RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 TACC1O75410 805 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 C1RP00736 705 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 RHOP08100 348 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 PTPN2P17706 415 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 ERCC5P28715 1186 aaPredicted RBP6.97□□□□□ -1.29
CD44-204ENST00000279452 HOXA9P31269 272 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 GRIK1P39086 918 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 ASPAP45381 313 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 TUFMP49411 452 aaKnown RBP6.97□□□□□ -1.29
CD44-204ENST00000279452 GPR15P49685 360 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 NDST1P52848 882 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 TYRO3Q06418 890 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 KCNH2Q12809 1159 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 SMARCB1Q12824 385 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 IFRD2Q12894 506 aaPredicted RBP6.97□□□□□ -1.29
CD44-204ENST00000279452 MAPRE1Q15691 268 aaKnown RBP6.97□□□□□ -1.29
CD44-204ENST00000279452 KLHL40Q2TBA0 621 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 ZNF394Q53GI3 561 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 CYP4A22Q5TCH4 519 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 SDHAF4Q5VUM1 108 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 FOXR2Q6PJQ5 311 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 CYP26C1Q6V0L0 522 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 C11orf57Q6ZUT1 292 aaPredicted RBP6.97□□□□□ -1.29
CD44-204ENST00000279452 OTOP3Q7RTS5 596 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 ACOT1Q86TX2 421 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 ITIH5Q86UX2 942 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 LRRTM3Q86VH5 581 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 TRIM59Q8IWR1 403 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 GJD3Q8N144 294 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 PPM1KQ8N3J5 372 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 B3GALNT2Q8NCR0 500 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 STKLD1Q8NE28 680 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 ANKRD20A12PQ8NF67 263 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 ST13P5Q8NFI4 369 aaPredicted RBP6.97□□□□□ -1.29
CD44-204ENST00000279452 SEMA4DQ92854 862 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 JAKMIP2Q96AA8 810 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 TNIP3Q96KP6 325 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 NT5C1BQ96P26 610 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 GCNAQ96QF7 691 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 LPIN3Q9BQK8 851 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 NAT10Q9H0A0 1025 aaKnown RBP6.97□□□□□ -1.29
CD44-204ENST00000279452 SDCBP2Q9H190 292 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 CRISPLD1Q9H336 500 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 THAP9Q9H5L6 903 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 SLITRK6Q9H5Y7 841 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 VRTNQ9H8Y1 702 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 APOBEC3GQ9HC16 384 aaKnown RBP6.97□□□□□ -1.29
CD44-204ENST00000279452 WDR6Q9NNW5 1121 aaKnown RBP6.97□□□□□ -1.29
CD44-204ENST00000279452 FAM49BQ9NUQ9 324 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 TMLHEQ9NVH6 421 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 GCNT4Q9P109 453 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 DNMT3BQ9UBC3 853 aaKnown RBP6.97□□□□□ -1.29
CD44-204ENST00000279452 HMGXB4Q9UGU5 601 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 MAFFQ9ULX9 164 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 MRPS23Q9Y3D9 190 aaKnown RBP6.97□□□□□ -1.29
CD44-204ENST00000279452 NFE2L3Q9Y4A8 694 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 CHD9Q3L8U1 2897 aa6.97□□□□□ -1.29
CD44-204ENST00000279452 VWA8A3KMH1 1905 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 KCNJ18B7U540 433 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 TNFRSF10AO00220 468 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 GABRDO14764 452 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 LETM1O95202 739 aaPredicted RBP6.96□□□□□ -1.3
CD44-204ENST00000279452 HAPLN1P10915 354 aaPredicted RBP6.96□□□□□ -1.3
CD44-204ENST00000279452 CCDC130P13994 396 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 GJA1P17302 382 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 PTPN1P18031 435 aaKnown RBP6.96□□□□□ -1.3
CD44-204ENST00000279452 ATF6P18850 670 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 CDK11BP21127 795 aaKnown RBP6.96□□□□□ -1.3
CD44-204ENST00000279452 BDNFP23560 247 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 CYP2F1P24903 491 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 ADORA2BP29275 332 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 YWHAEP62258 255 aaKnown RBP6.96□□□□□ -1.3
CD44-204ENST00000279452 RPL10AP62906 217 aaKnown RBP6.96□□□□□ -1.3
CD44-204ENST00000279452 MYL5Q02045 173 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 CUL2Q13617 745 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 KCNJ12Q14500 433 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 MAN2A1Q16706 1144 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 DDR2Q16832 855 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 SKOR2Q2VWA4 1001 aaPredicted RBP6.96□□□□□ -1.3
CD44-204ENST00000279452 ANO6Q4KMQ2 910 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 RBM43Q6ZSC3 357 aaKnown RBP6.96□□□□□ -1.3
CD44-204ENST00000279452 RTL10Q7L3V2 364 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 HS6ST3Q8IZP7 471 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 AOPEPQ8N6M6 819 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 TTC16Q8NEE8 873 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 ITFG1Q8TB96 612 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 MYCBPAPQ8TBZ2 947 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 TATDN2Q93075 761 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 PCED1BQ96HM7 432 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 ARID3AQ99856 593 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 CRACR2AQ9BSW2 395 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 NT5C1AQ9BXI3 368 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 INTS2Q9H0H0 1204 aaKnown RBP6.96□□□□□ -1.3
CD44-204ENST00000279452 CYP3A43Q9HB55 503 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 CRTAC1Q9NQ79 661 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 KRT82Q9NSB4 513 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 SAMSN1Q9NSI8 373 aaKnown RBP6.96□□□□□ -1.3
CD44-204ENST00000279452 TAB2Q9NYJ8 693 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 CEP72Q9P209 647 aa6.96□□□□□ -1.3
CD44-204ENST00000279452 TRIP11Q15643 1979 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms