RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 ITGA11Q9UKX5 1188 aa22.21■■□□□ 1.15
YBX3-202ENST00000279550 TCRBV5S1A1TA0A578 114 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 MYO1FO00160 1098 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 MGEA5O60502 916 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 CD19P15391 556 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 ECHS1P30084 290 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 TLE2Q04725 743 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 FAAP100Q0VG06 881 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 DSC3Q14574 896 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 PPP1R2P3Q6NXS1 205 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 ALKAL1Q6UXT8 129 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 NT5DC4Q86YG4 428 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 SLC13A5Q86YT5 568 aaPredicted RBP22.2■■□□□ 1.14
YBX3-202ENST00000279550 TMEM35BQ8NCS4 154 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 PAWRQ96IZ0 340 aaKnown RBP22.2■■□□□ 1.14
YBX3-202ENST00000279550 ZMAT2Q96NC0 199 aaKnown RBP22.2■■□□□ 1.14
YBX3-202ENST00000279550 TRIM51Q9BSJ1 452 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 TRAIPQ9BWF2 469 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 MCOLN1Q9GZU1 580 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 RNF39Q9H2S5 420 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 C11orf49Q9H6J7 331 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 O00370 1275 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 CILPO75339 1184 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 TAS2R40P59535 323 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 SIX1Q15475 284 aaPredicted RBP22.2■■□□□ 1.14
YBX3-202ENST00000279550 SMYD5Q6GMV2 418 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 FAXDC2Q96IV6 333 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 CNTN3Q9P232 1028 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 CYTH4Q9UIA0 394 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 SCINQ9Y6U3 715 aa22.2■■□□□ 1.14
YBX3-202ENST00000279550 PPEF2O14830 753 aa22.19■■□□□ 1.14
YBX3-202ENST00000279550 PAEPP09466 180 aa22.19■■□□□ 1.14
YBX3-202ENST00000279550 CAPN2P17655 700 aa22.19■■□□□ 1.14
YBX3-202ENST00000279550 RBP5P82980 135 aa22.19■■□□□ 1.14
YBX3-202ENST00000279550 CLUL1Q15846 466 aa22.19■■□□□ 1.14
YBX3-202ENST00000279550 CCDC26Q8TAB7 109 aa22.19■■□□□ 1.14
YBX3-202ENST00000279550 FEZF2Q8TBJ5 459 aa22.19■■□□□ 1.14
YBX3-202ENST00000279550 DDX27Q96GQ7 796 aaKnown RBP22.19■■□□□ 1.14
YBX3-202ENST00000279550 ADAM2Q99965 735 aa22.19■■□□□ 1.14
YBX3-202ENST00000279550 NEUROG2Q9H2A3 272 aa22.19■■□□□ 1.14
YBX3-202ENST00000279550 CYP3A43Q9HB55 503 aa22.19■■□□□ 1.14
YBX3-202ENST00000279550 MRPL47Q9HD33 250 aaKnown RBP22.19■■□□□ 1.14
YBX3-202ENST00000279550 RNF19AQ9NV58 838 aa22.19■■□□□ 1.14
YBX3-202ENST00000279550 PARVAQ9NVD7 372 aa22.19■■□□□ 1.14
YBX3-202ENST00000279550 PARP2Q9UGN5 583 aa22.19■■□□□ 1.14
YBX3-202ENST00000279550 DERAQ9Y315 318 aa22.19■■□□□ 1.14
YBX3-202ENST00000279550 TRIP11Q15643 1979 aa22.18■■□□□ 1.14
YBX3-202ENST00000279550 GOLGA6L10A0A0M3HER8 536 aa22.18■■□□□ 1.14
YBX3-202ENST00000279550 PHF2O75151 1096 aa22.18■■□□□ 1.14
YBX3-202ENST00000279550 CALB1P05937 261 aa22.18■■□□□ 1.14
YBX3-202ENST00000279550 SLC1A1P43005 524 aa22.18■■□□□ 1.14
YBX3-202ENST00000279550 AARSP49588 968 aaKnown RBP eCLIP22.18■■□□□ 1.14
YBX3-202ENST00000279550 RPL7AP62424 266 aaKnown RBP22.18■■□□□ 1.14
YBX3-202ENST00000279550 NNTQ13423 1086 aa22.18■■□□□ 1.14
YBX3-202ENST00000279550 LLGL1Q15334 1064 aa22.18■■□□□ 1.14
YBX3-202ENST00000279550 CYP4A22Q5TCH4 519 aa22.18■■□□□ 1.14
YBX3-202ENST00000279550 TTC27Q6P3X3 843 aa22.18■■□□□ 1.14
YBX3-202ENST00000279550 ZNF518BQ9C0D4 1074 aa22.18■■□□□ 1.14
YBX3-202ENST00000279550 HIPK3Q9H422 1215 aa22.18■■□□□ 1.14
YBX3-202ENST00000279550 TJP2Q9UDY2 1190 aa22.18■■□□□ 1.14
YBX3-202ENST00000279550 TUBGCP4Q9UGJ1 667 aa22.18■■□□□ 1.14
YBX3-202ENST00000279550 STAU1O95793 577 aaKnown RBP22.17■■□□□ 1.14
YBX3-202ENST00000279550 RARAP10276 462 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 RAB27AP51159 221 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 ZNF252P-AS1Q0IIN9 211 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 XKR4Q5GH76 650 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 MAATS1Q7Z4T9 603 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 HACE1Q8IYU2 909 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 C18orf25Q96B23 403 aaPredicted RBP22.17■■□□□ 1.14
YBX3-202ENST00000279550 HERPUD2Q9BSE4 406 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 KLK14Q9P0G3 267 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 A0A0U1RQF3 1178 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 TMEM191CA6NGB0 347 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 AGPSO00116 658 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 DAPK3O43293 454 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 NBNO60934 754 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 PTGIRP43119 386 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 OGDHQ02218 1023 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 GABPB1Q06547 395 aaPredicted RBP22.17■■□□□ 1.14
YBX3-202ENST00000279550 GPNMBQ14956 572 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 ZBTB6Q15916 424 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 PTPN20Q4JDL3 420 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 PPP1R15BQ5SWA1 713 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 ERICH1Q86X53 443 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 SEC14L1Q92503 715 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 C18orf8Q96DM3 657 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 ACBD3Q9H3P7 528 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 USTQ9Y2C2 406 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 ATP11BQ9Y2G3 1177 aa22.17■■□□□ 1.14
YBX3-202ENST00000279550 ZNF623O75123 536 aa22.16■■□□□ 1.14
YBX3-202ENST00000279550 SYF2O95926 243 aaKnown RBP22.16■■□□□ 1.14
YBX3-202ENST00000279550 DR1Q01658 176 aa22.16■■□□□ 1.14
YBX3-202ENST00000279550 CUL1Q13616 776 aa22.16■■□□□ 1.14
YBX3-202ENST00000279550 GLRA4Q5JXX5 417 aa22.16■■□□□ 1.14
YBX3-202ENST00000279550 DNAJC24Q6P3W2 148 aa22.16■■□□□ 1.14
YBX3-202ENST00000279550 NECAB2Q7Z6G3 386 aa22.16■■□□□ 1.14
YBX3-202ENST00000279550 TMEM176AQ96HP8 235 aa22.16■■□□□ 1.14
YBX3-202ENST00000279550 LHX5Q9H2C1 402 aa22.16■■□□□ 1.14
YBX3-202ENST00000279550 DPH5Q9H2P9 285 aa22.16■■□□□ 1.14
YBX3-202ENST00000279550 MEIS3P2A8K0S8 358 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms