RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 GOLGA6L10A6NI86 522 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 KPNA6O60684 536 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 ALDH1A1P00352 501 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 CCND3P30281 292 aaPredicted RBP14.86□□□□□ -0.03
ABCF3-201ENST00000292808 KCNJ1P48048 391 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 TAS2R40P59535 323 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 DHX9Q08211 1270 aaKnown RBP14.86□□□□□ -0.03
ABCF3-201ENST00000292808 SIX1Q15475 284 aaPredicted RBP14.86□□□□□ -0.03
ABCF3-201ENST00000292808 PTPN20Q4JDL3 420 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 PPP1R2P3Q6NXS1 205 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 CCDC105Q8IYK2 499 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 NME8Q8N427 588 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 SMG8Q8ND04 991 aaKnown RBP14.86□□□□□ -0.03
ABCF3-201ENST00000292808 TXLNGYQ9BZA5 131 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 ZNF518BQ9C0D4 1074 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 RNF186Q9NXI6 227 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 PTPN22Q9Y2R2 807 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 ELNP15502 786 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 NR1D1P20393 614 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 CYP3A5P20815 502 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 COILP38432 576 aaPredicted RBP14.86□□□□□ -0.03
ABCF3-201ENST00000292808 PLTPP55058 493 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 OGDHQ02218 1023 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 CYP4A22Q5TCH4 519 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 APBB1IPQ7Z5R6 666 aaPredicted RBP14.86□□□□□ -0.03
ABCF3-201ENST00000292808 ARRDC4Q8NCT1 418 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 FEZF2Q8TBJ5 459 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 DDX27Q96GQ7 796 aaKnown RBP14.86□□□□□ -0.03
ABCF3-201ENST00000292808 TMEM176AQ96HP8 235 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 FMO2Q99518 471 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 HERPUD2Q9BSE4 406 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 LHX5Q9H2C1 402 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 CENPHQ9H3R5 247 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 KLK14Q9P0G3 267 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 PCYOX1Q9UHG3 505 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 USTQ9Y2C2 406 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 SCINQ9Y6U3 715 aa14.86□□□□□ -0.03
ABCF3-201ENST00000292808 TMEM191CA6NGB0 347 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 TLR3O15455 904 aaKnown RBP14.85□□□□□ -0.03
ABCF3-201ENST00000292808 PPFIA2O75334 1257 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 CALB1P05937 261 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 MYZAPP0CAP1 466 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 GNAT1P11488 350 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 SLC1A1P43005 524 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 SSR1P43307 286 aaKnown RBP14.85□□□□□ -0.03
ABCF3-201ENST00000292808 NDST1P52848 882 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 NOGQ13253 232 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 XKR4Q5GH76 650 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 TAF2Q6P1X5 1199 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 C1orf54Q8WWF1 131 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 MRPL47Q9HD33 250 aaKnown RBP14.85□□□□□ -0.03
ABCF3-201ENST00000292808 PARVAQ9NVD7 372 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.85□□□□□ -0.03
ABCF3-201ENST00000292808 HTTP42858 3142 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 SRRM3A6NNA2 597 aaPredicted RBP14.85□□□□□ -0.03
ABCF3-201ENST00000292808 MYO1CO00159 1063 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 GJC1P36383 396 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 YARSP54577 528 aaKnown RBP14.85□□□□□ -0.03
ABCF3-201ENST00000292808 MRPS6P82932 125 aaKnown RBP14.85□□□□□ -0.03
ABCF3-201ENST00000292808 ZNF844Q08AG5 666 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 SNX1Q13596 522 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 AGBL2Q5U5Z8 902 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 TTC19Q6DKK2 380 aaPredicted RBP14.85□□□□□ -0.03
ABCF3-201ENST00000292808 BCAS4Q8TDM0 211 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 MRPL45Q9BRJ2 306 aaKnown RBP14.85□□□□□ -0.03
ABCF3-201ENST00000292808 PLVAPQ9BX97 442 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 TSPYL1Q9H0U9 437 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 ZDHHC18Q9NUE0 388 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 LCMT1Q9UIC8 334 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 BARX2Q9UMQ3 279 aaPredicted RBP14.85□□□□□ -0.03
ABCF3-201ENST00000292808 ATP8A1Q9Y2Q0 1164 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 IPPQ9Y573 584 aa14.85□□□□□ -0.03
ABCF3-201ENST00000292808 SMIM28A0A1B0GU29 152 aa14.84□□□□□ -0.03
ABCF3-201ENST00000292808 MICAL2O94851 1124 aa14.84□□□□□ -0.03
ABCF3-201ENST00000292808 RARBP10826 455 aa14.84□□□□□ -0.03
ABCF3-201ENST00000292808 TCF4P15884 667 aa14.84□□□□□ -0.03
ABCF3-201ENST00000292808 RPL21P46778 160 aaKnown RBP14.84□□□□□ -0.03
ABCF3-201ENST00000292808 SOX4Q06945 474 aaPredicted RBP14.84□□□□□ -0.03
ABCF3-201ENST00000292808 CYP1B1Q16678 543 aa14.84□□□□□ -0.03
ABCF3-201ENST00000292808 C9orf57Q5W0N0 161 aa14.84□□□□□ -0.03
ABCF3-201ENST00000292808 CCSAPQ6IQ19 270 aaPredicted RBP14.84□□□□□ -0.03
ABCF3-201ENST00000292808 ARFGAP2Q8N6H7 521 aa14.84□□□□□ -0.03
ABCF3-201ENST00000292808 RUNDC3BQ96NL0 473 aa14.84□□□□□ -0.03
ABCF3-201ENST00000292808 CPXM1Q96SM3 734 aa14.84□□□□□ -0.03
ABCF3-201ENST00000292808 OSBPL7Q9BZF2 842 aa14.84□□□□□ -0.03
ABCF3-201ENST00000292808 TRIM6Q9C030 488 aaPredicted RBP14.84□□□□□ -0.03
ABCF3-201ENST00000292808 CDY2AQ9Y6F7 541 aa14.84□□□□□ -0.03
ABCF3-201ENST00000292808 PODXLO00592 558 aa14.84□□□□□ -0.03
ABCF3-201ENST00000292808 FSCN2O14926 492 aa14.84□□□□□ -0.03
ABCF3-201ENST00000292808 P4HA1P13674 534 aa14.84□□□□□ -0.03
ABCF3-201ENST00000292808 PRKAR2AP13861 404 aaKnown RBP14.84□□□□□ -0.03
ABCF3-201ENST00000292808 GBP1P32455 592 aa14.84□□□□□ -0.03
ABCF3-201ENST00000292808 SERINC5Q86VE9 423 aa14.84□□□□□ -0.03
ABCF3-201ENST00000292808 ERICH1Q86X53 443 aa14.84□□□□□ -0.03
ABCF3-201ENST00000292808 CCDC50Q8IVM0 306 aa14.84□□□□□ -0.03
ABCF3-201ENST00000292808 KLHDC9Q8NEP7 349 aa14.84□□□□□ -0.03
ABCF3-201ENST00000292808 FBXO25Q8TCJ0 367 aa14.84□□□□□ -0.03
ABCF3-201ENST00000292808 CAPNS2Q96L46 248 aa14.84□□□□□ -0.03
ABCF3-201ENST00000292808 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.84□□□□□ -0.03
ABCF3-201ENST00000292808 DNAH12Q6ZR08 3092 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms