RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 TTMPQ5BVD1 217 aa9.79□□□□□ -0.84
CLRN1-201ENST00000295911 AGBL2Q5U5Z8 902 aa9.79□□□□□ -0.84
CLRN1-201ENST00000295911 JADE1Q6IE81 842 aa9.79□□□□□ -0.84
CLRN1-201ENST00000295911 TTC27Q6P3X3 843 aa9.79□□□□□ -0.84
CLRN1-201ENST00000295911 DCUN1D2Q6PH85 259 aa9.79□□□□□ -0.84
CLRN1-201ENST00000295911 CPNE8Q86YQ8 564 aa9.79□□□□□ -0.84
CLRN1-201ENST00000295911 CCDC50Q8IVM0 306 aa9.79□□□□□ -0.84
CLRN1-201ENST00000295911 KIAA0319LQ8IZA0 1049 aa9.79□□□□□ -0.84
CLRN1-201ENST00000295911 ZDHHC14Q8IZN3 488 aa9.79□□□□□ -0.84
CLRN1-201ENST00000295911 NIPA2Q8N8Q9 360 aa9.79□□□□□ -0.84
CLRN1-201ENST00000295911 CEP120Q8N960 986 aa9.79□□□□□ -0.84
CLRN1-201ENST00000295911 C1orf127Q8N9H9 656 aa9.79□□□□□ -0.84
CLRN1-201ENST00000295911 BBOF1Q8ND07 529 aa9.79□□□□□ -0.84
CLRN1-201ENST00000295911 C3orf20Q8ND61 904 aa9.79□□□□□ -0.84
CLRN1-201ENST00000295911 ART4Q93070 314 aa9.79□□□□□ -0.84
CLRN1-201ENST00000295911 ARL8AQ96BM9 186 aa9.79□□□□□ -0.84
CLRN1-201ENST00000295911 ZNF668Q96K58 619 aaPredicted RBP9.79□□□□□ -0.84
CLRN1-201ENST00000295911 GCOM2Q9BZD3 368 aaPredicted RBP9.79□□□□□ -0.84
CLRN1-201ENST00000295911 TRIM7Q9C029 511 aa9.79□□□□□ -0.84
CLRN1-201ENST00000295911 MIS12Q9H081 205 aa9.79□□□□□ -0.84
CLRN1-201ENST00000295911 SIX4Q9UIU6 781 aa9.79□□□□□ -0.84
CLRN1-201ENST00000295911 ZHX1Q9UKY1 873 aaPredicted RBP9.79□□□□□ -0.84
CLRN1-201ENST00000295911 NFS1Q9Y697 457 aa9.79□□□□□ -0.84
CLRN1-201ENST00000295911 TRIP12Q14669 1992 aaPredicted RBP9.78□□□□□ -0.84
CLRN1-201ENST00000295911 NRCAMQ92823 1304 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 TCRBV5S1A1TA0A578 114 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 TCRBV7S2A1N4TA0A589 114 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 ERICH4A6NGS2 130 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 A6NJR5 290 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 SIGLEC16A6NMB1 481 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 TJP3O95049 919 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 ITGB3P05106 788 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 VDRP11473 427 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 CD19P15391 556 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 AXLP30530 894 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 FLT3P36888 993 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 RPL21P46778 160 aaKnown RBP9.78□□□□□ -0.84
CLRN1-201ENST00000295911 RAD23BP54727 409 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 PLTPP55058 493 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 IFFO1Q0D2I5 559 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 PTK6Q13882 451 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 ZNF268Q14587 947 aaPredicted RBP9.78□□□□□ -0.84
CLRN1-201ENST00000295911 ACAP1Q15027 740 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 STILQ15468 1287 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 ZSCAN26Q16670 478 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 ZNF394Q53GI3 561 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 MARCH8Q5T0T0 291 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 ZDHHC24Q6UX98 284 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 SCARA5Q6ZMJ2 495 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 KDM7AQ6ZMT4 941 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 CEP128Q6ZU80 1094 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 PHLDB2Q86SQ0 1253 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 HOOK3Q86VS8 718 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 CDR2LQ86X02 465 aaPredicted RBP9.78□□□□□ -0.84
CLRN1-201ENST00000295911 TMEM192Q8IY95 271 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 WDTC1Q8N5D0 677 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 NPLOC4Q8TAT6 608 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 FNIP1Q8TF40 1166 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 TFAP2BQ92481 460 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 ZBTB9Q96C00 473 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 ZBTB10Q96DT7 871 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 TMEM176AQ96HP8 235 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 HPDLQ96IR7 371 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 CPB2Q96IY4 423 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 TSPAN18Q96SJ8 248 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 CAPS2Q9BXY5 557 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 OSBPL8Q9BZF1 889 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 DCLK3Q9C098 648 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 ZMYND15Q9H091 742 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 PABPC3Q9H361 631 aaKnown RBP9.78□□□□□ -0.84
CLRN1-201ENST00000295911 DPP3Q9NY33 737 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 GRHL1Q9NZI5 618 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 POLIQ9UNA4 740 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 USTQ9Y2C2 406 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 Q9Y3F1 56 aa9.78□□□□□ -0.84
CLRN1-201ENST00000295911 SMIM35A0A1B0GVV1 85 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 NDC80O14777 642 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 CILPO75339 1184 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 HMGCRP04035 888 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 NUDT17P0C025 328 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 RALAP11233 206 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 SSTR3P32745 418 aaPredicted RBP9.77□□□□□ -0.85
CLRN1-201ENST00000295911 PTPN7P35236 360 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 CDR1P51861 262 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 TAS2R40P59535 323 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 KRT17Q04695 432 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 PTPN11Q06124 597 aaPredicted RBP9.77□□□□□ -0.85
CLRN1-201ENST00000295911 ZNF844Q08AG5 666 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 MYO1EQ12965 1108 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 KLF1Q13351 362 aaPredicted RBP9.77□□□□□ -0.85
CLRN1-201ENST00000295911 CNGA2Q16280 664 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 C2CD6Q53TS8 623 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 MORN1Q5T089 497 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 DENND2CQ68D51 928 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 SCARA3Q6AZY7 606 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 SLC27A1Q6PCB7 646 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 ILDR2Q71H61 639 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 POLNQ7Z5Q5 900 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 CXorf38Q8TB03 319 aa9.77□□□□□ -0.85
CLRN1-201ENST00000295911 FBXO25Q8TCJ0 367 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms