RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 TRPV5Q9NQA5 729 aa17.59■□□□□ 0.41
NPM1-201ENST00000296930 EXOC1Q9NV70 894 aa17.59■□□□□ 0.41
NPM1-201ENST00000296930 MTF2Q9Y483 593 aaPredicted RBP17.59■□□□□ 0.41
NPM1-201ENST00000296930 PATJQ8NI35 1801 aa17.59■□□□□ 0.41
NPM1-201ENST00000296930 TICRRQ7Z2Z1 1910 aa17.59■□□□□ 0.41
NPM1-201ENST00000296930 GOLGA8IPA6NC78 632 aa17.58■□□□□ 0.41
NPM1-201ENST00000296930 GOLGA8JA6NMD2 632 aa17.58■□□□□ 0.41
NPM1-201ENST00000296930 NCAM2O15394 837 aa17.58■□□□□ 0.41
NPM1-201ENST00000296930 ITGB3P05106 788 aa17.58■□□□□ 0.41
NPM1-201ENST00000296930 POLR2BP30876 1174 aaKnown RBP17.58■□□□□ 0.41
NPM1-201ENST00000296930 VIPR2P41587 438 aa17.58■□□□□ 0.41
NPM1-201ENST00000296930 VEPH1Q14D04 833 aa17.58■□□□□ 0.41
NPM1-201ENST00000296930 MGAT5BQ3V5L5 792 aa17.58■□□□□ 0.41
NPM1-201ENST00000296930 MFSD6LQ8IWD5 586 aa17.58■□□□□ 0.41
NPM1-201ENST00000296930 DCP1BQ8IZD4 617 aaKnown RBP17.58■□□□□ 0.41
NPM1-201ENST00000296930 GPD1LQ8N335 351 aa17.58■□□□□ 0.41
NPM1-201ENST00000296930 C1orf127Q8N9H9 656 aa17.58■□□□□ 0.41
NPM1-201ENST00000296930 MLKLQ8NB16 471 aa17.58■□□□□ 0.41
NPM1-201ENST00000296930 NOC3LQ8WTT2 800 aaKnown RBP17.58■□□□□ 0.41
NPM1-201ENST00000296930 SEPT5Q99719 369 aaPredicted RBP17.58■□□□□ 0.41
NPM1-201ENST00000296930 PCIF1Q9H4Z3 704 aa17.58■□□□□ 0.41
NPM1-201ENST00000296930 ITGA11Q9UKX5 1188 aa17.58■□□□□ 0.41
NPM1-201ENST00000296930 AGAP1Q9UPQ3 857 aa17.58■□□□□ 0.41
NPM1-201ENST00000296930 DMDP11532 3685 aa17.58■□□□□ 0.41
NPM1-201ENST00000296930 WDR87Q6ZQQ6 2873 aa17.58■□□□□ 0.4
NPM1-201ENST00000296930 NUP210Q8TEM1 1887 aaPredicted RBP17.58■□□□□ 0.4
NPM1-201ENST00000296930 SOAT2O75908 522 aa17.58■□□□□ 0.4
NPM1-201ENST00000296930 CD44P16070 742 aaKnown RBP17.58■□□□□ 0.4
NPM1-201ENST00000296930 GDI1P31150 447 aa17.58■□□□□ 0.4
NPM1-201ENST00000296930 LRRC52Q8N7C0 313 aa17.58■□□□□ 0.4
NPM1-201ENST00000296930 CCDC47Q96A33 483 aaKnown RBP17.58■□□□□ 0.4
NPM1-201ENST00000296930 GRPEL1Q9HAV7 217 aa17.58■□□□□ 0.4
NPM1-201ENST00000296930 ZNF334Q9HCZ1 680 aaPredicted RBP17.58■□□□□ 0.4
NPM1-201ENST00000296930 COL4A2P08572 1712 aa17.57■□□□□ 0.4
NPM1-201ENST00000296930 HEPACAM2A8MVW5 462 aa17.57■□□□□ 0.4
NPM1-201ENST00000296930 MAN2B1O00754 1011 aa17.57■□□□□ 0.4
NPM1-201ENST00000296930 EIF3DO15371 548 aaKnown RBP eCLIP17.57■□□□□ 0.48e-12■□□□□ 8.6
NPM1-201ENST00000296930 SP9P0CG40 484 aa17.57■□□□□ 0.4
NPM1-201ENST00000296930 IQCB1Q15051 598 aa17.57■□□□□ 0.4
NPM1-201ENST00000296930 ARHGAP15Q53QZ3 475 aa17.57■□□□□ 0.4
NPM1-201ENST00000296930 ZC3H14Q6PJT7 736 aaKnown RBP17.57■□□□□ 0.4
NPM1-201ENST00000296930 GAREM2Q75VX8 874 aa17.57■□□□□ 0.4
NPM1-201ENST00000296930 LRRTM3Q86VH5 581 aa17.57■□□□□ 0.4
NPM1-201ENST00000296930 CSGALNACT2Q8N6G5 542 aa17.57■□□□□ 0.4
NPM1-201ENST00000296930 HPS3Q969F9 1004 aa17.57■□□□□ 0.4
NPM1-201ENST00000296930 CLDN23Q96B33 292 aa17.57■□□□□ 0.4
NPM1-201ENST00000296930 BPIFA3Q9BQP9 254 aa17.57■□□□□ 0.4
NPM1-201ENST00000296930 ATXN3LQ9H3M9 355 aa17.57■□□□□ 0.4
NPM1-201ENST00000296930 PDE11AQ9HCR9 933 aa17.57■□□□□ 0.4
NPM1-201ENST00000296930 SPATA6Q9NWH7 488 aaPredicted RBP17.57■□□□□ 0.4
NPM1-201ENST00000296930 PPP1R3GB7ZBB8 358 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 ZNF263O14978 683 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 HUS1O60921 280 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 TMEM191BP0C7N4 346 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 TARSP26639 723 aaKnown RBP17.56■□□□□ 0.4
NPM1-201ENST00000296930 GABRR2P28476 465 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 RPS9P46781 194 aaKnown RBP17.56■□□□□ 0.4
NPM1-201ENST00000296930 RBP5P82980 135 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 TSPY1Q01534 308 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 STK4Q13043 487 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 LUZP1Q86V48 1076 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 TMEM86AQ8N2M4 240 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 KIAA0895Q8NCT3 520 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 LPIN3Q9BQK8 851 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 NAT10Q9H0A0 1025 aaKnown RBP17.56■□□□□ 0.4
NPM1-201ENST00000296930 ABI2Q9NYB9 513 aaPredicted RBP17.56■□□□□ 0.4
NPM1-201ENST00000296930 DENND4CQ5VZ89 1909 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 ZNF233A6NK53 670 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 LAMTOR5O43504 91 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 KRT19P08727 400 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 HAPLN1P10915 354 aaPredicted RBP17.56■□□□□ 0.4
NPM1-201ENST00000296930 ATF6P18850 670 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 BFSP1Q12934 665 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 SURF1Q15526 300 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 TAF12Q16514 161 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 NFE2Q16621 373 aaPredicted RBP17.56■□□□□ 0.4
NPM1-201ENST00000296930 ARID3BQ8IVW6 561 aaPredicted RBP17.56■□□□□ 0.4
NPM1-201ENST00000296930 DHX40Q8IX18 779 aaKnown RBP17.56■□□□□ 0.4
NPM1-201ENST00000296930 YAF2Q8IY57 180 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 PDCL2Q8N4E4 241 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 GLIS3Q8NEA6 775 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 CXorf38Q8TB03 319 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 SPATA18Q8TC71 538 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 ANKRD36BP1Q96IX9 119 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 KIAA1586Q9HCI6 787 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 GDAP2Q9NXN4 497 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 DACH1Q9UI36 760 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 L1RE1Q9UN81 338 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 R3HCC1Q9Y3T6 440 aaKnown RBP17.56■□□□□ 0.4
NPM1-201ENST00000296930 PCDHB5Q9Y5E4 795 aa17.56■□□□□ 0.4
NPM1-201ENST00000296930 GVINP1Q7Z2Y8 2422 aa17.55■□□□□ 0.4
NPM1-201ENST00000296930 SHISA7A6NL88 538 aa17.55■□□□□ 0.4
NPM1-201ENST00000296930 CDC25CP30307 473 aa17.55■□□□□ 0.4
NPM1-201ENST00000296930 PRCPP42785 496 aa17.55■□□□□ 0.4
NPM1-201ENST00000296930 ZNF528Q3MIS6 628 aa17.55■□□□□ 0.4
NPM1-201ENST00000296930 FAM26FQ5R3K3 315 aa17.55■□□□□ 0.4
NPM1-201ENST00000296930 STXBP5Q5T5C0 1151 aa17.55■□□□□ 0.4
NPM1-201ENST00000296930 GPR158Q5T848 1215 aa17.55■□□□□ 0.4
NPM1-201ENST00000296930 MAML2Q8IZL2 1156 aaPredicted RBP17.55■□□□□ 0.4
NPM1-201ENST00000296930 ZNF507Q8TCN5 953 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms