RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 POLBP06746 335 aa17.17■□□□□ 0.34
SNAPC4-201ENST00000298532 MYL3P08590 195 aa17.17■□□□□ 0.34
SNAPC4-201ENST00000298532 HLA-DPA1P20036 260 aa17.17■□□□□ 0.34
SNAPC4-201ENST00000298532 PTENP60484 403 aa17.17■□□□□ 0.34
SNAPC4-201ENST00000298532 RBBP7Q16576 425 aa17.17■□□□□ 0.34
SNAPC4-201ENST00000298532 ATP8B4Q8TF62 1192 aa17.17■□□□□ 0.34
SNAPC4-201ENST00000298532 JADE3Q92613 823 aa17.17■□□□□ 0.34
SNAPC4-201ENST00000298532 CNDP1Q96KN2 507 aa17.17■□□□□ 0.34
SNAPC4-201ENST00000298532 SARS2Q9NP81 518 aaKnown RBP17.17■□□□□ 0.34
SNAPC4-201ENST00000298532 DGKIO75912 1065 aa17.17■□□□□ 0.34
SNAPC4-201ENST00000298532 WDR47O94967 919 aa17.17■□□□□ 0.34
SNAPC4-201ENST00000298532 PSMC3P17980 439 aa17.17■□□□□ 0.34
SNAPC4-201ENST00000298532 ZKSCAN4Q969J2 545 aaPredicted RBP17.17■□□□□ 0.34
SNAPC4-201ENST00000298532 KLHL4Q9C0H6 718 aa17.17■□□□□ 0.34
SNAPC4-201ENST00000298532 UBA6A0AVT1 1052 aaPredicted RBP17.17■□□□□ 0.34
SNAPC4-201ENST00000298532 ADORA2BP29275 332 aa17.17■□□□□ 0.34
SNAPC4-201ENST00000298532 STX5Q13190 355 aa17.17■□□□□ 0.34
SNAPC4-201ENST00000298532 PARD3BQ8TEW8 1205 aa17.17■□□□□ 0.34
SNAPC4-201ENST00000298532 MTMR8Q96EF0 704 aa17.17■□□□□ 0.34
SNAPC4-201ENST00000298532 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.17■□□□□ 0.34
SNAPC4-201ENST00000298532 TAGLN3Q9UI15 199 aa17.17■□□□□ 0.34
SNAPC4-201ENST00000298532 CES2O00748 559 aa17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 GRB10Q13322 594 aa17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 MTM1Q13496 603 aa17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 CCDC85BQ15834 202 aaPredicted RBP17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 HDAC7Q8WUI4 952 aa17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 AGAP3Q96P47 875 aa17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 FAM49AQ9H0Q0 323 aaPredicted RBP17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 CHORDC1Q9UHD1 332 aaPredicted RBP17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 SLC24A2Q9UI40 661 aa17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 TRAPPC3O43617 180 aa17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 THRAP10827 490 aa17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 STIP1P31948 543 aaKnown RBP17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 MRPL28Q13084 256 aaKnown RBP17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 NT5DC1Q5TFE4 455 aa17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 TMC3Q7Z5M5 1100 aa17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 SGSM1Q2NKQ1 1148 aa17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 SCFD1Q8WVM8 642 aa17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 ATG4AQ8WYN0 398 aa17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 SEMA4AQ9H3S1 761 aa17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 SEMA6BQ9H3T3 888 aa17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 RPAP3Q9H6T3 665 aaPredicted RBP17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 CELF2O95319 508 aaKnown RBP17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 PREPLQ4J6C6 727 aaPredicted RBP17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 C6orf10Q5SRN2 563 aa17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 ZNF786Q8N393 782 aa17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 EPAS1Q99814 870 aa17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 AGXT2Q9BYV1 514 aa17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 FRMD8P1Q9BZ68 369 aaPredicted RBP17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 GDF3Q9NR23 364 aa17.16■□□□□ 0.34
SNAPC4-201ENST00000298532 HLA-DRAP01903 254 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 ALBP02768 609 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 SARSP49591 514 aaKnown RBP17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 ACOT2P49753 483 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 CLK1P49759 484 aaKnown RBP17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 GTF2A2P52657 109 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 DMC1Q14565 340 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 RASA2Q15283 850 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 SNX30Q5VWJ9 437 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 FAM71DQ8N9W8 422 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 PTPRN2Q92932 1015 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 NMD3Q96D46 503 aaKnown RBP17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 TEX13BQ9BXU2 312 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 SHCBP1LQ9BZQ2 653 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 SRRM3A6NNA2 597 aaPredicted RBP17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 SLC34A1Q06495 639 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 LZICQ8WZA0 190 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 ZNF212Q9UDV6 495 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 ZSCAN5CA6NGD5 496 aaPredicted RBP17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 FOXN3O00409 490 aaPredicted RBP17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 FAM153BP0C7A2 387 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 HSD17B4P51659 736 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 PDIA6Q15084 440 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 KYAT1Q16773 422 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 FAM153CQ494X1 144 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 TRIM60Q495X7 471 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 CDC42EP5Q6NZY7 148 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 LDHDQ86WU2 507 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 C1orf131Q8NDD1 294 aaKnown RBP17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 INPP5DQ92835 1189 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 TMEM120AQ9BXJ8 343 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 SCN3BQ9NY72 215 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 FAM153AQ9UHL3 310 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 TRPC5OSA6NMA1 111 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 GLRA3O75311 464 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 ARPP19P56211 112 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 TPI1P60174 286 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 ERVK-9P63128 1117 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 KBTBD12Q3ZCT8 623 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 EFHC1Q5JVL4 640 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 SMIM5Q71RC9 77 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 PPP2R3CQ969Q6 453 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 TLR10Q9BXR5 811 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 ILKAPQ9H0C8 392 aaPredicted RBP17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 SP110Q9HB58 689 aa17.15■□□□□ 0.34
SNAPC4-201ENST00000298532 EPHX2P34913 555 aa17.14■□□□□ 0.34
SNAPC4-201ENST00000298532 HMGCS2P54868 508 aa17.14■□□□□ 0.34
SNAPC4-201ENST00000298532 PGM2Q96G03 612 aa17.14■□□□□ 0.34
SNAPC4-201ENST00000298532 DEFB129Q9H1M3 183 aa17.14■□□□□ 0.34
SNAPC4-201ENST00000298532 AGPAT3Q9NRZ7 376 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms