RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 OSTM1Q86WC4 334 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 CREG2Q8IUH2 290 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 MSANTD4Q8NCY6 345 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 SCLYQ96I15 445 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 RNF216Q9NWF9 866 aaPredicted RBP14.94□□□□□ -0.02
SS18-201ENST00000269137 RNF14Q9UBS8 474 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 CYTH4Q9UIA0 394 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 TSPAN16Q9UKR8 245 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 ATP11BQ9Y2G3 1177 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 TCRBV5S1A1TA0A578 114 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 B3GAT3O94766 335 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 PDGFRBP09619 1106 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 SETSIPP0DME0 302 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 GABRB2P47870 512 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 LHX1P48742 406 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 CKAP4Q07065 602 aaKnown RBP14.94□□□□□ -0.02
SS18-201ENST00000269137 TCTN1Q2MV58 587 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 PTPN20Q4JDL3 420 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 C2CD6Q53TS8 623 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 PPP1R26Q5T8A7 1209 aaPredicted RBP14.94□□□□□ -0.02
SS18-201ENST00000269137 DSTYKQ6XUX3 929 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 CRIPAKQ8N1N5 446 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 COG1Q8WTW3 980 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 RSPH1Q8WYR4 309 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 PAWRQ96IZ0 340 aaKnown RBP14.94□□□□□ -0.02
SS18-201ENST00000269137 PPP1R12CQ9BZL4 782 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 DPEP3Q9H4B8 488 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 PCDHB7Q9Y5E2 793 aa14.94□□□□□ -0.02
SS18-201ENST00000269137 EFCAB8A8MWE9 144 aa14.93□□□□□ -0.02
SS18-201ENST00000269137 M0QZQ0 153 aa14.93□□□□□ -0.02
SS18-201ENST00000269137 ZNF185O15231 689 aa14.93□□□□□ -0.02
SS18-201ENST00000269137 TADA3O75528 432 aa14.93□□□□□ -0.02
SS18-201ENST00000269137 CLTBP09497 229 aa14.93□□□□□ -0.02
SS18-201ENST00000269137 RFC2P35250 354 aa14.93□□□□□ -0.02
SS18-201ENST00000269137 TAP1Q03518 808 aa14.93□□□□□ -0.02
SS18-201ENST00000269137 PDCLQ13371 301 aa14.93□□□□□ -0.02
SS18-201ENST00000269137 MESDQ14696 234 aa14.93□□□□□ -0.02
SS18-201ENST00000269137 GOLGA7BQ2TAP0 167 aa14.93□□□□□ -0.02
SS18-201ENST00000269137 TIGD5Q53EQ6 642 aa14.93□□□□□ -0.02
SS18-201ENST00000269137 C3orf20Q8ND61 904 aa14.93□□□□□ -0.02
SS18-201ENST00000269137 LRRN4CLQ8ND94 238 aa14.93□□□□□ -0.02
SS18-201ENST00000269137 C18orf8Q96DM3 657 aa14.93□□□□□ -0.02
SS18-201ENST00000269137 PBKQ96KB5 322 aa14.93□□□□□ -0.02
SS18-201ENST00000269137 TMEM39AQ9NV64 488 aa14.93□□□□□ -0.02
SS18-201ENST00000269137 TBC1D13Q9NVG8 400 aa14.93□□□□□ -0.02
SS18-201ENST00000269137 WDR35Q9P2L0 1181 aa14.93□□□□□ -0.02
SS18-201ENST00000269137 ANAPC7Q9UJX3 599 aa14.93□□□□□ -0.02
SS18-201ENST00000269137 PACSIN2Q9UNF0 486 aaPredicted RBP14.93□□□□□ -0.02
SS18-201ENST00000269137 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.92□□□□□ -0.02
SS18-201ENST00000269137 ARHGEF37A1IGU5 675 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 MIF4GDA9UHW6 222 aaKnown RBP14.92□□□□□ -0.02
SS18-201ENST00000269137 TMEM189-UBE2V1I3L0A0 370 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 MYO1FO00160 1098 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 HOXA2O43364 376 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 HCRTO43612 131 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 DDHD2O94830 711 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 CYP11A1P05108 521 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 PFKMP08237 780 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 ODC1P11926 461 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 TUBB4BP68371 445 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 ZNF268Q14587 947 aaPredicted RBP14.92□□□□□ -0.02
SS18-201ENST00000269137 LLGL2Q6P1M3 1020 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 ZNF572Q7Z3I7 529 aaPredicted RBP14.92□□□□□ -0.02
SS18-201ENST00000269137 NECAB2Q7Z6G3 386 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 COLGALT2Q8IYK4 626 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 ANKRD52Q8NB46 1076 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 B3GALNT2Q8NCR0 500 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 UBA3Q8TBC4 463 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 FEZF2Q8TBJ5 459 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 STK32AQ8WU08 396 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 RABGGTAQ92696 567 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 RPGRIP1Q96KN7 1286 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 CPXM1Q96SM3 734 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 TMEM106CQ9BVX2 250 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 MIS12Q9H081 205 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 FAM49BQ9NUQ9 324 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 HESX1Q9UBX0 185 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 LCMT1Q9UIC8 334 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 DSEQ9UL01 958 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 CTAGE15A4D2H0 777 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 TMEM191CA6NGB0 347 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 CTAGE8P0CG41 777 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 COMTP21964 271 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 CXCR5P32302 372 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 SLC1A1P43005 524 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 LRRC26Q2I0M4 334 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 PPP1R15BQ5SWA1 713 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 DNAJC24Q6P3W2 148 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 PHLDB2Q86SQ0 1253 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 CTAGE6Q86UF2 777 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 TTC30AQ86WT1 665 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 ZNF280BQ86YH2 543 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 CTAGE4Q8IX94 777 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 ABI1Q8IZP0 508 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 SLC35F5Q8WV83 523 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 CD101Q93033 1021 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 BTBD6Q96KE9 485 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 CAPZA3Q96KX2 299 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 SUSD3Q96L08 255 aa14.92□□□□□ -0.02
SS18-201ENST00000269137 PSMB7Q99436 277 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms