RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 FKBP1BP68106 108 aa20.36■□□□□ 0.85
BRAF-201ENST00000288602 OLFML2BQ68BL8 750 aa20.36■□□□□ 0.85
BRAF-201ENST00000288602 C12orf29Q8N999 325 aa20.36■□□□□ 0.85
BRAF-201ENST00000288602 ZMAT2Q96NC0 199 aaKnown RBP20.36■□□□□ 0.85
BRAF-201ENST00000288602 RSPH14Q9UHP6 348 aa20.36■□□□□ 0.85
BRAF-201ENST00000288602 PAEPP09466 180 aa20.36■□□□□ 0.85
BRAF-201ENST00000288602 NDST1P52848 882 aa20.36■□□□□ 0.85
BRAF-201ENST00000288602 ITGA8P53708 1063 aa20.36■□□□□ 0.85
BRAF-201ENST00000288602 CATSPER4Q7RTX7 472 aa20.36■□□□□ 0.85
BRAF-201ENST00000288602 ARFGAP1Q8N6T3 406 aa20.36■□□□□ 0.85
BRAF-201ENST00000288602 BCAS4Q8TDM0 211 aa20.36■□□□□ 0.85
BRAF-201ENST00000288602 KAT2BQ92831 832 aa20.36■□□□□ 0.85
BRAF-201ENST00000288602 DDX23Q9BUQ8 820 aaKnown RBP20.36■□□□□ 0.85
BRAF-201ENST00000288602 APOL6Q9BWW8 343 aa20.36■□□□□ 0.85
BRAF-201ENST00000288602 LHX5Q9H2C1 402 aa20.36■□□□□ 0.85
BRAF-201ENST00000288602 AAASQ9NRG9 546 aa20.36■□□□□ 0.85
BRAF-201ENST00000288602 LRRD1A4D1F6 860 aa20.35■□□□□ 0.85
BRAF-201ENST00000288602 IGF2BP3O00425 579 aaKnown RBP eCLIP20.35■□□□□ 0.85
BRAF-201ENST00000288602 SLCO1A2P46721 670 aa20.35■□□□□ 0.85
BRAF-201ENST00000288602 ZNF200P98182 395 aaPredicted RBP20.35■□□□□ 0.85
BRAF-201ENST00000288602 PTK6Q13882 451 aa20.35■□□□□ 0.85
BRAF-201ENST00000288602 XYLT1Q86Y38 959 aa20.35■□□□□ 0.85
BRAF-201ENST00000288602 RCOR2Q8IZ40 523 aa20.35■□□□□ 0.85
BRAF-201ENST00000288602 GLIS1Q8NBF1 620 aa20.35■□□□□ 0.85
BRAF-201ENST00000288602 DNPEPQ9ULA0 475 aa20.35■□□□□ 0.85
BRAF-201ENST00000288602 SCN1AP35498 2009 aa20.35■□□□□ 0.85
BRAF-201ENST00000288602 SLC15A5A6NIM6 579 aa20.35■□□□□ 0.85
BRAF-201ENST00000288602 GPR32O75388 356 aa20.35■□□□□ 0.85
BRAF-201ENST00000288602 GAS8O95995 478 aa20.35■□□□□ 0.85
BRAF-201ENST00000288602 ATICP31939 592 aa20.35■□□□□ 0.85
BRAF-201ENST00000288602 GBP1P32455 592 aa20.35■□□□□ 0.85
BRAF-201ENST00000288602 HUNKP57058 714 aa20.35■□□□□ 0.85
BRAF-201ENST00000288602 PIGHQ14442 188 aaPredicted RBP20.35■□□□□ 0.85
BRAF-201ENST00000288602 CCNG2Q16589 344 aa20.35■□□□□ 0.85
BRAF-201ENST00000288602 SPOCD1Q6ZMY3 1216 aa20.35■□□□□ 0.85
BRAF-201ENST00000288602 GSTA5Q7RTV2 222 aa20.35■□□□□ 0.85
BRAF-201ENST00000288602 ZNF410Q86VK4 478 aa20.35■□□□□ 0.85
BRAF-201ENST00000288602 SNF8Q96H20 258 aa20.35■□□□□ 0.85
BRAF-201ENST00000288602 STRIP2Q9ULQ0 834 aa20.35■□□□□ 0.85
BRAF-201ENST00000288602 RIPK2O43353 540 aa20.34■□□□□ 0.85
BRAF-201ENST00000288602 CYP3A5P20815 502 aa20.34■□□□□ 0.85
BRAF-201ENST00000288602 IL1R2P27930 398 aa20.34■□□□□ 0.85
BRAF-201ENST00000288602 RBP5P82980 135 aa20.34■□□□□ 0.85
BRAF-201ENST00000288602 BEX3Q00994 111 aa20.34■□□□□ 0.85
BRAF-201ENST00000288602 GRK7Q8WTQ7 553 aa20.34■□□□□ 0.85
BRAF-201ENST00000288602 WHRNQ9P202 907 aa20.34■□□□□ 0.85
BRAF-201ENST00000288602 SAE1Q9UBE0 346 aaPredicted RBP20.34■□□□□ 0.85
BRAF-201ENST00000288602 TUBGCP4Q9UGJ1 667 aa20.34■□□□□ 0.85
BRAF-201ENST00000288602 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.34■□□□□ 0.85
BRAF-201ENST00000288602 GNEQ9Y223 722 aaKnown RBP20.34■□□□□ 0.85
BRAF-201ENST00000288602 SIGLEC16A6NMB1 481 aa20.34■□□□□ 0.85
BRAF-201ENST00000288602 NUDT17P0C025 328 aa20.34■□□□□ 0.85
BRAF-201ENST00000288602 ATF2P15336 505 aa20.34■□□□□ 0.85
BRAF-201ENST00000288602 TLK2Q86UE8 772 aa20.34■□□□□ 0.85
BRAF-201ENST00000288602 EPS8L3Q8TE67 593 aaKnown RBP20.34■□□□□ 0.85
BRAF-201ENST00000288602 DNAJB3Q8WWF6 145 aa20.34■□□□□ 0.85
BRAF-201ENST00000288602 C18orf25Q96B23 403 aaPredicted RBP20.34■□□□□ 0.85
BRAF-201ENST00000288602 RBM41Q96IZ5 413 aaKnown RBP20.34■□□□□ 0.85
BRAF-201ENST00000288602 VRTNQ9H8Y1 702 aa20.34■□□□□ 0.85
BRAF-201ENST00000288602 PCSK1NQ9UHG2 260 aa20.34■□□□□ 0.85
BRAF-201ENST00000288602 ITGA11Q9UKX5 1188 aa20.34■□□□□ 0.85
BRAF-201ENST00000288602 NEU2Q9Y3R4 380 aa20.34■□□□□ 0.85
BRAF-201ENST00000288602 C2CD2Q9Y426 696 aa20.34■□□□□ 0.85
BRAF-201ENST00000288602 TRIP12Q14669 1992 aaPredicted RBP20.34■□□□□ 0.85
BRAF-201ENST00000288602 A6NJR5 290 aa20.33■□□□□ 0.85
BRAF-201ENST00000288602 LRCH4O75427 683 aa20.33■□□□□ 0.85
BRAF-201ENST00000288602 ACSL3O95573 720 aa20.33■□□□□ 0.85
BRAF-201ENST00000288602 IVLP07476 585 aa20.33■□□□□ 0.85
BRAF-201ENST00000288602 ZSCAN5DPP0CG00 497 aa20.33■□□□□ 0.85
BRAF-201ENST00000288602 CYP2C9P11712 490 aa20.33■□□□□ 0.85
BRAF-201ENST00000288602 RARGP13631 454 aa20.33■□□□□ 0.85
BRAF-201ENST00000288602 ETS1P14921 441 aa20.33■□□□□ 0.85
BRAF-201ENST00000288602 CYP2B6P20813 491 aa20.33■□□□□ 0.85
BRAF-201ENST00000288602 AKAP5P24588 427 aa20.33■□□□□ 0.85
BRAF-201ENST00000288602 MDH1P40925 334 aaKnown RBP20.33■□□□□ 0.85
BRAF-201ENST00000288602 GRM5P41594 1212 aa20.33■□□□□ 0.85
BRAF-201ENST00000288602 GPD2P43304 727 aa20.33■□□□□ 0.85
BRAF-201ENST00000288602 DYNLT1P63172 113 aa20.33■□□□□ 0.85
BRAF-201ENST00000288602 SPDYCQ5MJ68 293 aa20.33■□□□□ 0.85
BRAF-201ENST00000288602 ZNF365Q70YC5 407 aa20.33■□□□□ 0.85
BRAF-201ENST00000288602 TMEM40Q8WWA1 233 aa20.33■□□□□ 0.85
BRAF-201ENST00000288602 CDC42EP4Q9H3Q1 356 aaKnown RBP20.33■□□□□ 0.85
BRAF-201ENST00000288602 NXF3Q9H4D5 531 aaKnown RBP20.33■□□□□ 0.85
BRAF-201ENST00000288602 P4HA1P13674 534 aa20.33■□□□□ 0.84
BRAF-201ENST00000288602 ITIH2P19823 946 aa20.33■□□□□ 0.84
BRAF-201ENST00000288602 LSP1P33241 339 aa20.33■□□□□ 0.84
BRAF-201ENST00000288602 SEC24CP53992 1094 aa20.33■□□□□ 0.84
BRAF-201ENST00000288602 EIF3BP55884 814 aaKnown RBP20.33■□□□□ 0.84
BRAF-201ENST00000288602 TAP1Q03518 808 aa20.33■□□□□ 0.84
BRAF-201ENST00000288602 SLMAPQ14BN4 828 aa20.33■□□□□ 0.84
BRAF-201ENST00000288602 MORN1Q5T089 497 aa20.33■□□□□ 0.84
BRAF-201ENST00000288602 PIWIL1Q96J94 861 aaKnown RBP20.33■□□□□ 0.84
BRAF-201ENST00000288602 LPIN3Q9BQK8 851 aa20.33■□□□□ 0.84
BRAF-201ENST00000288602 MRPL45Q9BRJ2 306 aaKnown RBP20.33■□□□□ 0.84
BRAF-201ENST00000288602 GCOM2Q9BZD3 368 aaPredicted RBP20.33■□□□□ 0.84
BRAF-201ENST00000288602 BARX2Q9UMQ3 279 aaPredicted RBP20.33■□□□□ 0.84
BRAF-201ENST00000288602 SNX9Q9Y5X1 595 aa20.33■□□□□ 0.84
BRAF-201ENST00000288602 CETN2P41208 172 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 CCT5P48643 541 aa20.32■□□□□ 0.84
BRAF-201ENST00000288602 MAP2K5Q13163 448 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms