RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 TUT1Q9H6E5 874 aaKnown RBP10.67□□□□□ -0.7
CLDN1-201ENST00000295522 ARMC7Q9H6L4 198 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 NDUFA13Q9P0J0 144 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 CIDEBQ9UHD4 219 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 DUOX1Q9NRD9 1551 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 UBAP1LF5GYI3 381 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 STRNO43815 780 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 FGRP09769 529 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 CDK8P49336 464 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 SLC12A3P55017 1021 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 GAD2Q05329 585 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 GK3PQ14409 553 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 CHI3L2Q15782 390 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 HIF1AQ16665 826 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 PPP6R3Q5H9R7 873 aaPredicted RBP10.67□□□□□ -0.7
CLDN1-201ENST00000295522 C6orf183Q5T699 404 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 PPP1R2P3Q6NXS1 205 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 C3orf67Q6ZVT6 689 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 RNF148Q8N7C7 305 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 BRD8Q9H0E9 1235 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 STK32BQ9NY57 414 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 DNPEPQ9ULA0 475 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 NENFQ9UMX5 172 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 E5RJQ4 531 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 FSCN2O14926 492 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 SLC16A3O15427 465 aaKnown RBP10.67□□□□□ -0.7
CLDN1-201ENST00000295522 TGFB1I1O43294 461 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 ADCY6O43306 1168 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 ZNF24P17028 368 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 BASP1P80723 227 aaKnown RBP10.67□□□□□ -0.7
CLDN1-201ENST00000295522 MYLK3Q32MK0 819 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 ATP13A4Q4VNC1 1196 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 MAP3K21Q5TCX8 1036 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 ITPRIPL1Q6GPH6 555 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 SLF2Q8IX21 1173 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 FAM163AQ96GL9 167 aaPredicted RBP10.67□□□□□ -0.7
CLDN1-201ENST00000295522 FAM84AQ96KN4 292 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 FAM81BQ96LP2 452 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 CCT7Q99832 543 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 TMEM121Q9BTD3 319 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 PCDH18Q9HCL0 1135 aa10.67□□□□□ -0.7
CLDN1-201ENST00000295522 DDX43Q9NXZ2 648 aaKnown RBP10.67□□□□□ -0.7
CLDN1-201ENST00000295522 USP17L10C9JJH3 530 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 VILLO15195 856 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 FKBP6O75344 327 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 PDGFRBP09619 1106 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 TBC1D9BQ66K14 1250 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 FBXL19Q6PCT2 694 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 HPS6Q86YV9 775 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 ZCCHC9Q8N567 271 aaKnown RBP10.66□□□□□ -0.7
CLDN1-201ENST00000295522 AGR3Q8TD06 166 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 FAM172AQ8WUF8 416 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 GAB3Q8WWW8 586 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 GPR101Q96P66 508 aaPredicted RBP10.66□□□□□ -0.7
CLDN1-201ENST00000295522 C11orf70Q9BRQ4 267 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 WWP1Q9H0M0 922 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 CAAP1Q9H8G2 361 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 SPATA7Q9P0W8 599 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 ZBTB21Q9ULJ3 1066 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 PCDHGB4Q9UN71 923 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 CLEC11AQ9Y240 323 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 PCDHGB5Q9Y5G0 923 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 HEY1Q9Y5J3 304 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 RGPD5Q99666 1765 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 TYROBPO43914 113 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 NFKBIAP25963 317 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 GCAP28676 217 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 PTK7Q13308 1070 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 RASA3Q14644 834 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 CRLF3Q8IUI8 442 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 DEFB107AQ8IZN7 70 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 ETNPPLQ8TBG4 499 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 SKA1Q96BD8 255 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 GPR88Q9GZN0 384 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 PAIP1Q9H074 479 aaKnown RBP10.66□□□□□ -0.7
CLDN1-201ENST00000295522 F8W8V4 182 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 DDX39AO00148 427 aaKnown RBP10.66□□□□□ -0.7
CLDN1-201ENST00000295522 NOP56O00567 594 aaKnown RBP10.66□□□□□ -0.7
CLDN1-201ENST00000295522 TAL1P17542 331 aaPredicted RBP10.66□□□□□ -0.7
CLDN1-201ENST00000295522 ENTPD1P49961 510 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 MXI1P50539 228 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 UBXN2AP68543 259 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 ERFEQ4G0M1 354 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 C6orf52Q5T4I8 152 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 TMEM53Q6P2H8 277 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 C16orf87Q6PH81 154 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 LPCAT2Q7L5N7 544 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 NUDCD3Q8IVD9 361 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 PPM1NQ8N819 430 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 CFAP36Q96G28 342 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 PPP1R36Q96LQ0 422 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 SAE1Q9UBE0 346 aaPredicted RBP10.66□□□□□ -0.7
CLDN1-201ENST00000295522 SOX13Q9UN79 622 aa10.66□□□□□ -0.7
CLDN1-201ENST00000295522 K7ENM7 598 aa10.65□□□□□ -0.7
CLDN1-201ENST00000295522 CYB561D2O14569 222 aa10.65□□□□□ -0.7
CLDN1-201ENST00000295522 TCEA3O75764 348 aa10.65□□□□□ -0.7
CLDN1-201ENST00000295522 KRT1P04264 644 aa10.65□□□□□ -0.7
CLDN1-201ENST00000295522 VARSP26640 1264 aaKnown RBP10.65□□□□□ -0.7
CLDN1-201ENST00000295522 CRKLP46109 303 aaKnown RBP10.65□□□□□ -0.7
CLDN1-201ENST00000295522 TBL3Q12788 808 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms