RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 COBLL1Q53SF7 1204 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 DNAJC24Q6P3W2 148 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 ENDOVQ8N8Q3 282 aaKnown RBP17.04■□□□□ 0.32
GPC1-201ENST00000264039 FBXO27Q8NI29 283 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 XAB2Q9HCS7 855 aaKnown RBP17.04■□□□□ 0.32
GPC1-201ENST00000264039 TAGLN3Q9UI15 199 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 ARHGAP26Q9UNA1 814 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 RBMX2Q9Y388 322 aaKnown RBP17.04■□□□□ 0.32
GPC1-201ENST00000264039 C15orf38-AP3S2A0A0A6YYH1 394 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 A8MXQ7 604 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 MYCLP12524 364 aaPredicted RBP17.04■□□□□ 0.32
GPC1-201ENST00000264039 PTK6Q13882 451 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 PADI6Q6TGC4 694 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 ARPINQ7Z6K5 226 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 NACC1Q96RE7 527 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 HEY1Q9Y5J3 304 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 DISP2A7MBM2 1401 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 RGPD1P0DJD0 1748 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 SPATA31D3P0C874 917 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 CHN2P52757 468 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 NRF1Q16656 503 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 KBTBD12Q3ZCT8 623 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 RARS2Q5T160 578 aaKnown RBP17.04■□□□□ 0.32
GPC1-201ENST00000264039 GPATCH4Q5T3I0 446 aaKnown RBP17.04■□□□□ 0.32
GPC1-201ENST00000264039 SPATA31D4Q6ZUB0 917 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 CCDC33Q8N5R6 958 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 FAM71DQ8N9W8 422 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 EME1Q96AY2 570 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 PLEKHG4BQ96PX9 1271 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 ACCSQ96QU6 501 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 TRPV6Q9H1D0 765 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 MRPL47Q9HD33 250 aaKnown RBP17.04■□□□□ 0.32
GPC1-201ENST00000264039 PRM3Q9NNZ6 103 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 HSPBP1Q9NZL4 362 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 SLC7A8Q9UHI5 535 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 BOLA2-SMG1P6H3BVE0 249 aa17.03■□□□□ 0.32
GPC1-201ENST00000264039 IPO5O00410 1097 aaKnown RBP17.03■□□□□ 0.32
GPC1-201ENST00000264039 EML1O00423 815 aa17.03■□□□□ 0.32
GPC1-201ENST00000264039 FUT4P22083 530 aa17.03■□□□□ 0.32
GPC1-201ENST00000264039 FOLH1Q04609 750 aa17.03■□□□□ 0.32
GPC1-201ENST00000264039 RALGPS1Q5JS13 557 aa17.03■□□□□ 0.32
GPC1-201ENST00000264039 DHDDSQ86SQ9 333 aa17.03■□□□□ 0.32
GPC1-201ENST00000264039 ANKLE1Q8NAG6 615 aa17.03■□□□□ 0.32
GPC1-201ENST00000264039 SCINQ9Y6U3 715 aa17.03■□□□□ 0.32
GPC1-201ENST00000264039 CYB561D2O14569 222 aa17.03■□□□□ 0.32
GPC1-201ENST00000264039 COPAP53621 1224 aa17.03■□□□□ 0.32
GPC1-201ENST00000264039 NCKAP1LP55160 1127 aa17.03■□□□□ 0.32
GPC1-201ENST00000264039 JAM2P57087 298 aa17.03■□□□□ 0.32
GPC1-201ENST00000264039 ZNF543Q08ER8 600 aa17.03■□□□□ 0.32
GPC1-201ENST00000264039 SYDE1Q6ZW31 735 aaPredicted RBP17.03■□□□□ 0.32
GPC1-201ENST00000264039 PTAR1Q7Z6K3 402 aaPredicted RBP17.03■□□□□ 0.32
GPC1-201ENST00000264039 USP13Q92995 863 aaPredicted RBP17.03■□□□□ 0.32
GPC1-201ENST00000264039 MRPS22P82650 360 aaKnown RBP17.03■□□□□ 0.32
GPC1-201ENST00000264039 OTUD4Q01804 1114 aaKnown RBP17.03■□□□□ 0.32
GPC1-201ENST00000264039 ARMCX6Q7L4S7 300 aa17.03■□□□□ 0.32
GPC1-201ENST00000264039 TAS1R2Q8TE23 839 aa17.03■□□□□ 0.32
GPC1-201ENST00000264039 ATP2A3Q93084 1043 aa17.03■□□□□ 0.32
GPC1-201ENST00000264039 FAM213AQ9BRX8 229 aa17.03■□□□□ 0.32
GPC1-201ENST00000264039 IL1RAPL1Q9NZN1 696 aa17.03■□□□□ 0.32
GPC1-201ENST00000264039 PIK3C2AO00443 1686 aa17.02■□□□□ 0.32
GPC1-201ENST00000264039 LOC102724428A0A0B4J2F2 783 aa17.02■□□□□ 0.32
GPC1-201ENST00000264039 EEF1B2P24534 225 aaKnown RBP17.02■□□□□ 0.32
GPC1-201ENST00000264039 SIK1P57059 783 aa17.02■□□□□ 0.32
GPC1-201ENST00000264039 BST1Q10588 318 aa17.02■□□□□ 0.32
GPC1-201ENST00000264039 ORC2Q13416 577 aaPredicted RBP17.02■□□□□ 0.32
GPC1-201ENST00000264039 CDO1Q16878 200 aa17.02■□□□□ 0.32
GPC1-201ENST00000264039 SCARA5Q6ZMJ2 495 aa17.02■□□□□ 0.32
GPC1-201ENST00000264039 GPRC5CQ9NQ84 441 aa17.02■□□□□ 0.32
GPC1-201ENST00000264039 ADA2Q9NZK5 511 aa17.02■□□□□ 0.32
GPC1-201ENST00000264039 SOX13Q9UN79 622 aa17.02■□□□□ 0.32
GPC1-201ENST00000264039 AFDNP55196 1824 aaKnown RBP17.02■□□□□ 0.32
GPC1-201ENST00000264039 NAA20P61599 178 aa17.02■□□□□ 0.31
GPC1-201ENST00000264039 ANO4Q32M45 955 aa17.02■□□□□ 0.31
GPC1-201ENST00000264039 KRT39Q6A163 491 aa17.02■□□□□ 0.31
GPC1-201ENST00000264039 MFSD7Q6UXD7 560 aa17.02■□□□□ 0.31
GPC1-201ENST00000264039 DGCR14Q96DF8 476 aaKnown RBP17.02■□□□□ 0.31
GPC1-201ENST00000264039 LXNQ9BS40 222 aa17.02■□□□□ 0.31
GPC1-201ENST00000264039 VPS11Q9H270 941 aa17.02■□□□□ 0.31
GPC1-201ENST00000264039 GRID1Q9ULK0 1009 aa17.02■□□□□ 0.31
GPC1-201ENST00000264039 INPP5FQ9Y2H2 1132 aa17.02■□□□□ 0.31
GPC1-201ENST00000264039 MYH1P12882 1939 aa17.02■□□□□ 0.31
GPC1-201ENST00000264039 GOLGA8QA0A0J9YX86 632 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 GOLGA8OA6NCC3 632 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 E9PBE3 544 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 GOLGA8NF8WBI6 632 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 KLHL41O60662 606 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 CST8O60676 142 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 ART3Q13508 389 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 SESTD1Q86VW0 696 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 TMA16Q96EY4 203 aaKnown RBP17.01■□□□□ 0.31
GPC1-201ENST00000264039 OLFML3Q9NRN5 406 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 HERC5Q9UII4 1024 aaKnown RBP17.01■□□□□ 0.31
GPC1-201ENST00000264039 MSH4O15457 936 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 FAM155BO75949 473 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 OATP04181 439 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 CCNG1P51959 295 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 MARSP56192 900 aaKnown RBP17.01■□□□□ 0.31
GPC1-201ENST00000264039 MOGSQ13724 837 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 ITPRIPL1Q6GPH6 555 aa17.01■□□□□ 0.31
GPC1-201ENST00000264039 ACAD10Q6JQN1 1059 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms