RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 AGO4Q9HCK5 861 aaKnown RBP10.91□□□□□ -0.66
UPF3B-201ENST00000276201 SSU72Q9NP77 194 aaKnown RBP10.91□□□□□ -0.66
UPF3B-201ENST00000276201 TRIM43BA6NCK2 446 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 FOXN3O00409 490 aaPredicted RBP10.9□□□□□ -0.66
UPF3B-201ENST00000276201 CLIC2O15247 247 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 FAM13AO94988 1023 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 SNUPNO95149 360 aaKnown RBP10.9□□□□□ -0.66
UPF3B-201ENST00000276201 F2P00734 622 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 CLTBP09497 229 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 ATP4AP20648 1035 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 MARCKSL1P49006 195 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 SNRPFP62306 86 aaKnown RBP10.9□□□□□ -0.66
UPF3B-201ENST00000276201 PPARDQ03181 441 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 RBBP5Q15291 538 aaKnown RBP10.9□□□□□ -0.66
UPF3B-201ENST00000276201 EPC2Q52LR7 807 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 AP1ARQ63HQ0 302 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 PHLDB3Q6NSJ2 640 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 INTS8Q75QN2 995 aaKnown RBP10.9□□□□□ -0.66
UPF3B-201ENST00000276201 ADAT2Q7Z6V5 191 aaKnown RBP10.9□□□□□ -0.66
UPF3B-201ENST00000276201 PALB2Q86YC2 1186 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 KIF2BQ8N4N8 673 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 DENND1AQ8TEH3 1009 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 GJA10Q969M2 543 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 TRIM43Q96BQ3 446 aaPredicted RBP10.9□□□□□ -0.66
UPF3B-201ENST00000276201 TUBB6Q9BUF5 446 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 DDX23Q9BUQ8 820 aaKnown RBP10.9□□□□□ -0.66
UPF3B-201ENST00000276201 CCDC113Q9H0I3 377 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 ETNK1Q9HBU6 452 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 PRDM5Q9NQX1 630 aaPredicted RBP10.9□□□□□ -0.66
UPF3B-201ENST00000276201 AGPAT3Q9NRZ7 376 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 NINJ2Q9NZG7 142 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 NEU2Q9Y3R4 380 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 LTBP2Q14767 1821 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 FAM47DPA6NHR8 397 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 RSPH10B2B2RC85 870 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 NOP56O00567 594 aaKnown RBP10.9□□□□□ -0.66
UPF3B-201ENST00000276201 ASMTLO95671 621 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 CD4P01730 458 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 RSPH10BP0C881 870 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 PECAM1P16284 738 aaPredicted RBP10.9□□□□□ -0.66
UPF3B-201ENST00000276201 ALDH3A1P30838 453 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 PSEN2P49810 448 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 KRT17Q04695 432 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 CETN1Q12798 172 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 ANO7Q6IWH7 933 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 IRGCQ6NXR0 463 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 ZNF720Q7Z2F6 126 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 MAML1Q92585 1016 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 C16orf70Q9BSU1 422 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 SEZ6LQ9BYH1 1024 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 TRPV6Q9H1D0 765 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 PARVGQ9HBI0 331 aa10.9□□□□□ -0.66
UPF3B-201ENST00000276201 NOCTQ9UK39 431 aaKnown RBP10.9□□□□□ -0.66
UPF3B-201ENST00000276201 SMG5Q9UPR3 1016 aaKnown RBP10.9□□□□□ -0.66
UPF3B-201ENST00000276201 NFASCO94856 1347 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 HAS3O00219 553 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 KIAA0355O15063 1070 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 B4GALT4O60513 344 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 LGALS2P05162 132 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 CHRNB2P17787 502 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 ROR2Q01974 943 aaKnown RBP10.89□□□□□ -0.67
UPF3B-201ENST00000276201 RNASELQ05823 741 aaKnown RBP10.89□□□□□ -0.67
UPF3B-201ENST00000276201 MFSD10Q14728 455 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 LRRC14Q15048 493 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 TSNAXIP1Q2TAA8 658 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 PRR16Q569H4 304 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 SLC45A4Q5BKX6 768 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 ZC3H12AQ5D1E8 599 aaKnown RBP10.89□□□□□ -0.67
UPF3B-201ENST00000276201 CWF19L1Q69YN2 538 aaKnown RBP10.89□□□□□ -0.67
UPF3B-201ENST00000276201 AADACL2Q6P093 401 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 FAM71AQ8IYT1 594 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 UIMC1Q96RL1 719 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 HSD17B14Q9BPX1 270 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 EIF2AK1Q9BQI3 630 aaKnown RBP10.89□□□□□ -0.67
UPF3B-201ENST00000276201 PITPNM3Q9BZ71 974 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 MYLK2Q9H1R3 596 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 DCLRE1BQ9H816 532 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 JPH1Q9HDC5 661 aaPredicted RBP10.89□□□□□ -0.67
UPF3B-201ENST00000276201 KCNK9Q9NPC2 374 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 TBX21Q9UL17 535 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 STK38LQ9Y2H1 464 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 GSTTP1A0A1W2PQM5 241 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 LRRD1A4D1F6 860 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 NDC80O14777 642 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 GAS8O95995 478 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 ITGB8P26012 769 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 FOXN2P32314 431 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 MAGEA10P43363 369 aaPredicted RBP10.89□□□□□ -0.67
UPF3B-201ENST00000276201 CCDC142Q17RM4 750 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 TRIM50Q86XT4 487 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 EGFL6Q8IUX8 553 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 RPUSD2Q8IZ73 545 aaKnown RBP10.89□□□□□ -0.67
UPF3B-201ENST00000276201 FAM13CQ8NE31 585 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 ZNF564Q8TBZ8 553 aaPredicted RBP10.89□□□□□ -0.67
UPF3B-201ENST00000276201 SLC7A6OSQ96CW6 309 aaPredicted RBP10.89□□□□□ -0.67
UPF3B-201ENST00000276201 CCDC28BQ9BUN5 200 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 BHMT2Q9H2M3 363 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 CYLDQ9NQC7 956 aa10.89□□□□□ -0.67
UPF3B-201ENST00000276201 TRMT13Q9NUP7 481 aaKnown RBP10.89□□□□□ -0.67
UPF3B-201ENST00000276201 TMEM39AQ9NV64 488 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms