RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 LIN7AO14910 233 aaPredicted RBP15.45■□□□□ 0.06
CCNF-201ENST00000293968 MRPS9P82933 396 aaKnown RBP15.45■□□□□ 0.06
CCNF-201ENST00000293968 OTUD4Q01804 1114 aaKnown RBP15.45■□□□□ 0.06
CCNF-201ENST00000293968 FNBP1LQ5T0N5 605 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 ANO5Q75V66 913 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 FAM71DQ8N9W8 422 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 ACTL9Q8TC94 416 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 SLC13A1Q9BZW2 595 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 ZCWPW1Q9H0M4 648 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 XPO7Q9UIA9 1087 aaKnown RBP15.45■□□□□ 0.06
CCNF-201ENST00000293968 B2RBV5 119 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 KIF3CO14782 793 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 PSMA2P25787 234 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.45■□□□□ 0.06
CCNF-201ENST00000293968 OGFOD1Q8N543 542 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 HSPH1Q92598 858 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 PTPRN2Q92932 1015 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 MFSD14AQ96MC6 490 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 FAM237BA0A1B0GVD1 139 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 E7ENQ6 273 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 I3L4J1 428 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 ALOX15BO15296 676 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 MAGEB2O15479 319 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 LGR5O75473 907 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 STAM2O75886 525 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 RAD17O75943 681 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 CCNE2O96020 404 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 RPS6P62753 249 aaKnown RBP15.45■□□□□ 0.06
CCNF-201ENST00000293968 PTK7Q13308 1070 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 LRRC36Q1X8D7 754 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 TMEM132AQ24JP5 1023 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 ACSBG2Q5FVE4 666 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 RINLQ6ZS11 566 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 ZNF677Q86XU0 584 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 PPP1R14CQ8TAE6 165 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 SLC24A2Q9UI40 661 aa15.45■□□□□ 0.06
CCNF-201ENST00000293968 A6NHS1 94 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 CIB2O75838 187 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 GPX6P59796 221 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 MSS51Q4VC12 460 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 LRRC74BQ6ZQY2 392 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 ZBTB33Q86T24 672 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 SLC25A41Q8N5S1 370 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 MSTO1Q9BUK6 570 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 TMEM39BQ9GZU3 492 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 FEM1BQ9UK73 627 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 GDF10P55107 478 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 KLHL38Q2WGJ6 581 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 MCF2L2Q86YR7 1114 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 C4orf19Q8IY42 314 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 PPM1NQ8N819 430 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 SERPINA10Q9UK55 444 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 GSC2O15499 205 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 ENTPD3O75355 529 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 PYGBP11216 843 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 SP100P23497 879 aaPredicted RBP15.44■□□□□ 0.06
CCNF-201ENST00000293968 TMPRSS15P98073 1019 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 DLGAP5Q15398 846 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 TFDP3Q5H9I0 405 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 RNASEH2BQ5TBB1 312 aaKnown RBP15.44■□□□□ 0.06
CCNF-201ENST00000293968 RASIP1Q5U651 963 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 DEPTORQ8TB45 409 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 WDR60Q8WVS4 1066 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 WASF2Q9Y6W5 498 aa15.44■□□□□ 0.06
CCNF-201ENST00000293968 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.44■□□□□ 0.06
CCNF-201ENST00000293968 ARHGAP42A6NI28 874 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 MAP3K13O43283 966 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 TYROBPO43914 113 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 CYP1A1P04798 512 aaPredicted RBP15.43■□□□□ 0.06
CCNF-201ENST00000293968 MMP10P09238 476 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 JAK3P52333 1124 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 WNT7BP56706 349 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 SNRPFP62306 86 aaKnown RBP15.43■□□□□ 0.06
CCNF-201ENST00000293968 SMAD1Q15797 465 aaKnown RBP15.43■□□□□ 0.06
CCNF-201ENST00000293968 ZBTB41Q5SVQ8 909 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 ALYREFQ86V81 257 aaKnown RBP15.43■□□□□ 0.06
CCNF-201ENST00000293968 ANKRD27Q96NW4 1050 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 EURLQ9NYK6 297 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 NUMBLQ9Y6R0 609 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 COL5A3P25940 1745 aaPredicted RBP15.43■□□□□ 0.06
CCNF-201ENST00000293968 PSMG1O95456 288 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 B3GNT9Q6UX72 402 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 SYTL5Q8TDW5 730 aaPredicted RBP15.43■□□□□ 0.06
CCNF-201ENST00000293968 ZNF606Q8WXB4 792 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 MASTLQ96GX5 879 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 APOBEC3GQ9HC16 384 aaKnown RBP15.43■□□□□ 0.06
CCNF-201ENST00000293968 FCHO1O14526 889 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 WEE2P0C1S8 567 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 ACADSP16219 412 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 SERPINB4P48594 390 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 CCNG1P51959 295 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 SLC34A1Q06495 639 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 TRIM72Q6ZMU5 477 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 PPIL6Q8IXY8 311 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 HIPK4Q8NE63 616 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 FGD4Q96M96 766 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 THTPAQ9BU02 230 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 SAR1AQ9NR31 198 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 SLC9A2Q9UBY0 812 aa15.43■□□□□ 0.06
CCNF-201ENST00000293968 HERC5Q9UII4 1024 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms