RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 F5H5T6 163 aa18.02■□□□□ 0.48
SHANK1-201ENST00000293441 TMEM253P0C7T8 217 aa18.02■□□□□ 0.48
SHANK1-201ENST00000293441 KLRC1P26715 233 aa18.02■□□□□ 0.48
SHANK1-201ENST00000293441 OCA2Q04671 838 aa18.02■□□□□ 0.48
SHANK1-201ENST00000293441 ADGRF2Q8IZF7 708 aa18.02■□□□□ 0.48
SHANK1-201ENST00000293441 YY1AP1Q9H869 796 aa18.02■□□□□ 0.48
SHANK1-201ENST00000293441 SOAT1P35610 550 aa18.02■□□□□ 0.47
SHANK1-201ENST00000293441 PTGER2P43116 358 aa18.02■□□□□ 0.47
SHANK1-201ENST00000293441 BLVRAP53004 296 aa18.02■□□□□ 0.47
SHANK1-201ENST00000293441 TTC39BQ5VTQ0 682 aaPredicted RBP18.02■□□□□ 0.47
SHANK1-201ENST00000293441 HNRNPH2P55795 449 aaKnown RBP18.02■□□□□ 0.47
SHANK1-201ENST00000293441 HIC1Q14526 733 aa18.02■□□□□ 0.47
SHANK1-201ENST00000293441 CCDC33Q8N5R6 958 aa18.02■□□□□ 0.47
SHANK1-201ENST00000293441 ALG6Q9Y672 507 aa18.02■□□□□ 0.47
SHANK1-201ENST00000293441 CHUKO15111 745 aa18.01■□□□□ 0.47
SHANK1-201ENST00000293441 CCDC15Q0P6D6 951 aa18.01■□□□□ 0.47
SHANK1-201ENST00000293441 ANO5Q75V66 913 aa18.01■□□□□ 0.47
SHANK1-201ENST00000293441 ZFYVE19Q96K21 471 aa18.01■□□□□ 0.47
SHANK1-201ENST00000293441 STOML1Q9UBI4 398 aa18.01■□□□□ 0.47
SHANK1-201ENST00000293441 SMG5Q9UPR3 1016 aaKnown RBP18.01■□□□□ 0.47
SHANK1-201ENST00000293441 SEC24DO94855 1032 aaPredicted RBP18.01■□□□□ 0.47
SHANK1-201ENST00000293441 SGPL1O95470 568 aa18.01■□□□□ 0.47
SHANK1-201ENST00000293441 ENO3P13929 434 aaPredicted RBP18.01■□□□□ 0.47
SHANK1-201ENST00000293441 KCNJ1P48048 391 aa18.01■□□□□ 0.47
SHANK1-201ENST00000293441 GRB10Q13322 594 aa18.01■□□□□ 0.47
SHANK1-201ENST00000293441 POLD3Q15054 466 aaPredicted RBP18.01■□□□□ 0.47
SHANK1-201ENST00000293441 CTXN3Q4LDR2 81 aa18.01■□□□□ 0.47
SHANK1-201ENST00000293441 DAGLBQ8NCG7 672 aa18.01■□□□□ 0.47
SHANK1-201ENST00000293441 ITGA8P53708 1063 aa18.01■□□□□ 0.47
SHANK1-201ENST00000293441 MAP3K7CLP57077 242 aa18.01■□□□□ 0.47
SHANK1-201ENST00000293441 RBM12Q9NTZ6 932 aaKnown RBP18.01■□□□□ 0.47
SHANK1-201ENST00000293441 DIP2CQ9Y2E4 1556 aa18.01■□□□□ 0.47
SHANK1-201ENST00000293441 RBP3P10745 1247 aa18.01■□□□□ 0.47
SHANK1-201ENST00000293441 CHN1P15882 459 aa18.01■□□□□ 0.47
SHANK1-201ENST00000293441 PTK6Q13882 451 aa18.01■□□□□ 0.47
SHANK1-201ENST00000293441 SPATA21Q7Z572 469 aa18.01■□□□□ 0.47
SHANK1-201ENST00000293441 KCTD17Q8N5Z5 321 aa18.01■□□□□ 0.47
SHANK1-201ENST00000293441 PCSK9Q8NBP7 692 aaKnown RBP18.01■□□□□ 0.47
SHANK1-201ENST00000293441 CEP70Q8NHQ1 597 aa18.01■□□□□ 0.47
SHANK1-201ENST00000293441 CELF4Q9BZC1 486 aaKnown RBP18.01■□□□□ 0.47
SHANK1-201ENST00000293441 A0A1W2PQJ5 194 aa18.01■□□□□ 0.47
SHANK1-201ENST00000293441 AGTP01019 485 aa18.01■□□□□ 0.47
SHANK1-201ENST00000293441 EPB42P16452 691 aa18.01■□□□□ 0.47
SHANK1-201ENST00000293441 BLOC1S5Q8TDH9 187 aa18.01■□□□□ 0.47
SHANK1-201ENST00000293441 ZNF669Q96BR6 464 aaPredicted RBP18.01■□□□□ 0.47
SHANK1-201ENST00000293441 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.01■□□□□ 0.47
SHANK1-201ENST00000293441 DDNO94850 711 aaPredicted RBP18■□□□□ 0.47
SHANK1-201ENST00000293441 URODP06132 367 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 PGM1P36871 562 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 NAPEPLDQ6IQ20 393 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 MRPS31Q92665 395 aaKnown RBP18■□□□□ 0.47
SHANK1-201ENST00000293441 RTFDC1Q9BY42 306 aaPredicted RBP18■□□□□ 0.47
SHANK1-201ENST00000293441 CDYLQ9Y232 598 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 HEATR9A2RTY3 570 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 MUTP22033 750 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 DNAJB2P25686 324 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 MAGEA4P43358 317 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 FAM32AQ9Y421 112 aaKnown RBP18■□□□□ 0.47
SHANK1-201ENST00000293441 SLC2A3P11169 496 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 JAMLQ86YT9 394 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 SCUBE2Q9NQ36 999 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 DDTLA6NHG4 134 aaPredicted RBP18■□□□□ 0.47
SHANK1-201ENST00000293441 CASTOR2A6NHX0 329 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 MYO1GB0I1T2 1018 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 NFIBO00712 420 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 TAL1P17542 331 aaPredicted RBP18■□□□□ 0.47
SHANK1-201ENST00000293441 CARSP49589 748 aaKnown RBP18■□□□□ 0.47
SHANK1-201ENST00000293441 DMC1Q14565 340 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 INPP5AQ14642 412 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 CCDC85BQ15834 202 aaPredicted RBP18■□□□□ 0.47
SHANK1-201ENST00000293441 RPAINQ86UA6 219 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 CBWD2Q8IUF1 395 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 KLF6Q99612 283 aaPredicted RBP18■□□□□ 0.47
SHANK1-201ENST00000293441 PDHXO00330 501 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 RAD51CO43502 376 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 ENDOD1O94919 500 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 MAP3K6O95382 1288 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 PLA2G4AP47712 749 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 LY6KQ17RY6 165 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 FAXCQ5TGI0 409 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 DENND5BQ6ZUT9 1274 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 MRPL1Q9BYD6 325 aaKnown RBP18■□□□□ 0.47
SHANK1-201ENST00000293441 BRD8Q9H0E9 1235 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 CAPN10Q9HC96 672 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 SLC39A10Q9ULF5 831 aa18■□□□□ 0.47
SHANK1-201ENST00000293441 PPP1R3GB7ZBB8 358 aa17.99■□□□□ 0.47
SHANK1-201ENST00000293441 THP07101 528 aa17.99■□□□□ 0.47
SHANK1-201ENST00000293441 AVPR1AP37288 418 aa17.99■□□□□ 0.47
SHANK1-201ENST00000293441 NPTX2P47972 431 aa17.99■□□□□ 0.47
SHANK1-201ENST00000293441 ATXN3P54252 364 aaPredicted RBP17.99■□□□□ 0.47
SHANK1-201ENST00000293441 RARS2Q5T160 578 aaKnown RBP17.99■□□□□ 0.47
SHANK1-201ENST00000293441 RUBCNQ92622 972 aa17.99■□□□□ 0.47
SHANK1-201ENST00000293441 AKT1S1Q96B36 256 aa17.99■□□□□ 0.47
SHANK1-201ENST00000293441 THAP2Q9H0W7 228 aa17.99■□□□□ 0.47
SHANK1-201ENST00000293441 CKMP06732 381 aa17.99■□□□□ 0.47
SHANK1-201ENST00000293441 C17orf80Q9BSJ5 609 aa17.99■□□□□ 0.47
SHANK1-201ENST00000293441 GYPCP04921 128 aa17.99■□□□□ 0.47
SHANK1-201ENST00000293441 OOSP2Q86WS3 158 aa17.99■□□□□ 0.47
SHANK1-201ENST00000293441 MYCBPQ99417 103 aaPredicted RBP17.99■□□□□ 0.47
SHANK1-201ENST00000293441 POP1Q99575 1024 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms