RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 JOSD2Q8TAC2 188 aa13.18□□□□□ -0.3
UBXN4-201ENST00000272638 DNAI2Q9GZS0 605 aa13.18□□□□□ -0.3
UBXN4-201ENST00000272638 ACTR5Q9H9F9 607 aaPredicted RBP13.18□□□□□ -0.3
UBXN4-201ENST00000272638 SETD4Q9NVD3 440 aa13.18□□□□□ -0.3
UBXN4-201ENST00000272638 USP15Q9Y4E8 981 aaPredicted RBP13.18□□□□□ -0.3
UBXN4-201ENST00000272638 AFG3L2Q9Y4W6 797 aa13.18□□□□□ -0.3
UBXN4-201ENST00000272638 GRIN2DO15399 1336 aa13.18□□□□□ -0.3
UBXN4-201ENST00000272638 CFAP69A5D8W1 941 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 LACTBL1A8MY62 500 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 UBOX5O94941 541 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 AKAP5P24588 427 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 CFAP157Q5JU67 520 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 TXNRD3NBQ6F5E7 133 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 MPZL3Q6UWV2 235 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 SCUBE3Q8IX30 993 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 TMEM192Q8IY95 271 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 OPTNQ96CV9 577 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 ABCF3Q9NUQ8 709 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 ERAP1Q9NZ08 941 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 SCTRP47872 440 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 PIGHQ14442 188 aaPredicted RBP13.17□□□□□ -0.3
UBXN4-201ENST00000272638 FASTKD3Q14CZ7 662 aaKnown RBP13.17□□□□□ -0.3
UBXN4-201ENST00000272638 PKN2Q16513 984 aaKnown RBP13.17□□□□□ -0.3
UBXN4-201ENST00000272638 PAN2Q504Q3 1202 aaKnown RBP13.17□□□□□ -0.3
UBXN4-201ENST00000272638 CCDC62Q6P9F0 684 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 ZNF677Q86XU0 584 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 MSL3Q8N5Y2 521 aaKnown RBP13.17□□□□□ -0.3
UBXN4-201ENST00000272638 MAP3K20Q9NYL2 800 aaKnown RBP13.17□□□□□ -0.3
UBXN4-201ENST00000272638 GPRC5DQ9NZD1 345 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 SYNPO2Q9UMS6 1093 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 MYH7BA7E2Y1 1941 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 ADCYAP1R1P41586 468 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 CAV1Q03135 178 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 STAT4Q14765 748 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 GOLGA7BQ2TAP0 167 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 TFDP3Q5H9I0 405 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 JADE1Q6IE81 842 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 LVRNQ6Q4G3 990 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 EXOC3L1Q86VI1 746 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 BRSK2Q8IWQ3 736 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 OSMRQ99650 979 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 MTFR1LQ9H019 292 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 FAM47DPA6NHR8 397 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 LYPLA2O95372 231 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 ABCD1P33897 745 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 MAP1SQ66K74 1059 aaPredicted RBP13.17□□□□□ -0.3
UBXN4-201ENST00000272638 PARP9Q8IXQ6 854 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 KIAA0319LQ8IZA0 1049 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 FBXO36Q8NEA4 188 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 MICAL1Q8TDZ2 1067 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 TEPSINQ96N21 525 aa13.17□□□□□ -0.3
UBXN4-201ENST00000272638 ABCA3Q99758 1704 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 MROH7Q68CQ1 1323 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 RGS20O76081 388 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 ARL4AP40617 200 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 TMPRSS15P98073 1019 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 PTPN11Q06124 597 aaPredicted RBP13.16□□□□□ -0.3
UBXN4-201ENST00000272638 AP1B1Q10567 949 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 LGSNQ5TDP6 509 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 ZDHHC24Q6UX98 284 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 ATP11CQ8NB49 1132 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 HIPK4Q8NE63 616 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 OR6J1Q8NGC5 347 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 RXFP2Q8WXD0 754 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 GRHL1Q9NZI5 618 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 ARHGAP28Q9P2N2 729 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 BCORQ6W2J9 1755 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 HBP1O60381 514 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 PEX5P50542 639 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 NDST1P52848 882 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 CCNG2Q16589 344 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 TMEM63BQ5T3F8 832 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 ZC3H3Q8IXZ2 948 aaKnown RBP13.16□□□□□ -0.3
UBXN4-201ENST00000272638 ANKRD13AQ8IZ07 590 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 GLIS1Q8NBF1 620 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 EXD1Q8NHP7 514 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 LRRC37BQ96QE4 947 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 UBN1Q9NPG3 1134 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 PCYOX1Q9UHG3 505 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 TMEM59LQ9UK28 342 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 LPXNO60711 386 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 PLA2G6O60733 806 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 ZC3H11AO75152 810 aaKnown RBP eCLIP13.16□□□□□ -0.3
UBXN4-201ENST00000272638 BAG2O95816 211 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 CPA2P48052 419 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 ZRSR2Q15696 482 aaKnown RBP13.16□□□□□ -0.3
UBXN4-201ENST00000272638 PRAMEF19Q5SWL8 479 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 ZNF572Q7Z3I7 529 aaPredicted RBP13.16□□□□□ -0.3
UBXN4-201ENST00000272638 CCHCR1Q8TD31 782 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 TFAP2BQ92481 460 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 STMN2Q93045 179 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 SIK2Q9H0K1 926 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 SLCO1B3Q9NPD5 702 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 WHRNQ9P202 907 aa13.16□□□□□ -0.3
UBXN4-201ENST00000272638 A0A0B4J269 797 aa13.15□□□□□ -0.3
UBXN4-201ENST00000272638 ARHGAP42A6NI28 874 aa13.15□□□□□ -0.3
UBXN4-201ENST00000272638 COPEO14579 308 aa13.15□□□□□ -0.3
UBXN4-201ENST00000272638 PSTPIP1O43586 416 aa13.15□□□□□ -0.3
UBXN4-201ENST00000272638 FARP2O94887 1054 aaPredicted RBP13.15□□□□□ -0.3
UBXN4-201ENST00000272638 C4BPAP04003 597 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms