RNA–Protein interactions for RNA: ENST00000264454.7

SEC22C-201, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22C, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-201ENST00000264454 PHF24Q9UPV7 400 aa10.58□□□□□ -0.72
SEC22C-201ENST00000264454 A8MXQ7 604 aa10.57□□□□□ -0.72
SEC22C-201ENST00000264454 KBTBD13C9JR72 458 aa10.57□□□□□ -0.72
SEC22C-201ENST00000264454 M0QYV0 167 aa10.57□□□□□ -0.72
SEC22C-201ENST00000264454 PTGESO14684 152 aa10.57□□□□□ -0.72
SEC22C-201ENST00000264454 RRP9O43818 475 aaKnown RBP10.57□□□□□ -0.72
SEC22C-201ENST00000264454 WARSP23381 471 aaKnown RBP10.57□□□□□ -0.72
SEC22C-201ENST00000264454 CD52P31358 61 aa10.57□□□□□ -0.72
SEC22C-201ENST00000264454 GNL1P36915 607 aaPredicted RBP10.57□□□□□ -0.72
SEC22C-201ENST00000264454 LILRA4P59901 499 aa10.57□□□□□ -0.72
SEC22C-201ENST00000264454 RNASE9P60153 205 aaKnown RBP10.57□□□□□ -0.72
SEC22C-201ENST00000264454 LPIN1Q14693 890 aa10.57□□□□□ -0.72
SEC22C-201ENST00000264454 PTPROQ16827 1216 aa10.57□□□□□ -0.72
SEC22C-201ENST00000264454 SOWAHAQ2M3V2 549 aa10.57□□□□□ -0.72
SEC22C-201ENST00000264454 PPP1R15BQ5SWA1 713 aa10.57□□□□□ -0.72
SEC22C-201ENST00000264454 DCAF12L1Q5VU92 463 aa10.57□□□□□ -0.72
SEC22C-201ENST00000264454 NIPA2Q8N8Q9 360 aa10.57□□□□□ -0.72
SEC22C-201ENST00000264454 OR6B3Q8NGW1 331 aa10.57□□□□□ -0.72
SEC22C-201ENST00000264454 SPATA18Q8TC71 538 aa10.57□□□□□ -0.72
SEC22C-201ENST00000264454 KRT35Q92764 455 aa10.57□□□□□ -0.72
SEC22C-201ENST00000264454 DDX27Q96GQ7 796 aaKnown RBP10.57□□□□□ -0.72
SEC22C-201ENST00000264454 BTBD6Q96KE9 485 aa10.57□□□□□ -0.72
SEC22C-201ENST00000264454 KRT12Q99456 494 aa10.57□□□□□ -0.72
SEC22C-201ENST00000264454 MRPL45Q9BRJ2 306 aaKnown RBP10.57□□□□□ -0.72
SEC22C-201ENST00000264454 CXCL16Q9H2A7 254 aa10.57□□□□□ -0.72
SEC22C-201ENST00000264454 TSPYL2Q9H2G4 693 aaPredicted RBP10.57□□□□□ -0.72
SEC22C-201ENST00000264454 SYNCQ9H7C4 482 aa10.57□□□□□ -0.72
SEC22C-201ENST00000264454 AGO3Q9H9G7 860 aaKnown RBP10.57□□□□□ -0.72
SEC22C-201ENST00000264454 CYLDQ9NQC7 956 aa10.57□□□□□ -0.72
SEC22C-201ENST00000264454 STARD7Q9NQZ5 370 aa10.57□□□□□ -0.72
SEC22C-201ENST00000264454 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.57□□□□□ -0.72
SEC22C-201ENST00000264454 SMARCAL1Q9NZC9 954 aa10.57□□□□□ -0.72
SEC22C-201ENST00000264454 HMGXB4Q9UGU5 601 aa10.57□□□□□ -0.72
SEC22C-201ENST00000264454 A0A1W2PQ45 241 aaPredicted RBP10.56□□□□□ -0.72
SEC22C-201ENST00000264454 A0A1W2PQY0 241 aa10.56□□□□□ -0.72
SEC22C-201ENST00000264454 ARVCFO00192 962 aa10.56□□□□□ -0.72
SEC22C-201ENST00000264454 PPEF2O14830 753 aa10.56□□□□□ -0.72
SEC22C-201ENST00000264454 SART1O43290 800 aaKnown RBP10.56□□□□□ -0.72
SEC22C-201ENST00000264454 EOMESO95936 686 aa10.56□□□□□ -0.72
SEC22C-201ENST00000264454 GHRP10912 638 aa10.56□□□□□ -0.72
SEC22C-201ENST00000264454 PYGMP11217 842 aa10.56□□□□□ -0.72
SEC22C-201ENST00000264454 KRT3P12035 628 aa10.56□□□□□ -0.72
SEC22C-201ENST00000264454 CKBP12277 381 aa10.56□□□□□ -0.72
SEC22C-201ENST00000264454 CHRNA3P32297 505 aa10.56□□□□□ -0.72
SEC22C-201ENST00000264454 SSTR3P32745 418 aaPredicted RBP10.56□□□□□ -0.72
SEC22C-201ENST00000264454 PSMC1P62191 440 aaKnown RBP10.56□□□□□ -0.72
SEC22C-201ENST00000264454 PDCLQ13371 301 aa10.56□□□□□ -0.72
SEC22C-201ENST00000264454 DHX34Q14147 1143 aaKnown RBP10.56□□□□□ -0.72
SEC22C-201ENST00000264454 PTPN20Q4JDL3 420 aa10.56□□□□□ -0.72
SEC22C-201ENST00000264454 BEND6Q5SZJ8 279 aaPredicted RBP10.56□□□□□ -0.72
SEC22C-201ENST00000264454 HDXQ7Z353 690 aa10.56□□□□□ -0.72
SEC22C-201ENST00000264454 ZDHHC17Q8IUH5 632 aa10.56□□□□□ -0.72
SEC22C-201ENST00000264454 KATNAL2Q8IYT4 538 aa10.56□□□□□ -0.72
SEC22C-201ENST00000264454 TMEM86AQ8N2M4 240 aa10.56□□□□□ -0.72
SEC22C-201ENST00000264454 MCRS1Q96EZ8 462 aa10.56□□□□□ -0.72
SEC22C-201ENST00000264454 UROC1Q96N76 676 aa10.56□□□□□ -0.72
SEC22C-201ENST00000264454 NCAPGQ9BPX3 1015 aa10.56□□□□□ -0.72
SEC22C-201ENST00000264454 GDF3Q9NR23 364 aa10.56□□□□□ -0.72
SEC22C-201ENST00000264454 HOMER3Q9NSC5 361 aa10.56□□□□□ -0.72
SEC22C-201ENST00000264454 TRMT13Q9NUP7 481 aaKnown RBP10.56□□□□□ -0.72
SEC22C-201ENST00000264454 DDX56Q9NY93 547 aaKnown RBP10.56□□□□□ -0.72
SEC22C-201ENST00000264454 TSPAN16Q9UKR8 245 aa10.56□□□□□ -0.72
SEC22C-201ENST00000264454 L1RE1Q9UN81 338 aa10.56□□□□□ -0.72
SEC22C-201ENST00000264454 FAM170AA1A519 330 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 ARHGEF37A1IGU5 675 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 FAM187AA6NFU0 413 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 ARL5CA6NH57 179 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 FSCN2O14926 492 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 INPPL1O15357 1258 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 DESP17661 470 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 MLH1P40692 756 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 LHX1P48742 406 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 COPS2P61201 443 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 SOX4Q06945 474 aaPredicted RBP10.55□□□□□ -0.72
SEC22C-201ENST00000264454 PKDCCQ504Y2 493 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 C2CD6Q53TS8 623 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 ZNF618Q5T7W0 954 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 PPP1R26Q5T8A7 1209 aaPredicted RBP10.55□□□□□ -0.72
SEC22C-201ENST00000264454 AGMOQ6ZNB7 445 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 POLNQ7Z5Q5 900 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 PHLDB2Q86SQ0 1253 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 ACOT1Q86TX2 421 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 XYLT1Q86Y38 959 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 SLC13A5Q86YT5 568 aaPredicted RBP10.55□□□□□ -0.72
SEC22C-201ENST00000264454 KLHL7Q8IXQ5 586 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 RCOR2Q8IZ40 523 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 TMEM130Q8N3G9 435 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 ANKRD52Q8NB46 1076 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 GSTCDQ8NEC7 633 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 EXD1Q8NHP7 514 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 MCEEQ96PE7 176 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 CPXM1Q96SM3 734 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 GAD1Q99259 594 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 ADAM2Q99965 735 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 AP1M1Q9BXS5 423 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 FTHL17Q9BXU8 183 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.55□□□□□ -0.72
SEC22C-201ENST00000264454 ACBD3Q9H3P7 528 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 RSAD1Q9HA92 442 aa10.55□□□□□ -0.72
SEC22C-201ENST00000264454 RNF216Q9NWF9 866 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms