RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 TMEM88BA6NKF7 163 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 PODXLO00592 558 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 SEPT4O43236 478 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 HSF2BPO75031 334 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 RNF40O75150 1001 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 ALDH1A1P00352 501 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 RALAP11233 206 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 RFC1P35251 1148 aaPredicted RBP17.57■□□□□ 0.4
CCDC40-201ENST00000269318 FLT3P36888 993 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 GYS2P54840 703 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 PSMC1P62191 440 aaKnown RBP17.57■□□□□ 0.4
CCDC40-201ENST00000269318 FAM193AP78312 1265 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 CAP1Q01518 475 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 PRKCZQ05513 592 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 TRIM32Q13049 653 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 PDCLQ13371 301 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 NBPF20Q3BBV1 942 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 CYP4F22Q6NT55 531 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 SMG8Q8ND04 991 aaKnown RBP17.57■□□□□ 0.4
CCDC40-201ENST00000269318 FNIP1Q8TF40 1166 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 TSPAN18Q96SJ8 248 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 RNF19AQ9NV58 838 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 VPS18Q9P253 973 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 IPPQ9Y573 584 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 GOLGA8SH3BPF8 625 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 PIRO00625 290 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 KRT3P12035 628 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 MRPS6P82932 125 aaKnown RBP17.57■□□□□ 0.4
CCDC40-201ENST00000269318 ZNF268Q14587 947 aaPredicted RBP17.57■□□□□ 0.4
CCDC40-201ENST00000269318 JOSD2Q8TAC2 188 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 C1orf54Q8WWF1 131 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 MCRS1Q96EZ8 462 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 GRHL1Q9NZI5 618 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 KLK14Q9P0G3 267 aa17.57■□□□□ 0.4
CCDC40-201ENST00000269318 ADAMTS4O75173 837 aa17.56■□□□□ 0.4
CCDC40-201ENST00000269318 CD4P01730 458 aa17.56■□□□□ 0.4
CCDC40-201ENST00000269318 PFKMP08237 780 aa17.56■□□□□ 0.4
CCDC40-201ENST00000269318 SSR1P43307 286 aaKnown RBP17.56■□□□□ 0.4
CCDC40-201ENST00000269318 KCNJ1P48048 391 aa17.56■□□□□ 0.4
CCDC40-201ENST00000269318 ATP13A4Q4VNC1 1196 aa17.56■□□□□ 0.4
CCDC40-201ENST00000269318 GDF6Q6KF10 455 aaPredicted RBP17.56■□□□□ 0.4
CCDC40-201ENST00000269318 ZDHHC24Q6UX98 284 aa17.56■□□□□ 0.4
CCDC40-201ENST00000269318 CCDC50Q8IVM0 306 aa17.56■□□□□ 0.4
CCDC40-201ENST00000269318 CCDC105Q8IYK2 499 aa17.56■□□□□ 0.4
CCDC40-201ENST00000269318 C12orf29Q8N999 325 aa17.56■□□□□ 0.4
CCDC40-201ENST00000269318 ARRDC4Q8NCT1 418 aa17.56■□□□□ 0.4
CCDC40-201ENST00000269318 WNT8BQ93098 351 aa17.56■□□□□ 0.4
CCDC40-201ENST00000269318 OSBPL8Q9BZF1 889 aa17.56■□□□□ 0.4
CCDC40-201ENST00000269318 CHST7Q9NS84 486 aa17.56■□□□□ 0.4
CCDC40-201ENST00000269318 TSPAN16Q9UKR8 245 aa17.56■□□□□ 0.4
CCDC40-201ENST00000269318 SNX24Q9Y343 169 aa17.56■□□□□ 0.4
CCDC40-201ENST00000269318 CACNB2Q08289 660 aaPredicted RBP17.55■□□□□ 0.4
CCDC40-201ENST00000269318 UAP1Q16222 522 aaPredicted RBP17.55■□□□□ 0.4
CCDC40-201ENST00000269318 SOWAHAQ2M3V2 549 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 CFAP58Q5T655 872 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 RCOR2Q8IZ40 523 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 SMC1BQ8NDV3 1235 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 UBA3Q8TBC4 463 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 LRRC45Q96CN5 670 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 DCLK3Q9C098 648 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 PARP2Q9UGN5 583 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 ADAM21Q9UKJ8 722 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 R3HDM2Q9Y2K5 976 aaKnown RBP17.55■□□□□ 0.4
CCDC40-201ENST00000269318 CDY2AQ9Y6F7 541 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 KIF3CO14782 793 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 RARBP10826 455 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 ATF7P17544 494 aaPredicted RBP17.55■□□□□ 0.4
CCDC40-201ENST00000269318 GJC1P36383 396 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 HSD17B3P37058 310 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 RPL21P46778 160 aaKnown RBP17.55■□□□□ 0.4
CCDC40-201ENST00000269318 SOX4Q06945 474 aaPredicted RBP17.55■□□□□ 0.4
CCDC40-201ENST00000269318 NFX1Q12986 1120 aaKnown RBP17.55■□□□□ 0.4
CCDC40-201ENST00000269318 STILQ15468 1287 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 PKDCCQ504Y2 493 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 TXNRD3NBQ6F5E7 133 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 TMC3Q7Z5M5 1100 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 ARFGAP1Q8N6T3 406 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 ATG4AQ8WYN0 398 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 RBM41Q96IZ5 413 aaKnown RBP17.55■□□□□ 0.4
CCDC40-201ENST00000269318 SLITRK1Q96PX8 696 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 HEMGNQ9BXL5 484 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 TXLNGYQ9BZA5 131 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 SYNCQ9H7C4 482 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 SPC25Q9HBM1 224 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 TRPV2Q9Y5S1 764 aa17.55■□□□□ 0.4
CCDC40-201ENST00000269318 CENPFP49454 3210 aa17.54■□□□□ 0.4
CCDC40-201ENST00000269318 DCAF8L1A6NGE4 600 aa17.54■□□□□ 0.4
CCDC40-201ENST00000269318 ECEL1O95672 775 aa17.54■□□□□ 0.4
CCDC40-201ENST00000269318 PSMA2P25787 234 aa17.54■□□□□ 0.4
CCDC40-201ENST00000269318 FBXO47Q5MNV8 452 aa17.54■□□□□ 0.4
CCDC40-201ENST00000269318 DPH6Q7L8W6 267 aa17.54■□□□□ 0.4
CCDC40-201ENST00000269318 LIMS2Q7Z4I7 341 aa17.54■□□□□ 0.4
CCDC40-201ENST00000269318 SERINC5Q86VE9 423 aa17.54■□□□□ 0.4
CCDC40-201ENST00000269318 UNC93AQ86WB7 457 aa17.54■□□□□ 0.4
CCDC40-201ENST00000269318 RNF25Q96BH1 459 aaPredicted RBP17.54■□□□□ 0.4
CCDC40-201ENST00000269318 FMO2Q99518 471 aa17.54■□□□□ 0.4
CCDC40-201ENST00000269318 METTL5Q9NRN9 209 aaKnown RBP17.54■□□□□ 0.4
CCDC40-201ENST00000269318 KLHL11Q9NVR0 708 aa17.54■□□□□ 0.4
CCDC40-201ENST00000269318 GDAP2Q9NXN4 497 aa17.54■□□□□ 0.4
CCDC40-201ENST00000269318 PTPN22Q9Y2R2 807 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms