RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 CISHQ9NSE2 258 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 PIK3CDO00329 1044 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 PDGFRAP16234 1089 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 CCND1P24385 295 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 TBXAS1P24557 533 aaPredicted RBP16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 TMEM62Q0P6H9 643 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 CCNG2Q16589 344 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 SMC1BQ8NDV3 1235 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 MBOAT7Q96N66 472 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 ANKEF1Q9NU02 776 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 GEMIN8Q9NWZ8 242 aaKnown RBP16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 HESX1Q9UBX0 185 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 POLIQ9UNA4 740 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 BCAR1P56945 870 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 MAP4K3Q8IVH8 894 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 PRPF31Q8WWY3 499 aaKnown RBP16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 PSPC1Q8WXF1 523 aaKnown RBP16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 CDHR1Q96JP9 859 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 GBP5Q96PP8 586 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 CEP41Q9BYV8 373 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 KIAA1586Q9HCI6 787 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 MYH1P12882 1939 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 MYH4Q9Y623 1939 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 DNAJC8O75937 253 aaPredicted RBP16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 LDHAP00338 332 aaKnown RBP16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 PRKCBP05771 671 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 MAMLD1Q13495 774 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 DEPDC1BQ8WUY9 529 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 HERPUD2Q9BSE4 406 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 DHX35Q9H5Z1 703 aaKnown RBP16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 IFT122Q9HBG6 1241 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 NOD1Q9Y239 953 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 C15orf41Q9Y2V0 281 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 LOC100653049A0A140TA62 436 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 TRIM49D1C9J1S8 452 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 KRT34O76011 436 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 ROR1Q01973 937 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 MPP2Q14168 576 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 CEP120Q8N960 986 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 LRRC19Q9H756 370 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 SLC5A4Q9NY91 659 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 MYH7BA7E2Y1 1941 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 A6NJR5 290 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 FSCN2O14926 492 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 CFLARO15519 480 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 GHRP10912 638 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 DRG2P55039 364 aaKnown RBP16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 RCN1Q15293 331 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 SWT1Q5T5J6 900 aaKnown RBP16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 FAM160B1Q5W0V3 765 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 NAIF1Q69YI7 327 aaPredicted RBP16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 C6orf89Q6UWU4 347 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 NPNTQ6UXI9 565 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 NUDCD3Q8IVD9 361 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 ARHGAP24Q8N264 748 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 DCLK2Q8N568 766 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 AGAP3Q96P47 875 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 THTPAQ9BU02 230 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 VCXQ9H320 206 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 ACAD9Q9H845 621 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 PYGBP11216 843 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 PGM1P36871 562 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 NUMBP49757 651 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 SARNPP82979 210 aaKnown RBP16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 CENPCQ03188 943 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 ECHDC2Q86YB7 292 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 OR6B3Q8NGW1 331 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 TTC8Q8TAM2 541 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 WNK4Q96J92 1243 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 ZNF317Q96PQ6 595 aaPredicted RBP16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 VPS11Q9H270 941 aa16.97■□□□□ 0.31
PDZRN3-201ENST00000263666 PLIN4Q96Q06 1357 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 B2RBV5 119 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 ZNF862O60290 1169 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 GRIN3BO60391 1043 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 UBTFL6P0CB48 400 aaPredicted RBP16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 CLCN3P51790 818 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 PTK6Q13882 451 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 C1orf146Q5VVC0 180 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 TXNRD3NBQ6F5E7 133 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 SLC9A9Q8IVB4 645 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 BORCS6Q96GS4 357 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 MANSC1Q9H8J5 431 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 DLGAP2Q9P1A6 1054 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 AVILO75366 819 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 FOXN2P32314 431 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 GAD2Q05329 585 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 XRCC4Q13426 336 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 NBPF20Q3BBV1 942 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 TRIM72Q6ZMU5 477 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 ZCCHC23Q6ZST2 131 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 PCGF5Q86SE9 256 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 MAP7D3Q8IWC1 876 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 NLRP7Q8WX94 980 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 RNF34Q969K3 372 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 ECM29Q5VYK3 1845 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 GLI3P10071 1580 aa16.96■□□□□ 0.31
PDZRN3-201ENST00000263666 CETPP11597 493 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms