RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 SLC43A3Q8NBI5 491 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 RASSF4Q9H2L5 321 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 PARP2Q9UGN5 583 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 COG5Q9UP83 839 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 EBAG9O00559 213 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 TTI1O43156 1089 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 PQBP1O60828 265 aaKnown RBP17.8■□□□□ 0.44
CPSF4-201ENST00000292476 RECQL4O94761 1208 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 KCNE1P15382 129 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 CYP3A5P20815 502 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 NFX1Q12986 1120 aaKnown RBP17.8■□□□□ 0.44
CPSF4-201ENST00000292476 UAP1Q16222 522 aaPredicted RBP17.8■□□□□ 0.44
CPSF4-201ENST00000292476 WDR72Q3MJ13 1102 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 XKR4Q5GH76 650 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 CEP85LQ5SZL2 805 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 UBXN11Q5T124 520 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 LRRC52Q8N7C0 313 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 RBBP8NLQ8NC74 664 aaPredicted RBP17.8■□□□□ 0.44
CPSF4-201ENST00000292476 BCAS4Q8TDM0 211 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 SLC20A1Q8WUM9 679 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 TRIM11Q96F44 468 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 HPDLQ96IR7 371 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 FAM84AQ96KN4 292 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 ZSWIM1Q9BR11 485 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 TRAIPQ9BWF2 469 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 DNAI2Q9GZS0 605 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 NXF3Q9H4D5 531 aaKnown RBP17.8■□□□□ 0.44
CPSF4-201ENST00000292476 CISHQ9NSE2 258 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 CTTNBP2NLQ9P2B4 639 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 UVRAGQ9P2Y5 699 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 SIX4Q9UIU6 781 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 AGAP1Q9UPQ3 857 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 IPPQ9Y573 584 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 ALG6Q9Y672 507 aa17.8■□□□□ 0.44
CPSF4-201ENST00000292476 ANK1P16157 1881 aa17.79■□□□□ 0.44
CPSF4-201ENST00000292476 TLR3O15455 904 aaKnown RBP17.79■□□□□ 0.44
CPSF4-201ENST00000292476 DAPK3O43293 454 aa17.79■□□□□ 0.44
CPSF4-201ENST00000292476 PHF2O75151 1096 aa17.79■□□□□ 0.44
CPSF4-201ENST00000292476 PPFIA2O75334 1257 aa17.79■□□□□ 0.44
CPSF4-201ENST00000292476 CYP1A2P05177 515 aa17.79■□□□□ 0.44
CPSF4-201ENST00000292476 CTSHP09668 335 aa17.79■□□□□ 0.44
CPSF4-201ENST00000292476 GNA15P30679 374 aa17.79■□□□□ 0.44
CPSF4-201ENST00000292476 POLR2BP30876 1174 aaKnown RBP17.79■□□□□ 0.44
CPSF4-201ENST00000292476 CHRNA3P32297 505 aa17.79■□□□□ 0.44
CPSF4-201ENST00000292476 DR1Q01658 176 aa17.79■□□□□ 0.44
CPSF4-201ENST00000292476 FMO1Q01740 532 aa17.79■□□□□ 0.44
CPSF4-201ENST00000292476 TLE2Q04725 743 aa17.79■□□□□ 0.44
CPSF4-201ENST00000292476 ZBTB6Q15916 424 aa17.79■□□□□ 0.44
CPSF4-201ENST00000292476 DUPD1Q68J44 220 aa17.79■□□□□ 0.44
CPSF4-201ENST00000292476 B4GALNT4Q76KP1 1039 aa17.79■□□□□ 0.44
CPSF4-201ENST00000292476 PALB2Q86YC2 1186 aa17.79■□□□□ 0.44
CPSF4-201ENST00000292476 DDX1Q92499 740 aaKnown RBP17.79■□□□□ 0.44
CPSF4-201ENST00000292476 ERP44Q9BS26 406 aa17.79■□□□□ 0.44
CPSF4-201ENST00000292476 BCO2Q9BYV7 579 aa17.79■□□□□ 0.44
CPSF4-201ENST00000292476 TXLNGYQ9BZA5 131 aa17.79■□□□□ 0.44
CPSF4-201ENST00000292476 PRDM5Q9NQX1 630 aaPredicted RBP17.79■□□□□ 0.44
CPSF4-201ENST00000292476 ARVCFO00192 962 aa17.78■□□□□ 0.44
CPSF4-201ENST00000292476 MEFVO15553 781 aaPredicted RBP17.78■□□□□ 0.44
CPSF4-201ENST00000292476 CHRNB2P17787 502 aa17.78■□□□□ 0.44
CPSF4-201ENST00000292476 CTNNA2P26232 953 aa17.78■□□□□ 0.44
CPSF4-201ENST00000292476 CTNNA1P35221 906 aaKnown RBP17.78■□□□□ 0.44
CPSF4-201ENST00000292476 PNPLA4P41247 253 aa17.78■□□□□ 0.44
CPSF4-201ENST00000292476 MAGEA9P43362 315 aa17.78■□□□□ 0.44
CPSF4-201ENST00000292476 ASPAP45381 313 aa17.78■□□□□ 0.44
CPSF4-201ENST00000292476 FBXO47Q5MNV8 452 aa17.78■□□□□ 0.44
CPSF4-201ENST00000292476 C1orf53Q5VUE5 145 aa17.78■□□□□ 0.44
CPSF4-201ENST00000292476 SH2D3CQ8N5H7 860 aa17.78■□□□□ 0.44
CPSF4-201ENST00000292476 UBR7Q8N806 425 aa17.78■□□□□ 0.44
CPSF4-201ENST00000292476 C3orf20Q8ND61 904 aa17.78■□□□□ 0.44
CPSF4-201ENST00000292476 CXorf38Q8TB03 319 aa17.78■□□□□ 0.44
CPSF4-201ENST00000292476 EPN3Q9H201 632 aa17.78■□□□□ 0.44
CPSF4-201ENST00000292476 NEUROG2Q9H2A3 272 aa17.78■□□□□ 0.44
CPSF4-201ENST00000292476 SLC38A7Q9NVC3 462 aa17.78■□□□□ 0.44
CPSF4-201ENST00000292476 NXF1Q9UBU9 619 aaKnown RBP17.78■□□□□ 0.44
CPSF4-201ENST00000292476 PCYOX1Q9UHG3 505 aa17.78■□□□□ 0.44
CPSF4-201ENST00000292476 LCMT1Q9UIC8 334 aa17.78■□□□□ 0.44
CPSF4-201ENST00000292476 GTF3C4Q9UKN8 822 aa17.78■□□□□ 0.44
CPSF4-201ENST00000292476 PODXLO00592 558 aa17.77■□□□□ 0.44
CPSF4-201ENST00000292476 MMEP08473 750 aa17.77■□□□□ 0.44
CPSF4-201ENST00000292476 ZNF132P52740 706 aa17.77■□□□□ 0.44
CPSF4-201ENST00000292476 ZNF844Q08AG5 666 aa17.77■□□□□ 0.44
CPSF4-201ENST00000292476 PTPROQ16827 1216 aa17.77■□□□□ 0.44
CPSF4-201ENST00000292476 SEL1L2Q5TEA6 688 aa17.77■□□□□ 0.44
CPSF4-201ENST00000292476 ACAD10Q6JQN1 1059 aa17.77■□□□□ 0.44
CPSF4-201ENST00000292476 ALG3Q92685 438 aa17.77■□□□□ 0.44
CPSF4-201ENST00000292476 CD101Q93033 1021 aa17.77■□□□□ 0.44
CPSF4-201ENST00000292476 WNT8BQ93098 351 aa17.77■□□□□ 0.44
CPSF4-201ENST00000292476 FMO2Q99518 471 aa17.77■□□□□ 0.44
CPSF4-201ENST00000292476 PLEKHA4Q9H4M7 779 aa17.77■□□□□ 0.44
CPSF4-201ENST00000292476 ERVK-5Q9HDB9 667 aa17.77■□□□□ 0.44
CPSF4-201ENST00000292476 UBN1Q9NPG3 1134 aa17.77■□□□□ 0.44
CPSF4-201ENST00000292476 TRMT13Q9NUP7 481 aaKnown RBP17.77■□□□□ 0.44
CPSF4-201ENST00000292476 FAM105AQ9NUU6 356 aa17.77■□□□□ 0.44
CPSF4-201ENST00000292476 GGA2Q9UJY4 613 aa17.77■□□□□ 0.44
CPSF4-201ENST00000292476 CITO14578 2027 aa17.77■□□□□ 0.44
CPSF4-201ENST00000292476 RALGAPA2Q2PPJ7 1873 aa17.77■□□□□ 0.44
CPSF4-201ENST00000292476 MED7O43513 233 aa17.77■□□□□ 0.43
CPSF4-201ENST00000292476 PAEPP09466 180 aa17.77■□□□□ 0.43
CPSF4-201ENST00000292476 MYBL1P10243 752 aa17.77■□□□□ 0.43
CPSF4-201ENST00000292476 LSP1P33241 339 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms