa27.08■■□□□ 1.93
SDCCAG3-201ENST00000298537 AGMOQ6ZNB7 445 aa27.08■■□□□ 1.93
SDCCAG3-201ENST00000298537 PAAF1Q9BRP4 392 aa27.08■■□□□ 1.93
SDCCAG3-201ENST00000298537 TRPV6Q9H1D0 765 aa27.08■■□□□ 1.93
SDCCAG3-201ENST00000298537 FSCN2O14926 492 aa27.07■■□□□ 1.92
SDCCAG3-201ENST00000298537 TRNP1Q6NT89 227 aa27.07■■□□□ 1.92
SDCCAG3-201ENST00000298537 OSTM1Q86WC4 334 aa27.07■■□□□ 1.92
SDCCAG3-201ENST00000298537 PCSK9Q8NBP7 692 aaKnown RBP27.07■■□□□ 1.92
SDCCAG3-201ENST00000298537 CCDC26Q8TAB7 109 aa27.07■■□□□ 1.92
SDCCAG3-201ENST00000298537 RIN2Q8WYP3 895 aaPredicted RBP27.07■■□□□ 1.92
SDCCAG3-201ENST00000298537 CFHR5Q9BXR6 569 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms