RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 RAB27AP51159 221 aa14.35□□□□□ -0.11
NPC1-201ENST00000269228 NOGQ13253 232 aa14.35□□□□□ -0.11
NPC1-201ENST00000269228 TTC23LQ6PF05 361 aa14.35□□□□□ -0.11
NPC1-201ENST00000269228 ZNF571Q7Z3V5 609 aaPredicted RBP14.35□□□□□ -0.11
NPC1-201ENST00000269228 DDX27Q96GQ7 796 aaKnown RBP14.35□□□□□ -0.11
NPC1-201ENST00000269228 OLA1Q9NTK5 396 aaKnown RBP14.35□□□□□ -0.11
NPC1-201ENST00000269228 ZC3H7BQ9UGR2 993 aaKnown RBP14.35□□□□□ -0.11
NPC1-201ENST00000269228 DNAJC6O75061 913 aa14.35□□□□□ -0.11
NPC1-201ENST00000269228 SPAG7O75391 227 aa14.35□□□□□ -0.11
NPC1-201ENST00000269228 TWF1Q12792 350 aa14.35□□□□□ -0.11
NPC1-201ENST00000269228 ARHGAP15Q53QZ3 475 aa14.35□□□□□ -0.11
NPC1-201ENST00000269228 ZNF280DQ6N043 979 aa14.35□□□□□ -0.11
NPC1-201ENST00000269228 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.35□□□□□ -0.11
NPC1-201ENST00000269228 COG1Q8WTW3 980 aa14.35□□□□□ -0.11
NPC1-201ENST00000269228 RPRD1AQ96P16 312 aaPredicted RBP14.35□□□□□ -0.11
NPC1-201ENST00000269228 DUSP9Q99956 384 aaKnown RBP14.35□□□□□ -0.11
NPC1-201ENST00000269228 PORCNQ9H237 461 aa14.35□□□□□ -0.11
NPC1-201ENST00000269228 DSEQ9UL01 958 aa14.35□□□□□ -0.11
NPC1-201ENST00000269228 ASTN2O75129 1339 aaPredicted RBP14.35□□□□□ -0.11
NPC1-201ENST00000269228 LACTBL1A8MY62 500 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 RAD51CO43502 376 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 TTC4O95801 387 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 KITP10721 976 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 ACAT1P24752 427 aaKnown RBP14.34□□□□□ -0.11
NPC1-201ENST00000269228 MUM1Q2TAK8 710 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 FASTKD1Q53R41 847 aaKnown RBP14.34□□□□□ -0.11
NPC1-201ENST00000269228 TMC7Q7Z402 723 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 MAP4K3Q8IVH8 894 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 USP38Q8NB14 1042 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 SLC35C1Q96A29 364 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 CYTH2Q99418 400 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 DDX43Q9NXZ2 648 aaKnown RBP14.34□□□□□ -0.11
NPC1-201ENST00000269228 TRPV2Q9Y5S1 764 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 AKAP12Q02952 1782 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 CYP3A7-CYP3A51PA0A087WV96 503 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 GTPBP10A4D1E9 387 aaKnown RBP14.34□□□□□ -0.11
NPC1-201ENST00000269228 CYP3A7P24462 503 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 SLC25A41Q8N5S1 370 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 ATP6V0D2Q8N8Y2 350 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 IPMKQ8NFU5 416 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 ASB7Q9H672 318 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 PAK5Q9P286 719 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 PPARGC1AQ9UBK2 798 aaKnown RBP14.34□□□□□ -0.11
NPC1-201ENST00000269228 MAP3K6O95382 1288 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 ART3Q13508 389 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 LRRC14Q15048 493 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 NT5DC1Q5TFE4 455 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 FAM71DQ8N9W8 422 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 ZSWIM1Q9BR11 485 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 CKMP06732 381 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 GZMAP12544 262 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 PPP2R2AP63151 447 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 KIF19Q2TAC6 998 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 OVOS1Q6IE37 1185 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 DNAAF5Q86Y56 855 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 BRSK2Q8IWQ3 736 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 EMC1Q8N766 993 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 ZNF518BQ9C0D4 1074 aa14.34□□□□□ -0.11
NPC1-201ENST00000269228 ZWINTO95229 277 aa14.33□□□□□ -0.11
NPC1-201ENST00000269228 ESRRAP11474 423 aaPredicted RBP14.33□□□□□ -0.11
NPC1-201ENST00000269228 PDCD7Q8N8D1 485 aaKnown RBP14.33□□□□□ -0.11
NPC1-201ENST00000269228 PDGFDQ9GZP0 370 aaPredicted RBP14.33□□□□□ -0.11
NPC1-201ENST00000269228 RNF19AQ9NV58 838 aa14.33□□□□□ -0.11
NPC1-201ENST00000269228 GPATCH2LQ9NWQ4 482 aa14.33□□□□□ -0.11
NPC1-201ENST00000269228 PSMD3O43242 534 aa14.33□□□□□ -0.12
NPC1-201ENST00000269228 SLC2A3P11169 496 aa14.33□□□□□ -0.12
NPC1-201ENST00000269228 NDST1P52848 882 aa14.33□□□□□ -0.12
NPC1-201ENST00000269228 RPL10AP62906 217 aaKnown RBP14.33□□□□□ -0.12
NPC1-201ENST00000269228 STAT4Q14765 748 aa14.33□□□□□ -0.12
NPC1-201ENST00000269228 DDX42Q86XP3 938 aaKnown RBP eCLIP14.33□□□□□ -0.12
NPC1-201ENST00000269228 FAM172AQ8WUF8 416 aa14.33□□□□□ -0.12
NPC1-201ENST00000269228 SYT15Q9BQS2 421 aa14.33□□□□□ -0.12
NPC1-201ENST00000269228 ARHGAP20Q9P2F6 1191 aa14.33□□□□□ -0.12
NPC1-201ENST00000269228 KANSL3Q9P2N6 904 aa14.33□□□□□ -0.12
NPC1-201ENST00000269228 CHMP2BQ9UQN3 213 aa14.33□□□□□ -0.12
NPC1-201ENST00000269228 PARP4Q9UKK3 1724 aaKnown RBP14.33□□□□□ -0.12
NPC1-201ENST00000269228 SPDYE5A6NIY4 337 aa14.33□□□□□ -0.12
NPC1-201ENST00000269228 GOLGA8RI6L899 631 aa14.33□□□□□ -0.12
NPC1-201ENST00000269228 ASMTLO95671 621 aa14.33□□□□□ -0.12
NPC1-201ENST00000269228 SLC11A2P49281 568 aa14.33□□□□□ -0.12
NPC1-201ENST00000269228 SATB1Q01826 763 aa14.33□□□□□ -0.12
NPC1-201ENST00000269228 TBC1D1Q86TI0 1168 aaPredicted RBP14.33□□□□□ -0.12
NPC1-201ENST00000269228 SLC13A5Q86YT5 568 aaPredicted RBP14.33□□□□□ -0.12
NPC1-201ENST00000269228 PGBD3Q8N328 593 aa14.33□□□□□ -0.12
NPC1-201ENST00000269228 GLIS3Q8NEA6 775 aa14.33□□□□□ -0.12
NPC1-201ENST00000269228 MRPS31Q92665 395 aaKnown RBP14.33□□□□□ -0.12
NPC1-201ENST00000269228 FGD4Q96M96 766 aa14.33□□□□□ -0.12
NPC1-201ENST00000269228 CARD9Q9H257 536 aa14.33□□□□□ -0.12
NPC1-201ENST00000269228 AXLP30530 894 aa14.33□□□□□ -0.12
NPC1-201ENST00000269228 NUDCD3Q8IVD9 361 aa14.33□□□□□ -0.12
NPC1-201ENST00000269228 ARHGEF19Q8IW93 802 aa14.33□□□□□ -0.12
NPC1-201ENST00000269228 SENP6Q9GZR1 1112 aaPredicted RBP14.33□□□□□ -0.12
NPC1-201ENST00000269228 H0Y626 953 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 AP3B1O00203 1094 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 MAPK13O15264 365 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 MBL2P11226 248 aaPredicted RBP14.32□□□□□ -0.12
NPC1-201ENST00000269228 CDH18Q13634 790 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 NFE2Q16621 373 aaPredicted RBP14.32□□□□□ -0.12
NPC1-201ENST00000269228 FAM131BQ86XD5 332 aa14.32□□□□□ -0.12
NPC1-201ENST00000269228 PPWD1Q96BP3 646 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms