RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 SURF1Q15526 300 aa15.09■□□□□ 0.01
TPM1-202ENST00000288398 LPAL2Q16609 132 aa15.09■□□□□ 0.01
TPM1-202ENST00000288398 LAIR1Q6GTX8 287 aa15.09■□□□□ 0.01
TPM1-202ENST00000288398 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.09■□□□□ 0.01
TPM1-202ENST00000288398 LRRTM3Q86VH5 581 aa15.09■□□□□ 0.01
TPM1-202ENST00000288398 SPATA2LQ8IUW3 424 aaPredicted RBP15.09■□□□□ 0.01
TPM1-202ENST00000288398 ADGRF2Q8IZF7 708 aa15.09■□□□□ 0.01
TPM1-202ENST00000288398 ZNF687Q8N1G0 1237 aa15.09■□□□□ 0.01
TPM1-202ENST00000288398 GPD1LQ8N335 351 aa15.09■□□□□ 0.01
TPM1-202ENST00000288398 SYNPOQ8N3V7 929 aa15.09■□□□□ 0.01
TPM1-202ENST00000288398 MAB21L3Q8N8X9 362 aa15.09■□□□□ 0.01
TPM1-202ENST00000288398 C1orf127Q8N9H9 656 aa15.09■□□□□ 0.01
TPM1-202ENST00000288398 TTC16Q8NEE8 873 aa15.09■□□□□ 0.01
TPM1-202ENST00000288398 ZNF396Q96N95 335 aaPredicted RBP15.09■□□□□ 0.01
TPM1-202ENST00000288398 USP28Q96RU2 1077 aa15.09■□□□□ 0.01
TPM1-202ENST00000288398 ACBD6Q9BR61 282 aa15.09■□□□□ 0.01
TPM1-202ENST00000288398 MKNK1Q9BUB5 465 aa15.09■□□□□ 0.01
TPM1-202ENST00000288398 STRA6Q9BX79 667 aa15.09■□□□□ 0.01
TPM1-202ENST00000288398 SMG9Q9H0W8 520 aaKnown RBP15.09■□□□□ 0.01
TPM1-202ENST00000288398 ABCB6Q9NP58 842 aa15.09■□□□□ 0.01
TPM1-202ENST00000288398 RBM12Q9NTZ6 932 aaKnown RBP15.09■□□□□ 0.01
TPM1-202ENST00000288398 TSC2P49815 1807 aa15.08■□□□□ 0.01
TPM1-202ENST00000288398 F5P12259 2224 aa15.08■□□□□ 0
TPM1-202ENST00000288398 TCHHQ07283 1943 aa15.08■□□□□ 0
TPM1-202ENST00000288398 ZNF233A6NK53 670 aa15.08■□□□□ 0
TPM1-202ENST00000288398 STX6O43752 255 aa15.08■□□□□ 0
TPM1-202ENST00000288398 PRPF6O94906 941 aaKnown RBP15.08■□□□□ 0
TPM1-202ENST00000288398 CNR2P34972 360 aa15.08■□□□□ 0
TPM1-202ENST00000288398 CASP5P51878 434 aa15.08■□□□□ 0
TPM1-202ENST00000288398 NLRP12P59046 1061 aa15.08■□□□□ 0
TPM1-202ENST00000288398 GRSF1Q12849 480 aaKnown RBP eCLIP15.08■□□□□ 0
TPM1-202ENST00000288398 SIM2Q14190 667 aaPredicted RBP15.08■□□□□ 0
TPM1-202ENST00000288398 INTS6LQ5JSJ4 861 aaKnown RBP15.08■□□□□ 0
TPM1-202ENST00000288398 HEATR6Q6AI08 1181 aaKnown RBP15.08■□□□□ 0
TPM1-202ENST00000288398 CEP68Q76N32 757 aa15.08■□□□□ 0
TPM1-202ENST00000288398 SCN4BQ8IWT1 228 aa15.08■□□□□ 0
TPM1-202ENST00000288398 TOP6BLQ8N6T0 577 aa15.08■□□□□ 0
TPM1-202ENST00000288398 FSIP1Q8NA03 581 aa15.08■□□□□ 0
TPM1-202ENST00000288398 SPATA18Q8TC71 538 aa15.08■□□□□ 0
TPM1-202ENST00000288398 LEO1Q8WVC0 666 aaPredicted RBP15.08■□□□□ 0
TPM1-202ENST00000288398 CBWD1Q9BRT8 395 aa15.08■□□□□ 0
TPM1-202ENST00000288398 SLC46A2Q9BY10 475 aa15.08■□□□□ 0
TPM1-202ENST00000288398 MTMR12Q9C0I1 747 aa15.08■□□□□ 0
TPM1-202ENST00000288398 TNMDQ9H2S6 317 aa15.08■□□□□ 0
TPM1-202ENST00000288398 IL21Q9HBE4 155 aa15.08■□□□□ 0
TPM1-202ENST00000288398 PDE11AQ9HCR9 933 aa15.08■□□□□ 0
TPM1-202ENST00000288398 TRPC7Q9HCX4 862 aa15.08■□□□□ 0
TPM1-202ENST00000288398 GKN1Q9NS71 199 aa15.08■□□□□ 0
TPM1-202ENST00000288398 TDP1Q9NUW8 608 aa15.08■□□□□ 0
TPM1-202ENST00000288398 L1RE1Q9UN81 338 aa15.08■□□□□ 0
TPM1-202ENST00000288398 MORC2Q9Y6X9 1032 aaPredicted RBP15.08■□□□□ 0
TPM1-202ENST00000288398 OTOGLQ3ZCN5 2332 aa15.08■□□□□ 0
TPM1-202ENST00000288398 SOBPA7XYQ1 873 aa15.07■□□□□ 0
TPM1-202ENST00000288398 CHURC1-FNTBB4DL54 471 aa15.07■□□□□ 0
TPM1-202ENST00000288398 K7ELQ4 463 aaPredicted RBP15.07■□□□□ 0
TPM1-202ENST00000288398 ATG13O75143 517 aa15.07■□□□□ 0
TPM1-202ENST00000288398 HSP90AA1P07900 732 aaKnown RBP15.07■□□□□ 0
TPM1-202ENST00000288398 ACAT1P24752 427 aaKnown RBP15.07■□□□□ 0
TPM1-202ENST00000288398 FNTBP49356 437 aa15.07■□□□□ 0
TPM1-202ENST00000288398 ASIC1P78348 528 aa15.07■□□□□ 0
TPM1-202ENST00000288398 TNK2Q07912 1038 aa15.07■□□□□ 0
TPM1-202ENST00000288398 C4orf50Q6ZRC1 276 aa15.07■□□□□ 0
TPM1-202ENST00000288398 LONP2Q86WA8 852 aa15.07■□□□□ 0
TPM1-202ENST00000288398 CUEDC2Q9H467 287 aa15.07■□□□□ 0
TPM1-202ENST00000288398 KIAA1586Q9HCI6 787 aa15.07■□□□□ 0
TPM1-202ENST00000288398 MTMR6Q9Y217 621 aa15.07■□□□□ 0
TPM1-202ENST00000288398 FRYLO94915 3013 aa15.06■□□□□ 0
TPM1-202ENST00000288398 COL4A2P08572 1712 aa15.06■□□□□ 0
TPM1-202ENST00000288398 NUP210Q8TEM1 1887 aaPredicted RBP15.06■□□□□ 0
TPM1-202ENST00000288398 SCN1AP35498 2009 aa15.06■□□□□ 0
TPM1-202ENST00000288398 TRAV19A0A0A6YYK7 116 aa15.06■□□□□ 0
TPM1-202ENST00000288398 FRMD3A2A2Y4 597 aa15.06■□□□□ 0
TPM1-202ENST00000288398 SPTLC2O15270 562 aa15.06■□□□□ 0
TPM1-202ENST00000288398 CLSTN1O94985 981 aa15.06■□□□□ 0
TPM1-202ENST00000288398 CKMP06732 381 aa15.06■□□□□ 0
TPM1-202ENST00000288398 RETP07949 1114 aa15.06■□□□□ 0
TPM1-202ENST00000288398 TDGF1P13385 188 aa15.06■□□□□ 0
TPM1-202ENST00000288398 GPR15P49685 360 aa15.06■□□□□ 0
TPM1-202ENST00000288398 RUNX3Q13761 415 aa15.06■□□□□ 0
TPM1-202ENST00000288398 PDGFRLQ15198 375 aa15.06■□□□□ 0
TPM1-202ENST00000288398 MAPRE1Q15691 268 aaKnown RBP15.06■□□□□ 0
TPM1-202ENST00000288398 DDR2Q16832 855 aa15.06■□□□□ 0
TPM1-202ENST00000288398 DUOXA2Q1HG44 320 aa15.06■□□□□ 0
TPM1-202ENST00000288398 TXNDC8Q6A555 127 aa15.06■□□□□ 0
TPM1-202ENST00000288398 TXNDC11Q6PKC3 985 aa15.06■□□□□ 0
TPM1-202ENST00000288398 Q6ZS52 159 aa15.06■□□□□ 0
TPM1-202ENST00000288398 MON1AQ86VX9 555 aa15.06■□□□□ 0
TPM1-202ENST00000288398 CPA6Q8N4T0 437 aa15.06■□□□□ 0
TPM1-202ENST00000288398 IQUBQ8NA54 791 aa15.06■□□□□ 0
TPM1-202ENST00000288398 DHX58Q96C10 678 aa15.06■□□□□ 0
TPM1-202ENST00000288398 HPDLQ96IR7 371 aa15.06■□□□□ 0
TPM1-202ENST00000288398 LRRC3BQ96PB8 259 aa15.06■□□□□ 0
TPM1-202ENST00000288398 FNBP1Q96RU3 617 aa15.06■□□□□ 0
TPM1-202ENST00000288398 MMS19Q96T76 1030 aa15.06■□□□□ 0
TPM1-202ENST00000288398 TMLHEQ9NVH6 421 aa15.06■□□□□ 0
TPM1-202ENST00000288398 GDAP2Q9NXN4 497 aa15.06■□□□□ 0
TPM1-202ENST00000288398 DLL3Q9NYJ7 618 aa15.06■□□□□ 0
TPM1-202ENST00000288398 GTF3C4Q9UKN8 822 aa15.06■□□□□ 0
TPM1-202ENST00000288398 SLC8A2Q9UPR5 921 aa15.06■□□□□ 0
TPM1-202ENST00000288398 ANK1P16157 1881 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms