RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 KCNH7Q9NS40 1196 aa15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 GIMAP4Q9NUV9 329 aa15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 PIN4Q9Y237 131 aaKnown RBP15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 CLTCQ00610 1675 aaKnown RBP15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 TMEM247A6NEH6 219 aa15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 POLBP06746 335 aa15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 RPL21P46778 160 aaKnown RBP15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 ATPAF2Q8N5M1 289 aa15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 SLC7A14Q8TBB6 771 aa15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 MMTAG2Q9BU76 263 aaKnown RBP15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 RXFP1Q9HBX9 757 aa15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 NTSR2O95665 410 aa15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 RARGP13631 454 aa15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 CYP11B1P15538 503 aa15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 LINC00116Q8NCU8 138 aa15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 EPAS1Q99814 870 aa15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 BEGAINQ9BUH8 593 aa15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 PAPOLBQ9NRJ5 636 aaKnown RBP15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 CHRNA5P30532 468 aa15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 RASA2Q15283 850 aa15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 RSAD1Q9HA92 442 aa15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 CTNNAL1Q9UBT7 734 aa15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 PRPF4O43172 522 aaKnown RBP eCLIP15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 EFNA5P52803 228 aa15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 ACCSLQ4AC99 568 aa15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 UNKQ9C0B0 810 aaKnown RBP15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 ITSN1Q15811 1721 aa15.97■□□□□ 0.15
SHROOM4-201ENST00000289292 DEPDC5O75140 1603 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 AKAP3O75969 853 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 SPRP35270 261 aaPredicted RBP15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 GLRBP48167 497 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 BMPR2Q13873 1038 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 DCAF6Q58WW2 860 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 ACBD5Q5T8D3 534 aaPredicted RBP15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 IYDQ6PHW0 289 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 TTC33Q6PID6 262 aaPredicted RBP15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 TMCO5AQ8N6Q1 288 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 APPL2Q8NEU8 664 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 SLC10A4Q96EP9 437 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 TIPINQ9BVW5 301 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 NAALADL1Q9UQQ1 740 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 DNAJC16Q9Y2G8 782 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 H0Y626 953 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 PSTPIP1O43586 416 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 TRIM16O95361 564 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 CUL2Q13617 745 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 SGO1Q5FBB7 561 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 SLC30A10Q6XR72 485 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 TMC3Q7Z5M5 1100 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 SARSP49591 514 aaKnown RBP15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 B4GALNT2Q8NHY0 566 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 ZC3H15Q8WU90 426 aaKnown RBP15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 TARS2Q9BW92 718 aaKnown RBP15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 ETFBP38117 255 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 PPP4R4Q6NUP7 873 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 FBXO33Q7Z6M2 555 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 SP8Q8IXZ3 490 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 KIF20BQ96Q89 1820 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 CHCHD3Q9NX63 227 aaKnown RBP15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 KCND2Q9NZV8 630 aa15.96■□□□□ 0.15
SHROOM4-201ENST00000289292 SF3B3Q15393 1217 aaKnown RBP15.96■□□□□ 0.14
SHROOM4-201ENST00000289292 XKR3Q5GH77 459 aa15.96■□□□□ 0.14
SHROOM4-201ENST00000289292 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.96■□□□□ 0.14
SHROOM4-201ENST00000289292 USP13Q92995 863 aaPredicted RBP15.96■□□□□ 0.14
SHROOM4-201ENST00000289292 GTF3C4Q9UKN8 822 aa15.96■□□□□ 0.14
SHROOM4-201ENST00000289292 ARHGEF37A1IGU5 675 aa15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 E9PBE3 544 aa15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 KLHL41O60662 606 aa15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 OTUD4Q01804 1114 aaKnown RBP15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 KPNB1Q14974 876 aaKnown RBP15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 PABPC5Q96DU9 382 aaKnown RBP15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 MOV10L1Q9BXT6 1211 aaKnown RBP15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 MYLK2Q9H1R3 596 aa15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 GDF3Q9NR23 364 aa15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 WDR35Q9P2L0 1181 aa15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 FBXO40Q9UH90 709 aa15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 EPHB2P29323 1055 aa15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 HSD17B4P51659 736 aa15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 PSMC6P62333 389 aa15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 RINLQ6ZS11 566 aa15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 TAAR1Q96RJ0 339 aa15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 PPCSQ9HAB8 311 aa15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 CD274Q9NZQ7 290 aa15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 CDY2AQ9Y6F7 541 aa15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 CDY1Q9Y6F8 540 aa15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 MRPL28Q13084 256 aaKnown RBP15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 TBCCQ15814 346 aa15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 ITGB3P05106 788 aa15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 KRT16P08779 473 aa15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 FOXP3Q9BZS1 431 aa15.95■□□□□ 0.14
SHROOM4-201ENST00000289292 RRM1P23921 792 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 RBP5P82980 135 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 ATF7IP2Q5U623 682 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 PCNX4Q63HM2 1172 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 C11orf74Q86VG3 221 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 ASIC4Q96FT7 647 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 TXNP10599 105 aaKnown RBP15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 CACNA2D1P54289 1103 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 SOX10P56693 466 aa15.94■□□□□ 0.14
SHROOM4-201ENST00000289292 TCHHL1Q5QJ38 904 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms