RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 RNF19BQ6ZMZ0 732 aa17.71■□□□□ 0.43
CHCHD3-201ENST00000262570 ACOT1Q86TX2 421 aa17.71■□□□□ 0.43
CHCHD3-201ENST00000262570 SLC4A11Q8NBS3 891 aa17.71■□□□□ 0.43
CHCHD3-201ENST00000262570 B3GALNT2Q8NCR0 500 aa17.71■□□□□ 0.43
CHCHD3-201ENST00000262570 MYCBPAPQ8TBZ2 947 aa17.71■□□□□ 0.43
CHCHD3-201ENST00000262570 SLC22A17Q8WUG5 538 aa17.71■□□□□ 0.43
CHCHD3-201ENST00000262570 TMEM176AQ96HP8 235 aa17.71■□□□□ 0.43
CHCHD3-201ENST00000262570 STK33Q9BYT3 514 aa17.71■□□□□ 0.43
CHCHD3-201ENST00000262570 TRIM5Q9C035 493 aa17.71■□□□□ 0.43
CHCHD3-201ENST00000262570 TMLHEQ9NVH6 421 aa17.71■□□□□ 0.43
CHCHD3-201ENST00000262570 AFF4Q9UHB7 1163 aaKnown RBP17.71■□□□□ 0.43
CHCHD3-201ENST00000262570 PCDHB4Q9Y5E5 795 aa17.71■□□□□ 0.43
CHCHD3-201ENST00000262570 HCFC2Q9Y5Z7 792 aa17.71■□□□□ 0.43
CHCHD3-201ENST00000262570 RNF225M0QZC1 329 aaPredicted RBP17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 FOXN3O00409 490 aaPredicted RBP17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 GLUD1P00367 558 aa17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 RAPGEF1Q13905 1077 aa17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 DRAP1Q14919 205 aaPredicted RBP17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 MAPRE1Q15691 268 aaKnown RBP17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 NFE2Q16621 373 aaPredicted RBP17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 CCDC142Q17RM4 750 aa17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 LPIN3Q9BQK8 851 aa17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 GPR88Q9GZN0 384 aa17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 FSD2A1L4K1 749 aa17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 MTMR11A4FU01 709 aa17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 VNN2O95498 520 aa17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 TRIM21P19474 475 aaKnown RBP17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 ZNF132P52740 706 aa17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 ADCY1Q08828 1119 aa17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 FIGNQ5HY92 759 aa17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 EFHBQ8N7U6 833 aa17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 C12orf29Q8N999 325 aa17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 ATAD1Q8NBU5 361 aa17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 PCED1BQ96HM7 432 aa17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 PGLYRP2Q96PD5 576 aa17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 TTYH3Q9C0H2 523 aa17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 IGFLR1Q9H665 355 aa17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 NLRC4Q9NPP4 1024 aa17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 CEP72Q9P209 647 aa17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 MAFFQ9ULX9 164 aa17.7■□□□□ 0.42
CHCHD3-201ENST00000262570 PAEPP09466 180 aa17.69■□□□□ 0.42
CHCHD3-201ENST00000262570 SPATA31D3P0C874 917 aa17.69■□□□□ 0.42
CHCHD3-201ENST00000262570 EPCAMP16422 314 aa17.69■□□□□ 0.42
CHCHD3-201ENST00000262570 MDH1BQ5I0G3 518 aa17.69■□□□□ 0.42
CHCHD3-201ENST00000262570 SPATA31D4Q6ZUB0 917 aa17.69■□□□□ 0.42
CHCHD3-201ENST00000262570 FAM71AQ8IYT1 594 aa17.69■□□□□ 0.42
CHCHD3-201ENST00000262570 MICALL1Q8N3F8 863 aa17.69■□□□□ 0.42
CHCHD3-201ENST00000262570 RBBP8NLQ8NC74 664 aaPredicted RBP17.69■□□□□ 0.42
CHCHD3-201ENST00000262570 VN1R2Q8NFZ6 395 aa17.69■□□□□ 0.42
CHCHD3-201ENST00000262570 C2orf15Q8WU43 125 aaKnown RBP17.69■□□□□ 0.42
CHCHD3-201ENST00000262570 HEXIM2Q96MH2 286 aaKnown RBP17.69■□□□□ 0.42
CHCHD3-201ENST00000262570 DNAI2Q9GZS0 605 aa17.69■□□□□ 0.42
CHCHD3-201ENST00000262570 FBXW11Q9UKB1 542 aa17.69■□□□□ 0.42
CHCHD3-201ENST00000262570 ITIH6Q6UXX5 1313 aa17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 F8VZ95 297 aa17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 NCK2O43639 380 aa17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 KRT5P13647 590 aa17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 CDR1P51861 262 aa17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 JAM2P57087 298 aa17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 RBM10P98175 930 aaKnown RBP17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 ADAM15Q13444 863 aa17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 COL19A1Q14993 1142 aa17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 CTC1Q2NKJ3 1217 aa17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 CFAP221Q4G0U5 840 aa17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 TMEM184AQ6ZMB5 413 aa17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 C4orf50Q6ZRC1 276 aa17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 VSTM4Q8IW00 320 aa17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 TCEAL8Q8IYN2 117 aa17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 KREMEN2Q8NCW0 462 aa17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 SPPL2BQ8TCT7 592 aa17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 HDAC7Q8WUI4 952 aa17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 MYLPFQ96A32 169 aa17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 FUBP3Q96I24 572 aaKnown RBP eCLIP17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 NUP58Q9BVL2 599 aa17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 CRISPLD1Q9H336 500 aa17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 PLEKHA4Q9H4M7 779 aa17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 HSFX1Q9UBD0 423 aa17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 PCDHB5Q9Y5E4 795 aa17.68■□□□□ 0.42
CHCHD3-201ENST00000262570 SEC24AO95486 1093 aa17.67■□□□□ 0.42
CHCHD3-201ENST00000262570 GLP2RO95838 553 aa17.67■□□□□ 0.42
CHCHD3-201ENST00000262570 PNMA6AP0CW24 399 aaPredicted RBP17.67■□□□□ 0.42
CHCHD3-201ENST00000262570 USP8P40818 1118 aa17.67■□□□□ 0.42
CHCHD3-201ENST00000262570 DUSP4Q13115 394 aa17.67■□□□□ 0.42
CHCHD3-201ENST00000262570 SPECC1LQ69YQ0 1117 aa17.67■□□□□ 0.42
CHCHD3-201ENST00000262570 LLGL2Q6P1M3 1020 aa17.67■□□□□ 0.42
CHCHD3-201ENST00000262570 PAQR9Q6ZVX9 377 aa17.67■□□□□ 0.42
CHCHD3-201ENST00000262570 CACNA2D4Q7Z3S7 1137 aa17.67■□□□□ 0.42
CHCHD3-201ENST00000262570 SPATA2LQ8IUW3 424 aaPredicted RBP17.67■□□□□ 0.42
CHCHD3-201ENST00000262570 MRFAP1L1Q96HT8 127 aa17.67■□□□□ 0.42
CHCHD3-201ENST00000262570 SPAG5Q96R06 1193 aa17.67■□□□□ 0.42
CHCHD3-201ENST00000262570 B3GNT5Q9BYG0 378 aa17.67■□□□□ 0.42
CHCHD3-201ENST00000262570 EDEM3Q9BZQ6 932 aa17.67■□□□□ 0.42
CHCHD3-201ENST00000262570 ABCB6Q9NP58 842 aa17.67■□□□□ 0.42
CHCHD3-201ENST00000262570 FAM49BQ9NUQ9 324 aa17.67■□□□□ 0.42
CHCHD3-201ENST00000262570 ABI2Q9NYB9 513 aaPredicted RBP17.67■□□□□ 0.42
CHCHD3-201ENST00000262570 DPP7Q9UHL4 492 aa17.67■□□□□ 0.42
CHCHD3-201ENST00000262570 KIAA1257Q9ULG3 409 aa17.67■□□□□ 0.42
CHCHD3-201ENST00000262570 SPTBN5Q9NRC6 3674 aaKnown RBP17.67■□□□□ 0.42
CHCHD3-201ENST00000262570 XIRP2A4UGR9 3374 aa17.66■□□□□ 0.42
CHCHD3-201ENST00000262570 LINC01565O15544 149 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms