RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 FGF18O76093 207 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 HLA-DRAP01903 254 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 TNNI1P19237 187 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 RPL9P32969 192 aaKnown RBP6.35□□□□□ -1.39
SSX3-201ENST00000298396 IRS1P35568 1242 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 SCNN1AP37088 669 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 OR1G1P47890 313 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 FMO5P49326 533 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 ZNF165P49910 485 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 LILRA4P59901 499 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 ERVFC1P60507 584 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 MYL6P60660 151 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 PLCB3Q01970 1234 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 APBA1Q02410 837 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 ADGRE1Q14246 886 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 KCNJ12Q14500 433 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 GRIN2CQ14957 1233 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 KRT31Q15323 416 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 SURF1Q15526 300 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 DUOXA2Q1HG44 320 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 CCDC40Q4G0X9 1142 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 TIGD5Q53EQ6 642 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 TCP11X2Q5H9J9 407 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 COX20Q5RI15 118 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 SPOPLQ6IQ16 392 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 C16orf46Q6P387 395 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 NT5DC4Q86YG4 428 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 BEST2Q8NFU1 509 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 AUTS2Q8WXX7 1259 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 ARNTL2Q8WYA1 636 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 RSPH1Q8WYR4 309 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 GUCD1Q96NT3 240 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 FAM193BQ96PV7 902 aaPredicted RBP6.35□□□□□ -1.39
SSX3-201ENST00000298396 FNBP1Q96RU3 617 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 TSPAN18Q96SJ8 248 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 PI4K2AQ9BTU6 479 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 PLVAPQ9BX97 442 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 ZBP1Q9H171 429 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 TSPY26PQ9H489 355 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 ZNF576Q9H609 170 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 TMEM8AQ9HCN3 771 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 NDFIP2Q9NV92 336 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 SLC38A7Q9NVC3 462 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 SPG21Q9NZD8 308 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 NXF1Q9UBU9 619 aaKnown RBP6.35□□□□□ -1.39
SSX3-201ENST00000298396 SEPT3Q9UH03 358 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 ARMCX3Q9UH62 379 aaPredicted RBP6.35□□□□□ -1.39
SSX3-201ENST00000298396 ADAM28Q9UKQ2 775 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 ITGA11Q9UKX5 1188 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 ZNF232Q9UNY5 417 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 AGAP1Q9UPQ3 857 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 FAN1Q9Y2M0 1017 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 COQ4Q9Y3A0 265 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 HELZP42694 1942 aaKnown RBP6.35□□□□□ -1.39
SSX3-201ENST00000298396 MYO10Q9HD67 2058 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 TMEM265A0A087WTH1 108 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 HIDE1A8MVS5 230 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 PMM2O15305 246 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 ADAM12O43184 909 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 AP5Z1O43299 807 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 GNA14O95837 355 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 ASS1P00966 412 aaKnown RBP6.34□□□□□ -1.39
SSX3-201ENST00000298396 TNNC2P02585 160 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 ALDH2P05091 517 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 RB1P06400 928 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 TMEM191BP0C7N4 346 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 KRT13P13646 458 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 FGFR3P22607 806 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 TKTP29401 623 aaKnown RBP6.34□□□□□ -1.39
SSX3-201ENST00000298396 GTF2H1P32780 548 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 ALDH7A1P49419 539 aaKnown RBP6.34□□□□□ -1.39
SSX3-201ENST00000298396 MXI1P50539 228 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 GPM6BQ13491 265 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 HIF1AQ16665 826 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 PTPN21Q16825 1174 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 CCDC142Q17RM4 750 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 DCAF17Q5H9S7 520 aaPredicted RBP6.34□□□□□ -1.39
SSX3-201ENST00000298396 RTP2Q5QGT7 225 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 SPOUT1Q5T280 376 aaKnown RBP6.34□□□□□ -1.39
SSX3-201ENST00000298396 KIAA0319Q5VV43 1072 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 TCERG1LQ5VWI1 586 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 FUT10Q6P4F1 479 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 DCLRE1AQ6PJP8 1040 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 RSPO2Q6UXX9 243 aaPredicted RBP6.34□□□□□ -1.39
SSX3-201ENST00000298396 DDX53Q86TM3 631 aaKnown RBP6.34□□□□□ -1.39
SSX3-201ENST00000298396 OSTM1Q86WC4 334 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 FEZF2Q8TBJ5 459 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 CACTINQ8WUQ7 758 aaKnown RBP6.34□□□□□ -1.39
SSX3-201ENST00000298396 KBTBD7Q8WVZ9 684 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 ZNF837Q96EG3 531 aaPredicted RBP6.34□□□□□ -1.39
SSX3-201ENST00000298396 ANKRD36BP1Q96IX9 119 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 SUSD3Q96L08 255 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 FAM161BQ96MY7 647 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 UROC1Q96N76 676 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 RTP3Q9BQQ7 232 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 HERC2P3Q9BVR0 1158 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 SAP130Q9H0E3 1048 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 SDCBP2Q9H190 292 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 RBSNQ9H1K0 784 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 PRDM12Q9H4Q4 367 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms