RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 OVOS1Q6IE37 1185 aa10.07□□□□□ -0.8
CNOT9-202ENST00000295701 PKN3Q6P5Z2 889 aa10.07□□□□□ -0.8
CNOT9-202ENST00000295701 USP37Q86T82 979 aa10.07□□□□□ -0.8
CNOT9-202ENST00000295701 SPEM1Q8N4L4 309 aa10.07□□□□□ -0.8
CNOT9-202ENST00000295701 CELF5Q8N6W0 485 aaKnown RBP10.07□□□□□ -0.8
CNOT9-202ENST00000295701 LEMD2Q8NC56 503 aa10.07□□□□□ -0.8
CNOT9-202ENST00000295701 GIPC2Q8TF65 315 aa10.07□□□□□ -0.8
CNOT9-202ENST00000295701 SENP8Q96LD8 212 aa10.07□□□□□ -0.8
CNOT9-202ENST00000295701 REEP2Q9BRK0 252 aa10.07□□□□□ -0.8
CNOT9-202ENST00000295701 TIPINQ9BVW5 301 aa10.07□□□□□ -0.8
CNOT9-202ENST00000295701 IKZF4Q9H2S9 585 aa10.07□□□□□ -0.8
CNOT9-202ENST00000295701 RPF1Q9H9Y2 349 aaKnown RBP10.07□□□□□ -0.8
CNOT9-202ENST00000295701 SH2B1Q9NRF2 756 aaPredicted RBP10.07□□□□□ -0.8
CNOT9-202ENST00000295701 POLR3BQ9NW08 1133 aaPredicted RBP10.07□□□□□ -0.8
CNOT9-202ENST00000295701 MAFFQ9ULX9 164 aa10.07□□□□□ -0.8
CNOT9-202ENST00000295701 TBX20Q9UMR3 447 aa10.07□□□□□ -0.8
CNOT9-202ENST00000295701 GREB1Q4ZG55 1949 aa10.07□□□□□ -0.8
CNOT9-202ENST00000295701 EPG5Q9HCE0 2579 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.06□□□□□ -0.8
CNOT9-202ENST00000295701 MYBPHLA2RUH7 354 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 OR6C75A6NL08 312 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 OGTO15294 1046 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 ADRB2P07550 413 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 NFICP08651 508 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 NMT1P30419 496 aaKnown RBP10.06□□□□□ -0.8
CNOT9-202ENST00000295701 PXNP49023 591 aaPredicted RBP10.06□□□□□ -0.8
CNOT9-202ENST00000295701 ACOT2P49753 483 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 LIG4P49917 911 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 GRIN1Q05586 938 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 MCM6Q14566 821 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 CCDC6Q16204 474 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 QPCTQ16769 361 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 TUSC1Q2TAM9 212 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 C9orf57Q5W0N0 161 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 SCARA3Q6AZY7 606 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 LAIR1Q6GTX8 287 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 LRRTM3Q86VH5 581 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 GPBP1Q86WP2 473 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 MYCT1Q8N699 235 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 STKLD1Q8NE28 680 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 PSMG2Q969U7 264 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 RTKNQ9BST9 563 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 GPR88Q9GZN0 384 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 C8orf33Q9H7E9 229 aaPredicted RBP10.06□□□□□ -0.8
CNOT9-202ENST00000295701 SEMA4GQ9NTN9 838 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 BLOC1S4Q9NUP1 217 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 MAP10Q9P2G4 905 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 ABCA7Q8IZY2 2146 aa10.06□□□□□ -0.8
CNOT9-202ENST00000295701 LAMA1P25391 3075 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 ANAPC1Q9H1A4 1944 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 A0A0B4J269 797 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 K7ENM7 598 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 PIRO00625 290 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 HNRNPDLO14979 420 aaKnown RBP10.05□□□□□ -0.8
CNOT9-202ENST00000295701 EXTL3O43909 919 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 F12P00748 615 aaPredicted RBP10.05□□□□□ -0.8
CNOT9-202ENST00000295701 PIGRP01833 764 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 RETP07949 1114 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 ATF6P18850 670 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 TYMPP19971 482 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 SDHBP21912 280 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 VARSP26640 1264 aaKnown RBP10.05□□□□□ -0.8
CNOT9-202ENST00000295701 PLD1Q13393 1074 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 MYBPC2Q14324 1141 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 MGAT5BQ3V5L5 792 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 SLC39A12Q504Y0 691 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 ZC2HC1CQ53FD0 456 aaPredicted RBP10.05□□□□□ -0.8
CNOT9-202ENST00000295701 ARMCX5Q6P1M9 558 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 RIN3Q8TB24 985 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 FAM200AQ8TCP9 573 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 TSC1Q92574 1164 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 E2F7Q96AV8 911 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 CDK5RAP3Q96JB5 506 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 FIZ1Q96SL8 496 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 SEPT5Q99719 369 aaPredicted RBP10.05□□□□□ -0.8
CNOT9-202ENST00000295701 IER2Q9BTL4 223 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 MSTO1Q9BUK6 570 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 SLC46A2Q9BY10 475 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 ZHX3Q9H4I2 956 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 GKN1Q9NS71 199 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 LARSQ9P2J5 1176 aaKnown RBP10.05□□□□□ -0.8
CNOT9-202ENST00000295701 CPSF3Q9UKF6 684 aaKnown RBP10.05□□□□□ -0.8
CNOT9-202ENST00000295701 MYOFQ9NZM1 2061 aa10.05□□□□□ -0.8
CNOT9-202ENST00000295701 MYO16Q9Y6X6 1858 aa10.04□□□□□ -0.8
CNOT9-202ENST00000295701 ANO9A1A5B4 782 aa10.04□□□□□ -0.8
CNOT9-202ENST00000295701 OTOL1A6NHN0 477 aaPredicted RBP10.04□□□□□ -0.8
CNOT9-202ENST00000295701 CYB561D2O14569 222 aa10.04□□□□□ -0.8
CNOT9-202ENST00000295701 SLC30A4O14863 429 aa10.04□□□□□ -0.8
CNOT9-202ENST00000295701 FAM13AO94988 1023 aa10.04□□□□□ -0.8
CNOT9-202ENST00000295701 CYP11A1P05108 521 aa10.04□□□□□ -0.8
CNOT9-202ENST00000295701 ADRB1P08588 477 aa10.04□□□□□ -0.8
CNOT9-202ENST00000295701 ODC1P11926 461 aa10.04□□□□□ -0.8
CNOT9-202ENST00000295701 PLCG1P19174 1290 aa10.04□□□□□ -0.8
CNOT9-202ENST00000295701 GPR15P49685 360 aa10.04□□□□□ -0.8
CNOT9-202ENST00000295701 MLLT6P55198 1093 aaPredicted RBP10.04□□□□□ -0.8
CNOT9-202ENST00000295701 CCINQ13939 588 aa10.04□□□□□ -0.8
CNOT9-202ENST00000295701 LRRC32Q14392 662 aa10.04□□□□□ -0.8
CNOT9-202ENST00000295701 PPP2R5DQ14738 602 aa10.04□□□□□ -0.8
CNOT9-202ENST00000295701 SF3A2Q15428 464 aaKnown RBP10.04□□□□□ -0.8
CNOT9-202ENST00000295701 ARHGAP29Q52LW3 1261 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms