RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 PDE1BQ01064 536 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 PSMD6Q15008 389 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 C6orf163Q5TEZ5 329 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 NPNTQ6UXI9 565 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 ZNF354CQ86Y25 554 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 MAP7D3Q8IWC1 876 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 EXD1Q8NHP7 514 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 CCHCR1Q8TD31 782 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 CGRRF1Q99675 332 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 CXorf56Q9H5V9 222 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 TJP2Q9UDY2 1190 aa16.7■□□□□ 0.26
SMAD6-201ENST00000288840 MAFGO15525 162 aa16.69■□□□□ 0.26
SMAD6-201ENST00000288840 KRT7P08729 469 aa16.69■□□□□ 0.26
SMAD6-201ENST00000288840 NAMPTP43490 491 aa16.69■□□□□ 0.26
SMAD6-201ENST00000288840 ELF3P78545 371 aaPredicted RBP16.69■□□□□ 0.26
SMAD6-201ENST00000288840 POU5F1Q01860 360 aaKnown RBP16.69■□□□□ 0.26
SMAD6-201ENST00000288840 DENND1BQ6P3S1 775 aa16.69■□□□□ 0.26
SMAD6-201ENST00000288840 GBP7Q8N8V2 638 aaPredicted RBP16.69■□□□□ 0.26
SMAD6-201ENST00000288840 MFSD14AQ96MC6 490 aa16.69■□□□□ 0.26
SMAD6-201ENST00000288840 KDM4CQ9H3R0 1056 aa16.69■□□□□ 0.26
SMAD6-201ENST00000288840 MRPL42Q9Y6G3 142 aaKnown RBP16.69■□□□□ 0.26
SMAD6-201ENST00000288840 MYH4Q9Y623 1939 aa16.69■□□□□ 0.26
SMAD6-201ENST00000288840 COPEO14579 308 aa16.69■□□□□ 0.26
SMAD6-201ENST00000288840 ANP32DO95626 131 aa16.69■□□□□ 0.26
SMAD6-201ENST00000288840 ATP6V1G2O95670 118 aa16.69■□□□□ 0.26
SMAD6-201ENST00000288840 VTNP04004 478 aa16.69■□□□□ 0.26
SMAD6-201ENST00000288840 ESRRAP11474 423 aaPredicted RBP16.69■□□□□ 0.26
SMAD6-201ENST00000288840 ZNF677Q86XU0 584 aa16.69■□□□□ 0.26
SMAD6-201ENST00000288840 PTPRJQ12913 1337 aa16.69■□□□□ 0.26
SMAD6-201ENST00000288840 PSTPIP1O43586 416 aa16.69■□□□□ 0.26
SMAD6-201ENST00000288840 RAD23BP54727 409 aa16.69■□□□□ 0.26
SMAD6-201ENST00000288840 ROR1Q01973 937 aa16.69■□□□□ 0.26
SMAD6-201ENST00000288840 MMRN1Q13201 1228 aa16.69■□□□□ 0.26
SMAD6-201ENST00000288840 RNF34Q969K3 372 aa16.69■□□□□ 0.26
SMAD6-201ENST00000288840 KIF12Q96FN5 646 aa16.69■□□□□ 0.26
SMAD6-201ENST00000288840 NCAPGQ9BPX3 1015 aa16.69■□□□□ 0.26
SMAD6-201ENST00000288840 DDX60LQ5H9U9 1706 aaKnown RBP16.68■□□□□ 0.26
SMAD6-201ENST00000288840 ADRA1DP25100 572 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 SNRPFP62306 86 aaKnown RBP16.68■□□□□ 0.26
SMAD6-201ENST00000288840 PTK6Q13882 451 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 ZRSR2Q15696 482 aaKnown RBP16.68■□□□□ 0.26
SMAD6-201ENST00000288840 SYDE1Q6ZW31 735 aaPredicted RBP16.68■□□□□ 0.26
SMAD6-201ENST00000288840 NIPA1Q7RTP0 329 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 NUDCD1Q96RS6 583 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 TRIM55Q9BYV6 548 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 XIRP1Q702N8 1843 aaKnown RBP16.68■□□□□ 0.26
SMAD6-201ENST00000288840 COL16A1Q07092 1604 aaPredicted RBP16.68■□□□□ 0.26
SMAD6-201ENST00000288840 GYG2O15488 501 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 LCP1P13796 627 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 SESN2P58004 480 aaPredicted RBP16.68■□□□□ 0.26
SMAD6-201ENST00000288840 SP2Q02086 613 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 LAMTOR4Q0VGL1 99 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 CAPSQ13938 189 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 PIGHQ14442 188 aaPredicted RBP16.68■□□□□ 0.26
SMAD6-201ENST00000288840 CFAP157Q5JU67 520 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 LONP2Q86WA8 852 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 CCT6BQ92526 530 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 DDX27Q96GQ7 796 aaKnown RBP16.68■□□□□ 0.26
SMAD6-201ENST00000288840 TTC25Q96NG3 672 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 CEP41Q9BYV8 373 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 SHCBP1LQ9BZQ2 653 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 PSMC3IPQ9P2W1 217 aaPredicted RBP16.68■□□□□ 0.26
SMAD6-201ENST00000288840 UTRNP46939 3433 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 TTLL13PA6NNM8 815 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 OGTO15294 1046 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 ASAP2O43150 1006 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 UBA1P22314 1058 aaKnown RBP16.68■□□□□ 0.26
SMAD6-201ENST00000288840 GCKP35557 465 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 BMPR2Q13873 1038 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 NFIL3Q16649 462 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 LGSNQ5TDP6 509 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 JOSD2Q8TAC2 188 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 RMDN2Q96LZ7 410 aa16.68■□□□□ 0.26
SMAD6-201ENST00000288840 ARAP2Q8WZ64 1704 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 KCNA2P16389 499 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 GAD2Q05329 585 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 KDSRQ06136 332 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 C15orf59Q2T9L4 293 aaPredicted RBP16.67■□□□□ 0.26
SMAD6-201ENST00000288840 MOB2Q70IA6 237 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 SAMD3Q8N6K7 520 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 STRIP2Q9ULQ0 834 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 CNTNAP1P78357 1384 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 AVILO75366 819 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 ARFIP2P53365 341 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 PTK7Q13308 1070 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 ACCSLQ4AC99 568 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 MROH9Q5TGP6 573 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 APBB1IPQ7Z5R6 666 aaPredicted RBP16.67■□□□□ 0.26
SMAD6-201ENST00000288840 MTDHQ86UE4 582 aaKnown RBP16.67■□□□□ 0.26
SMAD6-201ENST00000288840 AGAP3Q96P47 875 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 SMYD2Q9NRG4 433 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 ZNF541Q9H0D2 1346 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 STRCQ7RTU9 1775 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 NHSL1Q5SYE7 1610 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 SCN7AQ01118 1682 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 DNALI1O14645 258 aaPredicted RBP16.67■□□□□ 0.26
SMAD6-201ENST00000288840 CD48P09326 243 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 ELF1P32519 619 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 EEF1DP3Q658K8 133 aa16.67■□□□□ 0.26
SMAD6-201ENST00000288840 PPP1R36Q96LQ0 422 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms