RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 PSTPIP1O43586 416 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 CD4P01730 458 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 FAM163BP0C2L3 166 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 LRPAP1P30533 357 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 TAP1Q03518 808 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 ITGA7Q13683 1181 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 PTGISQ16647 500 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 LLGL2Q6P1M3 1020 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 DNAJC24Q6P3W2 148 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 DDX42Q86XP3 938 aaKnown RBP eCLIP9.68□□□□□ -0.86
PDPN-201ENST00000294489 TSEN2Q8NCE0 465 aaKnown RBP9.68□□□□□ -0.86
PDPN-201ENST00000294489 ARRDC4Q8NCT1 418 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 PPP1R10Q96QC0 940 aaKnown RBP9.68□□□□□ -0.86
PDPN-201ENST00000294489 ERP44Q9BS26 406 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 ELOVL4Q9GZR5 314 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 RNF39Q9H2S5 420 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 TUBGCP4Q9UGJ1 667 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 PCYOX1Q9UHG3 505 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 KIAA1257Q9ULG3 409 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 STRIP2Q9ULQ0 834 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 BARX2Q9UMQ3 279 aaPredicted RBP9.68□□□□□ -0.86
PDPN-201ENST00000294489 ST3GAL5Q9UNP4 418 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.68□□□□□ -0.86
PDPN-201ENST00000294489 CAPN15O75808 1086 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 GBP1P32455 592 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 MAN1A1P33908 653 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 SSR1P43307 286 aaKnown RBP9.68□□□□□ -0.86
PDPN-201ENST00000294489 MYO1EQ12965 1108 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 ARHGEF6Q15052 776 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 CYP1B1Q16678 543 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 PPP1R15BQ5SWA1 713 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 DCUN1D2Q6PH85 259 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 CCDC137Q6PK04 289 aaKnown RBP9.68□□□□□ -0.86
PDPN-201ENST00000294489 TRAF7Q6Q0C0 670 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 ZNF771Q7L3S4 317 aaPredicted RBP9.68□□□□□ -0.86
PDPN-201ENST00000294489 JAMLQ86YT9 394 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 RAET1EQ8TD07 263 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 EXOC4Q96A65 974 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 C18orf8Q96DM3 657 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 TMEM176AQ96HP8 235 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 TWNKQ96RR1 684 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 DPH5Q9H2P9 285 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 HES2Q9Y543 173 aa9.68□□□□□ -0.86
PDPN-201ENST00000294489 GOLGA8KD6RF30 607 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 INHAP05111 366 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 ECHS1P30084 290 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 HSPA9P38646 679 aaKnown RBP9.67□□□□□ -0.86
PDPN-201ENST00000294489 CETN2P41208 172 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 RAP1GAPP47736 663 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 FNTAP49354 379 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 CDH8P55286 799 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 DMTNQ08495 405 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 FBXO47Q5MNV8 452 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 CCDC105Q8IYK2 499 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 RIN2Q8WYP3 895 aaPredicted RBP9.67□□□□□ -0.86
PDPN-201ENST00000294489 C18orf25Q96B23 403 aaPredicted RBP9.67□□□□□ -0.86
PDPN-201ENST00000294489 TRIM51Q9BSJ1 452 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 SEZ6LQ9BYH1 1024 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 TRIM31Q9BZY9 425 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 PHF24Q9UPV7 400 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 TDRD15B5MCY1 1934 aaKnown RBP9.67□□□□□ -0.86
PDPN-201ENST00000294489 PTGESO14684 152 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 FSCN2O14926 492 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 GPR182O15218 404 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 INPPL1O15357 1258 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 ZNF623O75123 536 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 RARAP10276 462 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 VDRP11473 427 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 GABRB2P47870 512 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 GYS2P54840 703 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 DRG2P55039 364 aaKnown RBP9.67□□□□□ -0.86
PDPN-201ENST00000294489 MTMR3Q13615 1198 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 CNGA2Q16280 664 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 SGO2Q562F6 1265 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 CCDC50Q8IVM0 306 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 ZNF296Q8WUU4 475 aaPredicted RBP9.67□□□□□ -0.86
PDPN-201ENST00000294489 TRIM6Q9C030 488 aaPredicted RBP9.67□□□□□ -0.86
PDPN-201ENST00000294489 BCCIPQ9P287 314 aaKnown RBP eCLIP9.67□□□□□ -0.86
PDPN-201ENST00000294489 HMGXB4Q9UGU5 601 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.67□□□□□ -0.86
PDPN-201ENST00000294489 USTQ9Y2C2 406 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 TMEM191CA6NGB0 347 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 PPEF2O14830 753 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 XPOTO43592 962 aaKnown RBP9.67□□□□□ -0.86
PDPN-201ENST00000294489 RPS6KA5O75582 802 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 AKAP5P24588 427 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 COILP38432 576 aaPredicted RBP9.67□□□□□ -0.86
PDPN-201ENST00000294489 PNPLA4P41247 253 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 DUPD1Q68J44 220 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 IQCKQ8N0W5 287 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 C12orf50Q8NA57 414 aaPredicted RBP9.67□□□□□ -0.86
PDPN-201ENST00000294489 GSTCDQ8NEC7 633 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 DDX27Q96GQ7 796 aaKnown RBP9.67□□□□□ -0.86
PDPN-201ENST00000294489 ZIM3Q96PE6 472 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 LRRC19Q9H756 370 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 FAM204AQ9H8W3 233 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 PARP2Q9UGN5 583 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 NME7Q9Y5B8 376 aa9.67□□□□□ -0.86
PDPN-201ENST00000294489 PIGHQ14442 188 aaPredicted RBP9.66□□□□□ -0.86
PDPN-201ENST00000294489 LPIN1Q14693 890 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms