RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 OSBPL9Q96SU4 736 aa24.26■■□□□ 1.47
SMARCB1-201ENST00000263121 DNAI2Q9GZS0 605 aa24.26■■□□□ 1.47
SMARCB1-201ENST00000263121 TSC2P49815 1807 aa24.26■■□□□ 1.47
SMARCB1-201ENST00000263121 SRGAP2O75044 1071 aa24.25■■□□□ 1.47
SMARCB1-201ENST00000263121 TCP1P17987 556 aaKnown RBP24.25■■□□□ 1.47
SMARCB1-201ENST00000263121 GOLGA7BQ2TAP0 167 aa24.25■■□□□ 1.47
SMARCB1-201ENST00000263121 PTPN20Q4JDL3 420 aa24.25■■□□□ 1.47
SMARCB1-201ENST00000263121 PKDCCQ504Y2 493 aa24.25■■□□□ 1.47
SMARCB1-201ENST00000263121 COLGALT2Q8IYK4 626 aa24.25■■□□□ 1.47
SMARCB1-201ENST00000263121 VWCEQ96DN2 955 aa24.25■■□□□ 1.47
SMARCB1-201ENST00000263121 TNIP3Q96KP6 325 aa24.25■■□□□ 1.47
SMARCB1-201ENST00000263121 CARD6Q9BX69 1037 aa24.25■■□□□ 1.47
SMARCB1-201ENST00000263121 FAM49BQ9NUQ9 324 aa24.25■■□□□ 1.47
SMARCB1-201ENST00000263121 PACSIN2Q9UNF0 486 aaPredicted RBP24.25■■□□□ 1.47
SMARCB1-201ENST00000263121 TTC3P53804 2025 aa24.25■■□□□ 1.47
SMARCB1-201ENST00000263121 TCRBV5S1A1TA0A578 114 aa24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 KIF4AO95239 1232 aa24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 PFKMP08237 780 aa24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 RFC2P35250 354 aa24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 MAMLD1Q13495 774 aa24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 DEFB128Q7Z7B8 93 aa24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 PHLDB2Q86SQ0 1253 aa24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 LPIN3Q9BQK8 851 aa24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 MRPL47Q9HD33 250 aaKnown RBP24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 SCINQ9Y6U3 715 aa24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 M0QZQ0 153 aa24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 LHX1P48742 406 aa24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 PDCLQ13371 301 aa24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 RPS6KA1Q15418 735 aa24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 TTC30AQ86WT1 665 aa24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 LRRN4CLQ8ND94 238 aa24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 UBA3Q8TBC4 463 aa24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 SPATA18Q8TC71 538 aa24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 CASD1Q96PB1 797 aa24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 CPXM1Q96SM3 734 aa24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 PARVAQ9NVD7 372 aa24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 AMFRQ9UKV5 643 aa24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 LRFN2Q9ULH4 789 aa24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 ALG6Q9Y672 507 aa24.24■■□□□ 1.47
SMARCB1-201ENST00000263121 MICAL3Q7RTP6 2002 aa24.23■■□□□ 1.47
SMARCB1-201ENST00000263121 TMEM189-UBE2V1I3L0A0 370 aa24.23■■□□□ 1.47
SMARCB1-201ENST00000263121 CYP11A1P05108 521 aa24.23■■□□□ 1.47
SMARCB1-201ENST00000263121 ODC1P11926 461 aa24.23■■□□□ 1.47
SMARCB1-201ENST00000263121 BRCC3P46736 316 aa24.23■■□□□ 1.47
SMARCB1-201ENST00000263121 GSCP56915 257 aaPredicted RBP24.23■■□□□ 1.47
SMARCB1-201ENST00000263121 PAN2Q504Q3 1202 aaKnown RBP24.23■■□□□ 1.47
SMARCB1-201ENST00000263121 CNKSR3Q6P9H4 555 aa24.23■■□□□ 1.47
SMARCB1-201ENST00000263121 B3GALNT2Q8NCR0 500 aa24.23■■□□□ 1.47
SMARCB1-201ENST00000263121 HES6Q96HZ4 224 aa24.23■■□□□ 1.47
SMARCB1-201ENST00000263121 ANAPC7Q9UJX3 599 aa24.23■■□□□ 1.47
SMARCB1-201ENST00000263121 STRIP2Q9ULQ0 834 aa24.23■■□□□ 1.47
SMARCB1-201ENST00000263121 UQCRHLA0A096LP55 91 aa24.22■■□□□ 1.47
SMARCB1-201ENST00000263121 ZNF185O15231 689 aa24.22■■□□□ 1.47
SMARCB1-201ENST00000263121 CTIFO43310 598 aaKnown RBP24.22■■□□□ 1.47
SMARCB1-201ENST00000263121 HOXA2O43364 376 aa24.22■■□□□ 1.47
SMARCB1-201ENST00000263121 ITGB1P05556 798 aa24.22■■□□□ 1.47
SMARCB1-201ENST00000263121 UQCRHP07919 91 aa24.22■■□□□ 1.47
SMARCB1-201ENST00000263121 SETSIPP0DME0 302 aa24.22■■□□□ 1.47
SMARCB1-201ENST00000263121 GABRB2P47870 512 aa24.22■■□□□ 1.47
SMARCB1-201ENST00000263121 MESDQ14696 234 aa24.22■■□□□ 1.47
SMARCB1-201ENST00000263121 PTPROQ16827 1216 aa24.22■■□□□ 1.47
SMARCB1-201ENST00000263121 NPAS4Q8IUM7 802 aa24.22■■□□□ 1.47
SMARCB1-201ENST00000263121 ABI1Q8IZP0 508 aa24.22■■□□□ 1.47
SMARCB1-201ENST00000263121 MSANTD4Q8NCY6 345 aa24.22■■□□□ 1.47
SMARCB1-201ENST00000263121 COG1Q8WTW3 980 aa24.22■■□□□ 1.47
SMARCB1-201ENST00000263121 RSPH1Q8WYR4 309 aa24.22■■□□□ 1.47
SMARCB1-201ENST00000263121 BTBD6Q96KE9 485 aa24.22■■□□□ 1.47
SMARCB1-201ENST00000263121 SUSD3Q96L08 255 aa24.22■■□□□ 1.47
SMARCB1-201ENST00000263121 DDX43Q9NXZ2 648 aaKnown RBP24.22■■□□□ 1.47
SMARCB1-201ENST00000263121 I3L4J1 428 aa24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 KIAA0355O15063 1070 aa24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 CCDC130P13994 396 aa24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 RNASELQ05823 741 aaKnown RBP24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 CYP4A22Q5TCH4 519 aa24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 CREG2Q8IUH2 290 aa24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 CEP112Q8N8E3 955 aa24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 C3orf20Q8ND61 904 aa24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 MNS1Q8NEH6 495 aa24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 HASPINQ8TF76 798 aa24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 UBE2Q2Q8WVN8 375 aa24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 PSMB7Q99436 277 aa24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 TRIM7Q9C029 511 aa24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 RNF216Q9NWF9 866 aaPredicted RBP24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 HESX1Q9UBX0 185 aa24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 TJP2Q9UDY2 1190 aa24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 TIMM13Q9Y5L4 95 aaPredicted RBP24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 F8W810 466 aa24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 ERBB2P04626 1255 aa24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 PTPN1P18031 435 aaKnown RBP24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 CXCR5P32302 372 aa24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 GATMP50440 423 aa24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 PSMC1P62191 440 aaKnown RBP24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 PPP1R15BQ5SWA1 713 aa24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 KIAA0319Q5VV43 1072 aa24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 C18orf8Q96DM3 657 aa24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 DSEQ9UL01 958 aa24.21■■□□□ 1.47
SMARCB1-201ENST00000263121 TRIM43BA6NCK2 446 aa24.2■■□□□ 1.46
SMARCB1-201ENST00000263121 TMEM110-MUSTN1A8MSY1 372 aa24.2■■□□□ 1.46
SMARCB1-201ENST00000263121 CES2O00748 559 aa24.2■■□□□ 1.46
SMARCB1-201ENST00000263121 ATP2C2O75185 946 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms