RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 THOC5Q13769 683 aaKnown RBP13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 ATP13A4Q4VNC1 1196 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 RCOR2Q8IZ40 523 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 ZSWIM2Q8NEG5 633 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 FAM49BQ9NUQ9 324 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 HAO1Q9UJM8 370 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 ARHGAP26Q9UNA1 814 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 AGAP1Q9UPQ3 857 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 SNX5Q9Y5X3 404 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 TCRBV7S2A1N4TA0A589 114 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 CCDC78A2IDD5 438 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 PDGFRAP16234 1089 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 MAP4P27816 1152 aaKnown RBP13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 GMPSP49915 693 aaPredicted RBP13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 CXCL9Q07325 125 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 AP1B1Q10567 949 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 FSCBQ5H9T9 825 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 BZW1Q7L1Q6 419 aaKnown RBP13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 CATSPER4Q7RTX7 472 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 DACH2Q96NX9 599 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 SNX25Q9H3E2 840 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 CCDC159P0C7I6 412 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 TSPY1Q01534 308 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 COBLL1Q53SF7 1204 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 HABP4Q5JVS0 413 aaKnown RBP13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 LVRNQ6Q4G3 990 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 ASNSD1Q9NWL6 643 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 ROBO3Q96MS0 1386 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 SPEF2Q9C093 1822 aa13.13□□□□□ -0.31
SLC6A1-201ENST00000287766 KCNN4O15554 427 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 NLRP11P59045 1033 aaKnown RBP13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 ROR1Q01973 937 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 PGM5Q15124 567 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 QPCTQ16769 361 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 ZNF772Q68DY9 489 aaPredicted RBP13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 STYK1Q6J9G0 422 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 SH3BP5LQ7L8J4 393 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 CCNYL1Q8N7R7 359 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 SPATA18Q8TC71 538 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 ATP6V1E2Q96A05 226 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 SAE1Q9UBE0 346 aaPredicted RBP13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 TRAPPC3O43617 180 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 SDC4P31431 198 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 TFDP2Q14188 446 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 MORF4L2Q15014 288 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 CPNE8Q86YQ8 564 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 TTC13Q8NBP0 860 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 HACL1Q9UJ83 578 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 H3BRJ5 948 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 KIAA0391O15091 583 aaKnown RBP13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 E2F6O75461 281 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 KRT4P19013 534 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 RAP1GAPP47736 663 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 MYL6P60660 151 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 SURF1Q15526 300 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 UGCGQ16739 394 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 TRIM67Q6ZTA4 783 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 RYBPQ8N488 228 aaPredicted RBP13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 HES6Q96HZ4 224 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 TIPINQ9BVW5 301 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 KLC2Q9H0B6 622 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 PXMP2Q9NR77 195 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 METTL5Q9NRN9 209 aaKnown RBP13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 XPO7Q9UIA9 1087 aaKnown RBP13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 SATB2Q9UPW6 733 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 NAALADL1Q9UQQ1 740 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 GFAPP14136 432 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 SESN2P58004 480 aaPredicted RBP13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 PPP1R2P3Q6NXS1 205 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 MCOLN2Q8IZK6 566 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 GFM2Q969S9 779 aaKnown RBP13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 PPP1R36Q96LQ0 422 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 LRRC4Q9HBW1 653 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 FAM53CQ9NYF3 392 aa13.12□□□□□ -0.31
SLC6A1-201ENST00000287766 GSTA4O15217 222 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 ATP6V1G2O95670 118 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 CLEC16AQ2KHT3 1053 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 HYIQ5T013 277 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 EME1Q96AY2 570 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 SHCBP1LQ9BZQ2 653 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 ROPN1BQ9BZX4 212 aaPredicted RBP13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 WWP1Q9H0M0 922 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 ROPN1Q9HAT0 212 aaPredicted RBP13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 NOD1Q9Y239 953 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 BCL9LQ86UU0 1499 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 DYTNA2CJ06 578 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 MAGEA13PA6NCF6 341 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 RBAK-RBAKDNI3L0D1 243 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 TXNP10599 105 aaKnown RBP13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 GCLCP48506 637 aaPredicted RBP13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 KLHL38Q2WGJ6 581 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 C11orf63Q6NUN7 778 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 C4orf19Q8IY42 314 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 KIF12Q96FN5 646 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 PCDHB18PQ96TA0 734 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 COG5Q9UP83 839 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 LCA5LO95447 670 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 ETS1P14921 441 aa13.11□□□□□ -0.31
SLC6A1-201ENST00000287766 ABCD1P33897 745 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms